; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000607 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000607
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold8:44615690..44619781
RNA-Seq ExpressionSpg000607
SyntenySpg000607
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046415.1 gag/pol protein [Cucumis melo var. makuwa]3.9e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+  + HE+ +T R IM+SLQEMFGQ S QI+H+A KY+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
KAA0050670.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+    HE+ +TGR IM+SLQEMFGQ S QI+H+A  Y+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
KAA0066490.1 gag/pol protein [Cucumis melo var. makuwa]8.6e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+    HE+ +T R IM+SLQEMFGQ S QI+H+A KY+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
TrEMBL top hitse value%identityAlignment
A0A5A7SMH8 Gag/pol protein5.5e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+    HE+ +T R IM+SLQEMFGQ S QI+H+A KY+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
A0A5A7TYF5 Gag/pol protein1.9e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+  + HE+ +T R IM+SLQEMFGQ S QI+H+A KY+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
A0A5A7U676 Gag/pol protein4.2e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+    HE+ +TGR IM+SLQEMFGQ S QI+H+A  Y+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
A0A5A7VH46 Gag/pol protein4.2e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+    HE+ +T R IM+SLQEMFGQ S QI+H+A KY+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
A0A5D3CPJ6 Gag/pol protein5.5e-0458.54Show/hide
Query:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
        E+    HE+ +T R IM+SLQEMFGQ S QI+H+A KY+YN
Subjt:  EISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCTTAATATTGTACGTGGGATCATATTTGAGTTTGGTGGTAAATCGACGGCGGAGAGAGGTTGTGAGAAGAGCCGTCTTCATGCGAAATCCAGATTCCACGTGGG
CATCTTCTATTGGTTGTCCAGAATGTTGCGGATGGATGACCTGTCACCAAAGTTTTCGGGGTTTTTTGGAAAAGCTTCTACTGCGTTAGAGATTTCAACCCTACATCATG
AGGCTACGATCACTGGACGCGTGATCATGGAGTCGTTGCAAGAAATGTTTGGGCAGATGTCCACTCAGATCCGGCACGAGGCCTTCAAATACGTTTACAATTATAGCTCT
GCTCTCAGAATGGATGCAAGGAAAATGGATAACGATCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGCTTAATATTGTACGTGGGATCATATTTGAGTTTGGTGGTAAATCGACGGCGGAGAGAGGTTGTGAGAAGAGCCGTCTTCATGCGAAATCCAGATTCCACGTGGG
CATCTTCTATTGGTTGTCCAGAATGTTGCGGATGGATGACCTGTCACCAAAGTTTTCGGGGTTTTTTGGAAAAGCTTCTACTGCGTTAGAGATTTCAACCCTACATCATG
AGGCTACGATCACTGGACGCGTGATCATGGAGTCGTTGCAAGAAATGTTTGGGCAGATGTCCACTCAGATCCGGCACGAGGCCTTCAAATACGTTTACAATTATAGCTCT
GCTCTCAGAATGGATGCAAGGAAAATGGATAACGATCAATAG
Protein sequenceShow/hide protein sequence
MWLNIVRGIIFEFGGKSTAERGCEKSRLHAKSRFHVGIFYWLSRMLRMDDLSPKFSGFFGKASTALEISTLHHEATITGRVIMESLQEMFGQMSTQIRHEAFKYVYNYSS
ALRMDARKMDNDQ