; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000620 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000620
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionWD repeat-containing protein 13
Genome locationscaffold8:37897787..37913974
RNA-Seq ExpressionSpg000620
SyntenySpg000620
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001680 - WD40 repeat
IPR015943 - WD40/YVTN repeat-like-containing domain superfamily
IPR019775 - WD40 repeat, conserved site
IPR036322 - WD40-repeat-containing domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045617.1 WD repeat-containing protein 13 isoform X2 [Cucumis melo var. makuwa]6.9e-9160.66Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTEDGSS  EG EVEKE+LKKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W           GK 
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RV-YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVF---FDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSH
         V +R F       E   L  ++S      R      P  L     S + N  +L+F   +D++++                           + DLQSH
Subjt:  RV-YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVF---FDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSH

Query:  RRSSFSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSS
        RRSSFSS+ASDNS LQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSS
Subjt:  RRSSFSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSS

Query:  MDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI
        MDKTVRVWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  MDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI

XP_008460990.1 PREDICTED: WD repeat-containing protein 13 isoform X1 [Cucumis melo]3.4e-9062.08Show/hide
Query:  EQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV
        EQRTEDGSS  EG EVEKE+LKKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W         G G    
Subjt:  EQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV

Query:  YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFS
            + P                 R W +  L  P+L S+  +SGR            W +  +     +  VE SW         SS DLQSHRRSSFS
Subjt:  YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFS

Query:  SNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR
        S+ASDNS LQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR
Subjt:  SNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR

Query:  VWEISKGLCIRVIYGVSSQLCIRFHPI
        VWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VWEISKGLCIRVIYGVSSQLCIRFHPI

XP_008460991.1 PREDICTED: WD repeat-containing protein 13 isoform X2 [Cucumis melo]2.4e-9162.31Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTEDGSS  EG EVEKE+LKKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W         G G  
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS
              + P                 R W +  L  P+L S+  +SGR            W +  +     +  VE SW         SS DLQSHRRSS
Subjt:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS

Query:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
        FSS+ASDNS LQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
Subjt:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT

Query:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI
        VRVWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI

XP_011649251.1 WD repeat-containing protein 13 isoform X2 [Cucumis sativus]1.2e-9062.01Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTEDGSS  EG EVEKE+ KKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W         G G  
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS
              + P                 R W +  L  P+L S+  +SGR            W +  +     +  VE SW         SS DLQSHRRSS
Subjt:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS

Query:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
        FSS+ASDNSQLQTR+VE AYSFVGMHCIFDQ KAAV V+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
Subjt:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT

Query:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI
        VRVWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI

XP_038901343.1 WD repeat-containing protein 13 [Benincasa hispida]2.6e-9062.31Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTEDGSS  EG EV+KE+LKKNVDPEL SC LQP++IGVDPDYIGIRRLLLYRKAEA V RRK                  W         G G  
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS
              + P                 R W +  L  P+L S+  +SGR            W +        +  VE SW         SS DLQSHRRSS
Subjt:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS

Query:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
        FSS+ASDNSQLQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYG ADG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
Subjt:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT

Query:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI
        VRVWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI

TrEMBL top hitse value%identityAlignment
A0A0A0LIV0 Uncharacterized protein1.1e-8961.77Show/hide
Query:  EQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV
        EQRTEDGSS  EG EVEKE+ KKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W         G G    
Subjt:  EQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV

Query:  YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFS
            + P                 R W +  L  P+L S+  +SGR            W +  +     +  VE SW         SS DLQSHRRSSFS
Subjt:  YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFS

Query:  SNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR
        S+ASDNSQLQTR+VE AYSFVGMHCIFDQ KAAV V+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR
Subjt:  SNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR

Query:  VWEISKGLCIRVIYGVSSQLCIRFHPI
        VWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VWEISKGLCIRVIYGVSSQLCIRFHPI

A0A1S3CDQ8 WD repeat-containing protein 13 isoform X21.1e-9162.31Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTEDGSS  EG EVEKE+LKKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W         G G  
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS
              + P                 R W +  L  P+L S+  +SGR            W +  +     +  VE SW         SS DLQSHRRSS
Subjt:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS

Query:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
        FSS+ASDNS LQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
Subjt:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT

Query:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI
        VRVWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI

A0A1S3CEX7 WD repeat-containing protein 13 isoform X11.7e-9062.08Show/hide
Query:  EQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV
        EQRTEDGSS  EG EVEKE+LKKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W         G G    
Subjt:  EQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV

Query:  YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFS
            + P                 R W +  L  P+L S+  +SGR            W +  +     +  VE SW         SS DLQSHRRSSFS
Subjt:  YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFS

Query:  SNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR
        S+ASDNS LQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR
Subjt:  SNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVR

Query:  VWEISKGLCIRVIYGVSSQLCIRFHPI
        VWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  VWEISKGLCIRVIYGVSSQLCIRFHPI

A0A5A7TUV5 WD repeat-containing protein 13 isoform X23.3e-9160.66Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTEDGSS  EG EVEKE+LKKNVDPELLSC LQP++IGVDPDYIGIRRLLLYRKAEA + RRK                  W           GK 
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RV-YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVF---FDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSH
         V +R F       E   L  ++S      R      P  L     S + N  +L+F   +D++++                           + DLQSH
Subjt:  RV-YRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVF---FDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSH

Query:  RRSSFSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSS
        RRSSFSS+ASDNS LQTR+VE AYSFVGMHCIFDQ KAAVTV+KFGHMSSDLLAYGA+DG LTVCNVSEPSS+VKQLLGHSKDVTDFDFSSNNQYIASSS
Subjt:  RRSSFSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSS

Query:  MDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI
        MDKTVRVWEISKGLCIRVIYGVSSQLCIRFHP+
Subjt:  MDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI

A0A6J1JGR4 WD repeat-containing protein 131.7e-8759.27Show/hide
Query:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA
        MAEQRTED SST EGGEVEKE+ KKN+D ELLSC LQP +IGVDPDYIG+RRLLL+RKAEA V RRK                        +   G G  
Subjt:  MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKA

Query:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS
              + P                 R W +  +  P+L S+  +SGR     ++    I  L    +W +IK                  DLQS RRSS
Subjt:  RVYRVFKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSS

Query:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT
        FSSNASDNSQL TR+ E AYSFVGMHCIFDQ K AVTVLKFGHMSSDLLAYGAADG+LTVCNVSEPSSTVK LLGHSKD+TDFDFSSNNQYIASSSMDKT
Subjt:  FSSNASDNSQLQTRKVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKT

Query:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI
        VRVWEIS+G+CIRVIYGVSSQLCIRFHP+
Subjt:  VRVWEISKGLCIRVIYGVSSQLCIRFHPI

SwissProt top hitse value%identityAlignment
Q06078 U3 small nucleolar RNA-associated protein 217.6e-0835.79Show/hide
Query:  AAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHP
        A +T + + H SSDL A    D ++ V + +     V+QL GHS  +T FDFS   ++I S+S+D T+R W++  G CI  I   +    ++F P
Subjt:  AAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHP

Q5RF24 WD repeat-containing protein 132.5e-1135.09Show/hide
Query:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG
        Y+F GM+ +FDQ    AV  ++F +     LA  + DG++++C  V  P + ++ L GH++ V+DF +S +N  + S+S+D T+R+W    G CIR I  
Subjt:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG

Query:  V--SSQLCIRFHPI
           +  LC  F P+
Subjt:  V--SSQLCIRFHPI

Q6DKP5 WD repeat-containing protein 138.7e-1235.96Show/hide
Query:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG
        Y+F GM+ +FDQ    AV  ++F +     LA  + DG++++C  V  P + ++ L GH++ V+DF +S +N  + S+S+D T+R+W    G CIR I  
Subjt:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG

Query:  VSSQ--LCIRFHPI
          S   LC  F P+
Subjt:  VSSQ--LCIRFHPI

Q91V09 WD repeat-containing protein 135.6e-1135.09Show/hide
Query:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG
        Y+F GM+ +FDQ    AV  ++F +     LA  + DG++++C  V  P + +  L GH++ V+DF +S +N  + S+S+D T+R+W    G CIR I  
Subjt:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG

Query:  V--SSQLCIRFHPI
           +  LC  F P+
Subjt:  V--SSQLCIRFHPI

Q9H1Z4 WD repeat-containing protein 138.7e-1235.96Show/hide
Query:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG
        Y+F GM+ +FDQ    AV  ++F +     LA  + DG++++C  V  P + ++ L GH++ V+DF +S +N  + S+S+D T+R+W    G CIR I  
Subjt:  YSFVGMHCIFDQS-KAAVTVLKFGHMSSDLLAYGAADGALTVCN-VSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG

Query:  VSSQ--LCIRFHPI
          S   LC  F P+
Subjt:  VSSQ--LCIRFHPI

Arabidopsis top hitse value%identityAlignment
AT2G16405.1 Transducin/WD40 repeat-like superfamily protein9.4e-6247.26Show/hide
Query:  EDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV-YRV
        ++GSS  E GE + E  K++ D E LSC +QP T   DP YIGIRR+LL+RKA++GV  R                +  W           GK  V YR 
Subjt:  EDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARV-YRV

Query:  FKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLF---QCLSSCDLQSHRRSSFS
        F +                  R+W    L  P+LLSS  +SGR                    W           E   F   + L S +  S RR+SFS
Subjt:  FKAPLETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLF---QCLSSCDLQSHRRSSFS

Query:  SNASDNSQLQTR-KVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTV
        S+ SD      R  VE AYSFVGMHCIFDQ K++VTVLKFGHMSSD+LAYGA+DG+LTVC++ E  S +KQL GHSKDVTDFDFSSNNQYIASSS+DKT+
Subjt:  SNASDNSQLQTR-KVELAYSFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTV

Query:  RVWEISKGLCIRVIYGVSSQLCIRFHPI
        RVWE+S+G+CIRVIYG+S Q CIRFHP+
Subjt:  RVWEISKGLCIRVIYGVSSQLCIRFHPI

AT3G15470.1 Transducin/WD40 repeat-like superfamily protein8.6e-0732.38Show/hide
Query:  GHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI-------------IRVWPKLRNRLIDRWNPITSKFLWWISREARN
        GH  DV D  + S +Q++ SSSMDKTVR+W +S   C++V        CI+F+P+             +RVW     +++D          W+   E   
Subjt:  GHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI-------------IRVWPKLRNRLIDRWNPITSKFLWWISREARN

Query:  SAGYT
        SA YT
Subjt:  SAGYT

AT3G21540.1 transducin family protein / WD-40 repeat family protein3.9e-0732.98Show/hide
Query:  FDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQL
        F+  K AVT L++  + S +LA G+ D  + + +V   S   + L GH   VTD  F    + + SSS DK +RVW++    C++++ G  S++
Subjt:  FDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQL

AT3G49660.1 Transducin/WD40 repeat-like superfamily protein7.8e-0833.66Show/hide
Query:  AVTVLKFGHMSSD--LLAYGAADGAL---TVCNVSEP-SSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG-VSSQLCIRFH
        AV+ +KF   SSD  LLA  +AD  +   T+  +++P +  V++  GH   ++D  FSS+ ++I S+S DKT+++W++  G  I+ + G  +   C+ F+
Subjt:  AVTVLKFGHMSSD--LLAYGAADGAL---TVCNVSEP-SSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYG-VSSQLCIRFH

Query:  P
        P
Subjt:  P

AT5G54200.1 Transducin/WD40 repeat-like superfamily protein1.0e-0732.97Show/hide
Query:  VKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI-------------IRVWPKLRNRLIDRWNPI
        V   +GH  DV D  + S +Q++ SSSMDKTVR+W++S   C++V        CI+F+P+             +R+W    ++++D WN +
Subjt:  VKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPI-------------IRVWPKLRNRLIDRWNPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGCAAAGGACCGAGGATGGTAGCTCAACGAACGAAGGAGGAGAGGTGGAGAAGGAGCAACTGAAGAAAAATGTGGATCCGGAACTTCTCAGCTGCTTCCTCCA
ACCTGTGACTATTGGTGTTGATCCGGACTATATTGGCATTCGTCGTCTCTTGCTCTATCGGAAGGCCGAAGCCGGGGTTCATCGTCGTAAAGCTTCTTCTATTGGTGTTT
GCCAAAGGACTGGAAGTGCAATGGAAAAGGTTACGTGGCATTCCGCAATTTCATTCGCCGGCCAAGGAATTGGGAAAGCTCGCGTGTACCGAGTCTTCAAAGCACCCCTG
GAAACAGTGGAAGATGGGTTCCTCCTCCAAGTCCGCTCTCTCTCTTGCAGGAGGTGGAGAGCTGGAGTTCTAGCAGGCCCAACTCTTCTGTCCTCTTTGCCAAGCTCTGG
AAGGCTAAATTTCCTGGTGTTGGTGTTCTTTGATATTATTTGGAATCTTGGGTTTGAGAGGAATTGGAGAACTATTAAGGGTGTAGAGGGGTCTTGGGAGGAACACGGTT
TATTTCAGTGCCTGTCTTCATGCGACCTACAGAGTCACCGAAGATCAAGTTTTAGCTCAAATGCAAGTGATAATAGTCAGCTACAAACTCGTAAAGTTGAACTTGCTTAT
TCTTTTGTAGGAATGCATTGTATATTTGATCAATCCAAAGCTGCTGTTACGGTTCTGAAGTTTGGGCACATGAGCTCTGATCTATTAGCATATGGAGCAGCGGATGGGGC
CTTGACTGTATGCAATGTCTCTGAACCATCTTCAACCGTCAAGCAATTGCTGGGCCATTCAAAAGACGTCACAGACTTTGATTTTTCATCAAATAATCAGTACATTGCAT
CATCATCCATGGATAAAACCGTTAGAGTATGGGAGATATCAAAAGGACTTTGCATTAGAGTAATCTATGGAGTCTCTTCACAATTGTGCATACGTTTTCATCCGATCATC
AGAGTTTGGCCAAAATTGAGGAATCGGCTGATTGACCGATGGAATCCAATAACTTCAAAATTCCTGTGGTGGATTTCTAGAGAGGCAAGAAACAGTGCTGGATATACTCT
AGTCCTGTCAAGGGCCGAGAAAGAGAAGTGCCATGATGCGACCAAGGAGGACGGTGCATCATTTGACACACCAAGAAGAGCTATTTCTTCTGGTTTTCCCTCATTTTCTC
AGTTTGTTAGATGCTTTGTTGGGGAAGGTTCAGAAGTTTACTTCTGGGAGGATCATTGGTCTATCATTCTTGGGAGGAGAGATGTTAGGGTGTGGACTCCCGATCCTTCC
AGGGGTTTCTCTTGCCATTCCTACGAGCATTCTTTGTCTCGTTTCCCAACCTCAGTAGCTACTCTTGAGGCTTCTGTTTATGCCTCTCTCTGGAAGGTTAAAATTCTTAA
GAAGGAGGATAATTTGAATCATTTGTTGTGGGAATGTCAATTTGCTACTTACCTTTGGAGTTGCTGGAGGGGAATGTTCGGTGTTAGTGGGGTGTGTAATAGAGATGGGC
AGTTGTTGATGGAGGAAGTGCTATTGCATCCTCCTTTTAGGGAGAAAGTGTCTTGGGCATCTCCCTTTGGGAATGAGATTCCAAGGACAGTGTCAAGTGGCACAGATGTG
CTGACATTGCATCCCTTCCCATGGTTCGGAGGTTGCGTCATAGGGTCGGGTTTTGGGTGGCATCATGAAGCATCATTGGAACTCAATAGATCTCGGTTGGCATGGTATTT
GTCCGTCATGTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGCAAAGGACCGAGGATGGTAGCTCAACGAACGAAGGAGGAGAGGTGGAGAAGGAGCAACTGAAGAAAAATGTGGATCCGGAACTTCTCAGCTGCTTCCTCCA
ACCTGTGACTATTGGTGTTGATCCGGACTATATTGGCATTCGTCGTCTCTTGCTCTATCGGAAGGCCGAAGCCGGGGTTCATCGTCGTAAAGCTTCTTCTATTGGTGTTT
GCCAAAGGACTGGAAGTGCAATGGAAAAGGTTACGTGGCATTCCGCAATTTCATTCGCCGGCCAAGGAATTGGGAAAGCTCGCGTGTACCGAGTCTTCAAAGCACCCCTG
GAAACAGTGGAAGATGGGTTCCTCCTCCAAGTCCGCTCTCTCTCTTGCAGGAGGTGGAGAGCTGGAGTTCTAGCAGGCCCAACTCTTCTGTCCTCTTTGCCAAGCTCTGG
AAGGCTAAATTTCCTGGTGTTGGTGTTCTTTGATATTATTTGGAATCTTGGGTTTGAGAGGAATTGGAGAACTATTAAGGGTGTAGAGGGGTCTTGGGAGGAACACGGTT
TATTTCAGTGCCTGTCTTCATGCGACCTACAGAGTCACCGAAGATCAAGTTTTAGCTCAAATGCAAGTGATAATAGTCAGCTACAAACTCGTAAAGTTGAACTTGCTTAT
TCTTTTGTAGGAATGCATTGTATATTTGATCAATCCAAAGCTGCTGTTACGGTTCTGAAGTTTGGGCACATGAGCTCTGATCTATTAGCATATGGAGCAGCGGATGGGGC
CTTGACTGTATGCAATGTCTCTGAACCATCTTCAACCGTCAAGCAATTGCTGGGCCATTCAAAAGACGTCACAGACTTTGATTTTTCATCAAATAATCAGTACATTGCAT
CATCATCCATGGATAAAACCGTTAGAGTATGGGAGATATCAAAAGGACTTTGCATTAGAGTAATCTATGGAGTCTCTTCACAATTGTGCATACGTTTTCATCCGATCATC
AGAGTTTGGCCAAAATTGAGGAATCGGCTGATTGACCGATGGAATCCAATAACTTCAAAATTCCTGTGGTGGATTTCTAGAGAGGCAAGAAACAGTGCTGGATATACTCT
AGTCCTGTCAAGGGCCGAGAAAGAGAAGTGCCATGATGCGACCAAGGAGGACGGTGCATCATTTGACACACCAAGAAGAGCTATTTCTTCTGGTTTTCCCTCATTTTCTC
AGTTTGTTAGATGCTTTGTTGGGGAAGGTTCAGAAGTTTACTTCTGGGAGGATCATTGGTCTATCATTCTTGGGAGGAGAGATGTTAGGGTGTGGACTCCCGATCCTTCC
AGGGGTTTCTCTTGCCATTCCTACGAGCATTCTTTGTCTCGTTTCCCAACCTCAGTAGCTACTCTTGAGGCTTCTGTTTATGCCTCTCTCTGGAAGGTTAAAATTCTTAA
GAAGGAGGATAATTTGAATCATTTGTTGTGGGAATGTCAATTTGCTACTTACCTTTGGAGTTGCTGGAGGGGAATGTTCGGTGTTAGTGGGGTGTGTAATAGAGATGGGC
AGTTGTTGATGGAGGAAGTGCTATTGCATCCTCCTTTTAGGGAGAAAGTGTCTTGGGCATCTCCCTTTGGGAATGAGATTCCAAGGACAGTGTCAAGTGGCACAGATGTG
CTGACATTGCATCCCTTCCCATGGTTCGGAGGTTGCGTCATAGGGTCGGGTTTTGGGTGGCATCATGAAGCATCATTGGAACTCAATAGATCTCGGTTGGCATGGTATTT
GTCCGTCATGTCCTAG
Protein sequenceShow/hide protein sequence
MAEQRTEDGSSTNEGGEVEKEQLKKNVDPELLSCFLQPVTIGVDPDYIGIRRLLLYRKAEAGVHRRKASSIGVCQRTGSAMEKVTWHSAISFAGQGIGKARVYRVFKAPL
ETVEDGFLLQVRSLSCRRWRAGVLAGPTLLSSLPSSGRLNFLVLVFFDIIWNLGFERNWRTIKGVEGSWEEHGLFQCLSSCDLQSHRRSSFSSNASDNSQLQTRKVELAY
SFVGMHCIFDQSKAAVTVLKFGHMSSDLLAYGAADGALTVCNVSEPSSTVKQLLGHSKDVTDFDFSSNNQYIASSSMDKTVRVWEISKGLCIRVIYGVSSQLCIRFHPII
RVWPKLRNRLIDRWNPITSKFLWWISREARNSAGYTLVLSRAEKEKCHDATKEDGASFDTPRRAISSGFPSFSQFVRCFVGEGSEVYFWEDHWSIILGRRDVRVWTPDPS
RGFSCHSYEHSLSRFPTSVATLEASVYASLWKVKILKKEDNLNHLLWECQFATYLWSCWRGMFGVSGVCNRDGQLLMEEVLLHPPFREKVSWASPFGNEIPRTVSSGTDV
LTLHPFPWFGGCVIGSGFGWHHEASLELNRSRLAWYLSVMS