CuGenDBv2

Gene ID	Spg000578
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	scarecrow-like transcription factor 11 (SCL11)
Genome location	scaffold8:44366338..44368918
RNA-Seq Expression	Spg000578
Synteny	Spg000578
Gene Ontology terms	GO:0000460 - maturation of 5.8S rRNA (biological process)
InterPro domains	IPR019324 - M-phase phosphoprotein 6

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570693.1 hypothetical protein SDJN03_29608, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-82

87.23

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRA Q+EEQPKKEEEVK DENFFPSSTIIRKCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEEVASLGQ EIPGSSSGNHSGN
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSR++GSS+NEA CSNIDEKN EAN DLKRKQSEVVS+GRHPTK P+SGRDNQQ SF++GKG  KKPKGEKLDW VLRPSK+PNKSG
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

XP_022943952.1 uncharacterized protein LOC111448524 isoform X2 [Cucurbita moschata]

7.1e-82

85.64

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRA Q+E+QPK+EEEVK DENFFPSSTIIRKCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEE+ASLGQ EIPGSSSGNHSGN
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSR++GSS+NEA CSNIDEKN EAN DLKRKQSEVVS+GRHPTK P+SGRDNQQ SF++GKG  KKPKGEKLDW VLRPSK+PNKSG
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

XP_022947916.1 uncharacterized protein LOC111451657 [Cucurbita moschata]

7.1e-82

87.77

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK +EN FPSS IIRKCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E P  SSGNHS N
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSRE+GSSRNEAV SN DEKN E NGDLKRKQSEVVSEGRHPTK PKSGRDNQQ SFNNGKGFFKKPKGE LDW VLRPSK+PNK G
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

XP_023512013.1 uncharacterized protein LOC111776852 isoform X2 [Cucurbita pepo subsp. pepo]

1.2e-81

86.17

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRA Q+EEQPKKEEEVK DENFFPSSTIIRKCVVLVEG PHPGA KGRMSFQSFNPSID+LNEEVASLGQ EIPGSSSGNHSGN
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSR++GSS+NE +CSNIDEKN EAN DLKRKQSEVVS+GRHPTK P+SGRDNQQ SF++GKG  KKPKGEKLDW VLRPSK+PNKSG
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

XP_023532308.1 uncharacterized protein LOC111794500 isoform X1 [Cucurbita pepo subsp. pepo]

1.9e-82

88.3

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK +EN FPSS IIRKCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E P SSSGNHS N
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSRE+GSSRNEAV SN DEKN E NGDLKRKQSEVVSEGRHPTK PKSGRDNQQ SFNNGKGFFKKPKGE LDW VLRPSK+PNK G
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D3R3 uncharacterized protein LOC111016990

8.7e-78

83.33

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRAAQ+EEQP KEEEVK DE+FFPSS+II+KCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQE+P SSSGNHSGN
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSE----GRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSRE+GSS+NEAVCSNI E + EANGDLKRKQSEVV E     +H TK  KS RDNQQPSFNNGK  FKKPKG KLDW VLRPSK+PNKSG
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSE----GRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

A0A6J1FT40 uncharacterized protein LOC111448524 isoform X1

4.2e-80

82.56

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRA Q+E+QPK+EEEVK DENFFPSSTIIRKCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEE+ASLGQ EIPGSSSGNHSGN
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSS-------REDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SS       R++GSS+NEA CSNIDEKN EAN DLKRKQSEVVS+GRHPTK P+SGRDNQQ SF++GKG  KKPKGEKLDW VLRPSK+PNKSG
Subjt:  HSS-------REDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

A0A6J1FUG1 uncharacterized protein LOC111448524 isoform X2

3.4e-82

85.64

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKRE+SNTLRNLKFMQRA Q+E+QPK+EEEVK DENFFPSSTIIRKCVVLVEGDPHPGA KGRMSFQSFNPSID+LNEE+ASLGQ EIPGSSSGNHSGN
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSR++GSS+NEA CSNIDEKN EAN DLKRKQSEVVS+GRHPTK P+SGRDNQQ SF++GKG  KKPKGEKLDW VLRPSK+PNKSG
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

A0A6J1G7T2 uncharacterized protein LOC111451657

3.4e-82

87.77

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK +EN FPSS IIRKCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E P  SSGNHS N
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSRE+GSSRNEAV SN DEKN E NGDLKRKQSEVVSEGRHPTK PKSGRDNQQ SFNNGKGFFKKPKGE LDW VLRPSK+PNK G
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

A0A6J1L4S0 uncharacterized protein LOC111499887

1.3e-81

87.77

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Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN
        MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVK +EN FPSS IIRKCVVLVEGDPHPGAL+GR+SFQSFNPSIDKLNEEVASLGQ+E   SSSGNHS N
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGN

Query:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG
         SSRE+GSSRNEAV SN DEKN E NGDLKRKQSEVVSEGRHPTK PKSGRDNQQ SFNNGKGFFKKPKGE LDW VLRPSK+PNK G
Subjt:  HSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G59460.1 scarecrow-like transcription factor 11 (SCL11)

2.6e-34

53.72

Show/hide

Query:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPS-STIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSG
        MAKREIS+TLRNLKFMQR++ K E+ K +EE       FPS  T+ +KCVV+ + DP PGAL GRMSFQSFNPSI+KL+EE  + G    P SSS N  G
Subjt:  MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPS-STIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSG

Query:  NHSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRH-PTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNK
          S  E  SS+         E + E +GDLKRKQSEVVSE ++ P K P+S  D   PS   G G FKKPK +K+DW VLRP K   K
Subjt:  NHSSREDGSSRNEAVCSNIDEKNSEANGDLKRKQSEVVSEGRH-PTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNK

Sequences

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CDS sequence

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ATGGCGAAGCGCGAGATCTCCAATACGTTAAGAAACTTGAAGTTCATGCAAAGGGCGGCTCAGAAAGAGGAGCAACCTAAGAAAGAGGAAGAAGTAAAACGTGATGAGAA
TTTCTTTCCGTCGAGTACTATTATCAGAAAGTGTGTGGTTTTAGTTGAAGGAGATCCTCATCCAGGGGCTCTTAAAGGTCGAATGTCATTTCAAAGCTTTAATCCTTCAA
TTGATAAACTCAATGAAGAAGTAGCTAGCTTAGGTCAGCAAGAAATTCCTGGCTCTTCATCTGGGAATCACAGTGGAAACCATTCGTCAAGAGAAGATGGATCTTCACGA
AATGAAGCAGTGTGCTCAAACATTGATGAAAAAAATAGTGAGGCTAATGGGGACCTTAAAAGGAAACAATCTGAAGTAGTGTCTGAAGGACGGCATCCAACTAAGTTGCC
AAAAAGTGGTCGGGACAATCAGCAGCCATCATTTAATAATGGTAAAGGATTCTTCAAGAAACCAAAGGGTGAAAAGCTGGACTGGAAGGTTCTTAGGCCCTCCAAATCTC
CAAATAAGAGTGGATAA

mRNA sequence

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Protein sequence

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MAKREISNTLRNLKFMQRAAQKEEQPKKEEEVKRDENFFPSSTIIRKCVVLVEGDPHPGALKGRMSFQSFNPSIDKLNEEVASLGQQEIPGSSSGNHSGNHSSREDGSSR
NEAVCSNIDEKNSEANGDLKRKQSEVVSEGRHPTKLPKSGRDNQQPSFNNGKGFFKKPKGEKLDWKVLRPSKSPNKSG

Spg000578 (gene) of Sponge gourd (cylindrica) v1 genome