; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000557 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000557
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor TCP7
Genome locationscaffold8:45480176..45480715
RNA-Seq ExpressionSpg000557
SyntenySpg000557
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsIPR005333 - Transcription factor, TCP
IPR017887 - Transcription factor TCP subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004145813.1 transcription factor TCP7 [Cucumis sativus]4.1e-7988.95Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVK+ TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLP
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        GC +P DPSSSN  STTTS FEE+T  GNNYAFPM NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETEDDDD
Subjt:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

XP_008465370.1 PREDICTED: transcription factor TCP7 [Cucumis melo]5.9e-7888.4Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVKK TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLP
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        GC +P DPSSSN  STTTS FEE+T  GNNYAFP  NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETED DD
Subjt:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

XP_022140679.1 transcription factor TCP15-like [Momordica charantia]4.5e-7082.32Show/hide
Query:  MRVKKATSNSPRNAPKSNSQ--NASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALD
        MRVKKATS+SPRNAPKSNS   NASESK +PSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAAL+
Subjt:  MRVKKATSNSPRNAPKSNSQ--NASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALD

Query:  LPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        L  C PS PSSSN S TTSCF+++T   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN E++   D D
Subjt:  LPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

XP_022996075.1 transcription factor TCP14-like [Cucurbita maxima]5.3e-7182.58Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVKKATSNSPR  P     NASESK IPSKA KDRHAKV GRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAA +L 
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD
        GC+P+DPSSS  +TTT+    KTFDGNNYAFP  +E++PLPNYEFDLVSDFDMELFAHHI TLQEVAENSERE EDDD
Subjt:  GCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD

XP_038900506.1 transcription factor TCP16-like [Benincasa hispida]1.4e-8292.22Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        M+VKKATSNSPRNAPK NS NASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASA LDLP
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GCRPSDP-SSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        GC+P DP SSSN STTT+ FEE TFDGNNYAFPMANE IPLPNYEFDLVSDFDMELFAHHIA LQEVAENSERETEDDDD
Subjt:  GCRPSDP-SSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

TrEMBL top hitse value%identityAlignment
A0A0A0KDC7 TCP domain-containing protein2.0e-7988.95Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVK+ TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLP
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        GC +P DPSSSN  STTTS FEE+T  GNNYAFPM NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETEDDDD
Subjt:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

A0A1S3CNQ2 transcription factor TCP72.9e-7888.4Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVKK TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLP
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        GC +P DPSSSN  STTTS FEE+T  GNNYAFP  NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETED DD
Subjt:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

A0A5A7T0X8 Transcription factor TCP72.9e-7888.4Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVKK TSNSPRNAPK NS  ASESK+IPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASA LDLP
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        GC +P DPSSSN  STTTS FEE+T  GNNYAFP  NE IPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE+ETED DD
Subjt:  GC-RPSDPSSSNF-STTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

A0A6J1CGC4 transcription factor TCP15-like2.2e-7082.32Show/hide
Query:  MRVKKATSNSPRNAPKSNSQ--NASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALD
        MRVKKATS+SPRNAPKSNS   NASESK +PSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAAL+
Subjt:  MRVKKATSNSPRNAPKSNSQ--NASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALD

Query:  LPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD
        L  C PS PSSSN S TTSCF+++T   NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN E++   D D
Subjt:  LPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD

A0A6J1K5P6 transcription factor TCP14-like2.6e-7182.58Show/hide
Query:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP
        MRVKKATSNSPR  P     NASESK IPSKA KDRHAKV GRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGKDIASAA +L 
Subjt:  MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLP

Query:  GCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD
        GC+P+DPSSS  +TTT+    KTFDGNNYAFP  +E++PLPNYEFDLVSDFDMELFAHHI TLQEVAENSERE EDDD
Subjt:  GCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDD

SwissProt top hitse value%identityAlignment
Q53PH2 Transcription factor PCF33.8e-1976.79Show/hide
Query:  KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        KDRH KV GR RRIR+P LCAARVFQLTRELG+KTDG+T+EWLL++AEP+I+A TG
Subjt:  KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

Q93Z00 Transcription factor TCP142.9e-1944.29Show/hide
Query:  KATSNSPRNAPKSNSQNASESKVIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG-----KDI
        ++  + P+   K   Q   ES V+ +K P       KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEPS+IA TG      + 
Subjt:  KATSNSPRNAPKSNSQNASESKVIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG-----KDI

Query:  ASAALDLPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFP
         S  + L     S    S+F +  S     TF  NN   P
Subjt:  ASAALDLPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFP

Q9FMX2 Transcription factor TCP71.7e-1965.28Show/hide
Query:  SKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA
        S V+     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     A+
Subjt:  SKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA

Q9FTA2 Transcription factor TCP212.2e-1953.93Show/hide
Query:  SQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDP
        + N      +     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     A+        S P
Subjt:  SQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDP

Q9LSD5 Transcription factor TCP201.1e-1857.83Show/hide
Query:  PKSNSQNASESKVIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA
        P   SQN  ++++ P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++WLL++AEPSIIA TG     A+
Subjt:  PKSNSQNASESKVIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA

Arabidopsis top hitse value%identityAlignment
AT1G58100.1 TCP family transcription factor1.0e-1954.95Show/hide
Query:  VKKATSNSPRNAPKSNSQNASESKVIPS----KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG
        V  + S  PR+ P  +S  A+ S    +    ++ KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG
Subjt:  VKKATSNSPRNAPKSNSQNASESKVIPS----KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG

AT3G27010.1 TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 207.8e-2057.83Show/hide
Query:  PKSNSQNASESKVIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA
        P   SQN  ++++ P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++WLL++AEPSIIA TG     A+
Subjt:  PKSNSQNASESKVIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA

AT3G47620.1 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 142.1e-2044.29Show/hide
Query:  KATSNSPRNAPKSNSQNASESKVIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG-----KDI
        ++  + P+   K   Q   ES V+ +K P       KDRH KV GR RRIR+P LCAARVFQLTRELG+K+DG+T+EWLL++AEPS+IA TG      + 
Subjt:  KATSNSPRNAPKSNSQNASESKVIPSKAP-------KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG-----KDI

Query:  ASAALDLPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFP
         S  + L     S    S+F +  S     TF  NN   P
Subjt:  ASAALDLPGCRPSDPSSSNFSTTTSCFEEKTFDGNNYAFP

AT5G08330.1 TCP family transcription factor1.6e-2053.93Show/hide
Query:  SQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDP
        + N      +     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     A+        S P
Subjt:  SQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDP

AT5G23280.1 TCP family transcription factor1.2e-2065.28Show/hide
Query:  SKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA
        S V+     KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++AEPSIIA TG     A+
Subjt:  SKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCA
TGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGG
AGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCA
AACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTT
GGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGTCAAGAAGGCTACATCAAACTCCCCAAGAAATGCACCAAAATCCAATTCACAAAATGCCTCAGAGTCTAAGGTCATCCCTTCTAAAGCTCCGAAAGATCGCCA
TGCCAAGGTTCACGGGCGCGATCGACGTATCCGCCTTCCTCCATTGTGTGCAGCTCGTGTGTTTCAACTAACTCGCGAGCTCGGAAACAAAACAGATGGTCAAACTGTGG
AGTGGCTGTTGAAGAAAGCTGAGCCATCCATTATTGCTCTAACTGGTAAAGATATTGCCTCTGCTGCTTTAGACTTGCCTGGCTGCAGACCTTCTGATCCATCTTCATCA
AACTTTTCTACTACTACAAGTTGTTTTGAAGAAAAAACTTTTGATGGAAACAACTATGCATTCCCAATGGCTAACGAACGCATACCTTTGCCAAATTATGAATTCGATTT
GGTCTCGGATTTTGATATGGAACTTTTCGCTCATCATATCGCCACGCTTCAAGAAGTGGCAGAAAACTCCGAGAGAGAAACTGAGGACGACGACGACTGA
Protein sequenceShow/hide protein sequence
MRVKKATSNSPRNAPKSNSQNASESKVIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASAALDLPGCRPSDPSSS
NFSTTTSCFEEKTFDGNNYAFPMANERIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSERETEDDDD