; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000504 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000504
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMuDRA-like transposase
Genome locationscaffold8:48261574..48267245
RNA-Seq ExpressionSpg000504
SyntenySpg000504
Gene Ontology termsGO:0009987 - cellular process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027453.1 hypothetical protein SDJN02_11466 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-1865.56Show/hide
Query:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY
        +QPKKKNPP IE + TIS ISS NPI+KLQERIIKLQQI    S +   TT   E K+KE++D  LTW+SKAMAESLDEIS +ISWGF +
Subjt:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY

XP_022157216.1 uncharacterized protein LOC111023978 [Momordica charantia]2.9e-1852.44Show/hide
Query:  IYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSMRN
        IYPVD+  + VH+  + F VNI + +C  ++WD+D IPC+HAC+AI  +GL + SFVH+FYH   LQ +YS NVHPIG + N
Subjt:  IYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSMRN

XP_022966437.1 uncharacterized protein LOC111466089 [Cucurbita maxima]1.1e-1762.22Show/hide
Query:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY
        +Q KKKNPP IE++ TIS ISS NPI+KLQERIIKLQQI+N+   T       ++ +KKE++D  LTW+SKAMAESLDEIS +ISWGF +
Subjt:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY

XP_023517459.1 uncharacterized protein LOC111781218 isoform X1 [Cucurbita pepo subsp. pepo]1.4e-1762.22Show/hide
Query:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY
        +Q KKKNPP IE++ TIS ISS NPI+KLQERIIKLQQI++T   T       ++ +KKE++D  LTW+SKAMAESLDEIS +ISWGF +
Subjt:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY

XP_023517463.1 uncharacterized protein LOC111781218 isoform X4 [Cucurbita pepo subsp. pepo]1.4e-1762.22Show/hide
Query:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY
        +Q KKKNPP IE++ TIS ISS NPI+KLQERIIKLQQI++T   T       ++ +KKE++D  LTW+SKAMAESLDEIS +ISWGF +
Subjt:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY

TrEMBL top hitse value%identityAlignment
A0A5D3CDB8 Uncharacterized protein3.4e-1745.83Show/hide
Query:  MLRKSAPGTSPSSLNQIYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSM
        M+R+S    + S    IYPVD+ +F+VH + +QF VNI NR+C+CR+WDLDLIPC+HAC+A+  + L +  +  +FY+ SNL  +Y     PIG++
Subjt:  MLRKSAPGTSPSSLNQIYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSM

A0A5D3E198 MuDRA-like transposase3.4e-1745.83Show/hide
Query:  MLRKSAPGTSPSSLNQIYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSM
        M+R+S    + S    IYPVD+ +F+VH + +QF VNI NR+C+CR+WDLDLIPC+HAC+A+  + L +  +  +FY+ SNL  +Y     PIG++
Subjt:  MLRKSAPGTSPSSLNQIYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSM

A0A6J1DXB4 uncharacterized protein LOC1110239781.4e-1852.44Show/hide
Query:  IYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSMRN
        IYPVD+  + VH+  + F VNI + +C  ++WD+D IPC+HAC+AI  +GL + SFVH+FYH   LQ +YS NVHPIG + N
Subjt:  IYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSMRN

A0A6J1EE78 uncharacterized protein LOC1114324292.6e-1762.22Show/hide
Query:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY
        +QPKKKNPP IE + TIS ISS NPI+KLQERIIKLQQI+++   T        + K+KE++D  LTW+SKAMAESLDEIS +ISWGF +
Subjt:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY

A0A6J1HMZ3 uncharacterized protein LOC1114660895.3e-1862.22Show/hide
Query:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY
        +Q KKKNPP IE++ TIS ISS NPI+KLQERIIKLQQI+N+   T       ++ +KKE++D  LTW+SKAMAESLDEIS +ISWGF +
Subjt:  RQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCGAAAATCCGCTCCCGGCACGTCTCCTAGCTCTCTGAATCAAATATACCCTGTTGATAGAGTGCAGTTCCAAGTCCATGATAAATGCAAGCAATTCGAAGTAAA
TATCAGCAATCGGAGTTGCACGTGTAGGAGGTGGGATTTAGATCTTATCCCATGCGCCCATGCATGCATGGCTATTCGCCACAAGGGGTTGGGCATCGATTCATTTGTCC
ATGAGTTTTACCACAACTCAAACCTCCAAAAGATGTACAGTGCAAACGTTCATCCTATTGGATCGATGAGGAATGATTCAGTCTCAACAACAGCTGAGACCATTGGGGGC
CAAGGTGTGGAATTGTTGTTCTTGGTATGGTATGAGGTCCTTCCTATTGTTAGGCAGCCAAAGAAGAAGAATCCACCAGTAATCGAAGAGGACACAACAATCTCCACGAT
CTCCTCCTTCAACCCAATTACGAAATTACAGGAACGAATCATAAAGTTGCAGCAGATCAACAACACTCAATCAGAAACCAAGCCATCAACAACAGCAATATTGGAGATCA
AGAAGAAGGAAGAAGACGATCTGCCATTGACGTGGAAAAGCAAGGCCATGGCGGAGAGCTTGGATGAAATCTCAAAAGAAATCTCATGGGGCTTCAACTACAGAAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCGAAAATCCGCTCCCGGCACGTCTCCTAGCTCTCTGAATCAAATATACCCTGTTGATAGAGTGCAGTTCCAAGTCCATGATAAATGCAAGCAATTCGAAGTAAA
TATCAGCAATCGGAGTTGCACGTGTAGGAGGTGGGATTTAGATCTTATCCCATGCGCCCATGCATGCATGGCTATTCGCCACAAGGGGTTGGGCATCGATTCATTTGTCC
ATGAGTTTTACCACAACTCAAACCTCCAAAAGATGTACAGTGCAAACGTTCATCCTATTGGATCGATGAGGAATGATTCAGTCTCAACAACAGCTGAGACCATTGGGGGC
CAAGGTGTGGAATTGTTGTTCTTGGTATGGTATGAGGTCCTTCCTATTGTTAGGCAGCCAAAGAAGAAGAATCCACCAGTAATCGAAGAGGACACAACAATCTCCACGAT
CTCCTCCTTCAACCCAATTACGAAATTACAGGAACGAATCATAAAGTTGCAGCAGATCAACAACACTCAATCAGAAACCAAGCCATCAACAACAGCAATATTGGAGATCA
AGAAGAAGGAAGAAGACGATCTGCCATTGACGTGGAAAAGCAAGGCCATGGCGGAGAGCTTGGATGAAATCTCAAAAGAAATCTCATGGGGCTTCAACTACAGAAGTTAA
Protein sequenceShow/hide protein sequence
MLRKSAPGTSPSSLNQIYPVDRVQFQVHDKCKQFEVNISNRSCTCRRWDLDLIPCAHACMAIRHKGLGIDSFVHEFYHNSNLQKMYSANVHPIGSMRNDSVSTTAETIGG
QGVELLFLVWYEVLPIVRQPKKKNPPVIEEDTTISTISSFNPITKLQERIIKLQQINNTQSETKPSTTAILEIKKKEEDDLPLTWKSKAMAESLDEISKEISWGFNYRS