; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000611 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000611
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionYABBY2-like transcription factor YAB2
Genome locationscaffold8:46523495..46529491
RNA-Seq ExpressionSpg000611
SyntenySpg000611
Gene Ontology termsGO:0007275 - multicellular organism development (biological process)
GO:0010158 - abaxial cell fate specification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
InterPro domainsIPR006780 - YABBY protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140176.1 putative axial regulator YABBY 2 [Cucumis sativus]4.6e-4489.19Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQV+ GDSS+DR SSS   K +KI  LD SA
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA

Query:  ERDQHRIPPIR
        ERDQHRIPPIR
Subjt:  ERDQHRIPPIR

XP_008449608.1 PREDICTED: putative axial regulator YABBY 2 [Cucumis melo]4.6e-4489.19Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQV+ GDSS+DR SSS   K +KI  LD SA
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA

Query:  ERDQHRIPPIR
        ERDQHRIPPIR
Subjt:  ERDQHRIPPIR

XP_022153076.1 putative axial regulator YABBY 2 [Momordica charantia]1.3e-4392.73Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQD-SQQGHKQQQV-STGDSSRDRG-SSSKCSKISPLDSAE
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQD SQQGHKQQQV STGDSS++RG SSSKCSKI   DSAE
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQD-SQQGHKQQQV-STGDSSRDRG-SSSKCSKISPLDSAE

Query:  RDQHRIPPIR
        RDQHRIPPIR
Subjt:  RDQHRIPPIR

XP_022986992.1 putative axial regulator YABBY 2 isoform X3 [Cucurbita maxima]5.1e-4381.03Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRG-------SSSKCSKISPL
        MSL+MMA+ERVCYVHCNFCNTILAVSVPCN+MFTLVTVRCGHCSNLLSVNMGAS+QV+PPQDSQ G+KQQQVS GD S+DRG       SSSKC+KI+ L
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRG-------SSSKCSKISPL

Query:  DSAERDQHRIPPIRRE
        DSAERDQHRIPPIR++
Subjt:  DSAERDQHRIPPIRRE

XP_038902333.1 putative axial regulator YABBY 2 isoform X3 [Benincasa hispida]1.3e-4690.91Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDR---GSSSKCSKISPLDSAE
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQV+ GDSS+DR    SSSKC+KI  LDSAE
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDR---GSSSKCSKISPLDSAE

Query:  RDQHRIPPIR
        RDQHRIPPIR
Subjt:  RDQHRIPPIR

TrEMBL top hitse value%identityAlignment
A0A0A0KGY1 Uncharacterized protein2.2e-4489.19Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQV+ GDSS+DR SSS   K +KI  LD SA
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA

Query:  ERDQHRIPPIR
        ERDQHRIPPIR
Subjt:  ERDQHRIPPIR

A0A1S4DXR9 putative axial regulator YABBY 22.2e-4489.19Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQV+ GDSS+DR SSS   K +KI  LD SA
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSS---KCSKISPLD-SA

Query:  ERDQHRIPPIR
        ERDQHRIPPIR
Subjt:  ERDQHRIPPIR

A0A6J1DJL5 putative axial regulator YABBY 26.5e-4492.73Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQD-SQQGHKQQQV-STGDSSRDRG-SSSKCSKISPLDSAE
        MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQD SQQGHKQQQV STGDSS++RG SSSKCSKI   DSAE
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQD-SQQGHKQQQV-STGDSSRDRG-SSSKCSKISPLDSAE

Query:  RDQHRIPPIR
        RDQHRIPPIR
Subjt:  RDQHRIPPIR

A0A6J1J940 putative axial regulator YABBY 2 isoform X32.5e-4381.03Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRG-------SSSKCSKISPL
        MSL+MMA+ERVCYVHCNFCNTILAVSVPCN+MFTLVTVRCGHCSNLLSVNMGAS+QV+PPQDSQ G+KQQQVS GD S+DRG       SSSKC+KI+ L
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRG-------SSSKCSKISPL

Query:  DSAERDQHRIPPIRRE
        DSAERDQHRIPPIR++
Subjt:  DSAERDQHRIPPIRRE

A0A6J1JFK2 putative axial regulator YABBY 2 isoform X23.2e-4382.46Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRG-------SSSKCSKISPL
        MSL+MMA+ERVCYVHCNFCNTILAVSVPCN+MFTLVTVRCGHCSNLLSVNMGAS+QV+PPQDSQ G+KQQQVS GD S+DRG       SSSKC+KI+ L
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRG-------SSSKCSKISPL

Query:  DSAERDQHRIPPIR
        DSAERDQHRIPPIR
Subjt:  DSAERDQHRIPPIR

SwissProt top hitse value%identityAlignment
Q01JG2 Protein YABBY 53.0e-1476.74Show/hide
Query:  ERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNM
        E++CYVHCNFC+TILAV VPC+S+F  VTVRCGHC+NLLSVN+
Subjt:  ERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNM

Q10FZ7 Protein YABBY 23.4e-1846.73Show/hide
Query:  ASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGH-KQQQVSTGDSSRDRGSSSKCSKISPLDSAERDQHRI--
        A E VCYVHCNFCNTI AVSVP NSM  +VTVRCGHC++LLSVN+   +Q +P +D  Q + K   +S  ++  + GSSS+  ++  + S    +H +  
Subjt:  ASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGH-KQQQVSTGDSSRDRGSSSKCSKISPLDSAERDQHRI--

Query:  -PPIRRE
         PP +R+
Subjt:  -PPIRRE

Q2QM17 Protein YABBY 67.2e-1640.77Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDR----------GSSSKCSKI
        MS  +  +E+VCYVHCNFCNTILAVSVP NSM  +VTVRCGHC+NLLSVN+   +   P       H  Q+       RD+           SSS   ++
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDR----------GSSSKCSKI

Query:  SPLDSA-----------ERDQHRIPPIRRE
         P  +A           E+  H  PP +R+
Subjt:  SPLDSA-----------ERDQHRIPPIRRE

Q8GW46 Axial regulator YABBY 52.7e-1543.86Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKC-----SKISPLDS
        M+  +MA+E++CY+ CNFCN ILAV+VPC+S+F +VTVRCGHC+NL SVNM A+LQ +   + Q        +T  +  + GSSS+      S+IS    
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKC-----SKISPLDS

Query:  AERDQHRIPPIRRE
         E+     PP +R+
Subjt:  AERDQHRIPPIRRE

Q9XFB0 Putative axial regulator YABBY 29.1e-1952.78Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASL-QVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKCSKISPLDSAERD
        MS+D  +SERVCYVHC+FC TILAVSVP  S+FTLVTVRCGHC+NLLS+N+G SL Q   P   Q     +Q +T   +R   +SS  S  +  ++ +R+
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASL-QVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKCSKISPLDSAERD

Query:  QHRIPPIR
          R+PPIR
Subjt:  QHRIPPIR

Arabidopsis top hitse value%identityAlignment
AT1G08465.1 Plant-specific transcription factor YABBY family protein6.4e-2052.78Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASL-QVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKCSKISPLDSAERD
        MS+D  +SERVCYVHC+FC TILAVSVP  S+FTLVTVRCGHC+NLLS+N+G SL Q   P   Q     +Q +T   +R   +SS  S  +  ++ +R+
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASL-QVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKCSKISPLDSAERD

Query:  QHRIPPIR
          R+PPIR
Subjt:  QHRIPPIR

AT2G26580.1 plant-specific transcription factor YABBY family protein1.9e-1643.86Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKC-----SKISPLDS
        M+  +MA+E++CY+ CNFCN ILAV+VPC+S+F +VTVRCGHC+NL SVNM A+LQ +   + Q        +T  +  + GSSS+      S+IS    
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKC-----SKISPLDS

Query:  AERDQHRIPPIRRE
         E+     PP +R+
Subjt:  AERDQHRIPPIRRE

AT2G26580.2 plant-specific transcription factor YABBY family protein1.9e-1643.86Show/hide
Query:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKC-----SKISPLDS
        M+  +MA+E++CY+ CNFCN ILAV+VPC+S+F +VTVRCGHC+NL SVNM A+LQ +   + Q        +T  +  + GSSS+      S+IS    
Subjt:  MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKC-----SKISPLDS

Query:  AERDQHRIPPIRRE
         E+     PP +R+
Subjt:  AERDQHRIPPIRRE

AT2G45190.1 Plant-specific transcription factor YABBY family protein3.8e-1270.45Show/hide
Query:  SERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNM
        S+ +CYV CNFC TILAV+VP  S+F  VTVRCG C+NLLSVNM
Subjt:  SERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNM

AT4G00180.1 Plant-specific transcription factor YABBY family protein2.0e-1355.74Show/hide
Query:  ASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGH
        +++++CYVHC+FC+T+LAVSVP +S+F  VTVRCGHCSNLLSV +     ++ P  S  GH
Subjt:  ASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACACTCGTGAC
TGTGAGATGTGGGCATTGTTCAAATTTGCTGTCTGTAAACATGGGAGCTTCTCTCCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGTCACAAACAGCAGCAAGTGAGCA
CTGGAGATTCGAGCAGGGACAGAGGTTCTTCTTCTAAATGCAGTAAAATTAGCCCTCTTGATTCTGCTGAACGTGACCAACACAGAATCCCTCCCATTCGCCGTGAGTTT
CCCTCTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACACTCGTGAC
TGTGAGATGTGGGCATTGTTCAAATTTGCTGTCTGTAAACATGGGAGCTTCTCTCCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGTCACAAACAGCAGCAAGTGAGCA
CTGGAGATTCGAGCAGGGACAGAGGTTCTTCTTCTAAATGCAGTAAAATTAGCCCTCTTGATTCTGCTGAACGTGACCAACACAGAATCCCTCCCATTCGCCGTGAGTTT
CCCTCTCTCTGA
Protein sequenceShow/hide protein sequence
MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKCSKISPLDSAERDQHRIPPIRREF
PSL