; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000671 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000671
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear cap-binding protein subunit 2
Genome locationscaffold8:40548110..40554479
RNA-Seq ExpressionSpg000671
SyntenySpg000671
Gene Ontology termsGO:0045292 - mRNA cis splicing, via spliceosome (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005846 - nuclear cap binding complex (cellular component)
GO:0000339 - RNA cap binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR027157 - Nuclear cap-binding protein subunit 2
IPR034148 - NCBP2, RNA recognition motif
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570919.1 Nuclear cap-binding protein subunit 2, partial [Cucurbita argyrosperma subsp. sororia]2.4e-11581.75Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
         DFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHG+G RHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_004137136.1 nuclear cap-binding protein subunit 2 [Cucumis sativus]3.7e-11681.75Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DP+KLS+YRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
        VDFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_008464581.1 PREDICTED: nuclear cap-binding protein subunit 2 [Cucumis melo]3.7e-11682.12Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DP+KLSVYRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
        VDFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_022986365.1 nuclear cap-binding protein subunit 2-like isoform X1 [Cucurbita maxima]4.9e-11681.75Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
         DFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHG+GHRHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

XP_038900343.1 nuclear cap-binding protein subunit 2 [Benincasa hispida]6.3e-11682.78Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DP+KLSVYRDRRF GTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
        VDFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDH+SRPEKNPRFRESGDSDEEDDDD+KQR
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

TrEMBL top hitse value%identityAlignment
A0A0A0KVX7 Nuclear cap-binding protein subunit 23.1e-11682.12Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DP+KLS+YRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
        VDFDWGFQDGRQWGRGRSGGQV    Y T     +                       FS +  GYGKLVQKELEAQRQLVDYGTGSLGSM PVMPQYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHGHG+RHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A1S3CLT9 Nuclear cap-binding protein subunit 21.8e-11682.12Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DP+KLSVYRDRRF G+QDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
        VDFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM PVM QYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRN ++ESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1FX36 Nuclear cap-binding protein subunit 23.4e-11581.39Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
         DFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGS+  V+PQYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHG+G RHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1G5C4 Nuclear cap-binding protein subunit 23.4e-11581.39Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DPSKLSVYRDRRFQGTQDEFEHAL +STTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
        VDFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGT SLGSM PVM Q+G 
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHGHG+RHGRDYHHRKR+RDDDRHAHESSKRTSD+ESRRN +HESRPEKNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

A0A6J1J7C7 Nuclear cap-binding protein subunit 22.4e-11681.75Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DPSKLSVYRDRRFQGTQDEFE ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCF LYYSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK
         DFDWGFQDGRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLGSM  V+PQYGK
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGK

Query:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH
        HGGSHG+GHRHGRDYH+RKRYRDDDRHAHESSKRTSDY+SRRNPDHESRP+KNPRFRESGDSDEEDDDDRKQRH
Subjt:  HGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQRH

SwissProt top hitse value%identityAlignment
B7P877 Nuclear cap-binding protein subunit 27.4e-4366.1Show/hide
Query:  LSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD
        LS YRD+ F+G++ E E  L+ STT+YVGNMSFYTTEEQ+YELFS+ G++KK+IMGLD+  KTPCGFCFV YY+RED E+A+++++GT LDDR IR D+D
Subjt:  LSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFD

Query:  WGFQDGRQWGRGRSGGQV
         GF +GRQ+GRG+SGGQV
Subjt:  WGFQDGRQWGRGRSGGQV

P52298 Nuclear cap-binding protein subunit 24.8e-4267.23Show/hide
Query:  KLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQV
        D GF++GRQ+GRGRSGGQV
Subjt:  DWGFQDGRQWGRGRSGGQV

Q3ZBJ1 Nuclear cap-binding protein subunit 24.8e-4267.23Show/hide
Query:  KLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF
        +LS YRD+ F+G  +E E  L+ S T+YVGN+SFYTTEEQ+YELFS++G+IKKIIMGLDK  KT CGFCFV YYSR D E+A+++I+GT LDDR IR D+
Subjt:  KLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDF

Query:  DWGFQDGRQWGRGRSGGQV
        D GF++GRQ+GRGRSGGQV
Subjt:  DWGFQDGRQWGRGRSGGQV

Q84L14 Nuclear cap-binding protein subunit 23.5e-7761.96Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        DP+KLS YRDRRF GTQ+E+E ALQ S TVYVGNMSFYTTEEQ YELFSRAGEI+KIIMGLDKNSKTPCGFCF+LYYSRED EDAVK+ISGT+LDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYG
        VDFDWGF++GRQWGRGRSGGQV    Y T                             + P   GYGK+VQKELEAQR+LVDYG    G+ QP   PQY 
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQP-VMPQYG

Query:  KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
        +     G+G  +R+ RDY  RKRYR+D+R    SS+R  D E +R+       EKNPRFRE GDSDEEDDD  K+R
Subjt:  KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Q9XFD1 Nuclear cap-binding protein subunit 21.1e-8964.87Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        + +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG
        VDFDWGFQ+GRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLG+     P  YG
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG

Query:  ---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
           + GG++G G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  ---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

Arabidopsis top hitse value%identityAlignment
AT1G66260.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-0830.39Show/hide
Query:  RDRRFQGTQDEFEHAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E  L        +  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEHAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT1G66260.2 RNA-binding (RRM/RBD/RNP motifs) family protein2.1e-0830.39Show/hide
Query:  RDRRFQGTQDEFEHAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        R   +Q   D +E  L        +  TTVY+ N+    T E + EL++  GE+K+  +  DKN + P G   V+Y  R D   A++  +  +LD RP++
Subjt:  RDRRFQGTQDEFEHAL--------QTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VD
        ++
Subjt:  VD

AT3G46020.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.6e-0835Show/hide
Query:  ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD
        A + S  ++V  +S YTT++ + +LFS  G+IK+  +  D  ++ P GF F+ + S +D   A+K + G I+D R I V+
Subjt:  ALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVD

AT5G44200.1 CAP-binding protein 207.5e-9164.87Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        + +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG
        VDFDWGFQ+GRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLG+     P  YG
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG

Query:  ---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
           + GG++G G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  ---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR

AT5G44200.2 CAP-binding protein 207.5e-9164.87Show/hide
Query:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR
        + +KLS YRDRRF GTQ+EF+ AL+ STTVY+GN+SFYTTEEQ+YELFSRAGEIKKIIMGLDKN+KTPCGFCFVL+YSREDTEDAVK+ISGTILDDRPIR
Subjt:  DPSKLSVYRDRRFQGTQDEFEHALQTSTTVYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIR

Query:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG
        VDFDWGFQ+GRQWGRGRSGGQV    Y T                             + P   GYGKLVQKELEAQRQLVDYGTGSLG+     P  YG
Subjt:  VDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHFLFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMP-QYG

Query:  ---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR
           + GG++G G  +RHGR  +HRKR RDDDR+  ++S+R +D+ESRR+ D + RPEKNPRFRESGDSD++ +DDRK+R
Subjt:  ---KHGGSHGHG--HRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESRPEKNPRFRESGDSDEEDDDDRKQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAGAGGACAGCGTCAAGACGCTCTGCAGTCGCTTGCACAACCAGTTTTCCTGGGGGCGCAGAGCGTTTCGTCGCTCTACGGTTTTTCTTTTATAATTAGGGCAGC
AACAAGTGGGTTTTCGGGTTGTAGTGCAGATTTTGTTATTCTAGGGTTCATGGCTTCGTTGTTCAAGGTAAATTGCTTGATTTTTGTGGCCATTGTGGCAAAGGGTATTC
TGAGTATTGTTATTACAATAGGAGACCCATCAAAGCTATCTGTATATCGGGATAGAAGATTTCAAGGAACACAAGATGAATTTGAACACGCACTTCAGACTTCAACTACC
GTTTATGTGGGAAATATGTCCTTTTACACGACGGAAGAGCAAGTTTATGAGCTATTTTCTCGAGCGGGAGAAATTAAGAAGATAATCATGGGCTTGGATAAGAATTCAAA
AACACCTTGTGGTTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTAAAATTTATAAGTGGAACGATTCTTGATGATCGTCCTATTCGTGTGGATT
TTGATTGGGGATTTCAGGATGGTAGGCAATGGGGCCGTGGACGAAGTGGTGGACAGGTACTGTTTCTGACCTATGTTACATTGATGACTTGTGGAGTCTACCATCACTTC
CTGTTTATATTTTATTTTGCCTTTTTGTATACAGGTTGGGCTTACATTGCCTTTAAGTTTTCTCCTGAGCCTTGTGGCTATGGAAAGCTAGTTCAGAAAGAGTTAGAAGC
ACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCAGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGAA
GAGATTACCACCACCGCAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTATGAGTCTAGAAGAAACCCCGATCACGAATCCAGA
CCGGAGAAGAATCCAAGGTTCCGGGAGAGTGGTGATTCTGATGAAGAGGATGATGATGACCGAAAGCAGCGACATTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAGAGGACAGCGTCAAGACGCTCTGCAGTCGCTTGCACAACCAGTTTTCCTGGGGGCGCAGAGCGTTTCGTCGCTCTACGGTTTTTCTTTTATAATTAGGGCAGC
AACAAGTGGGTTTTCGGGTTGTAGTGCAGATTTTGTTATTCTAGGGTTCATGGCTTCGTTGTTCAAGGTAAATTGCTTGATTTTTGTGGCCATTGTGGCAAAGGGTATTC
TGAGTATTGTTATTACAATAGGAGACCCATCAAAGCTATCTGTATATCGGGATAGAAGATTTCAAGGAACACAAGATGAATTTGAACACGCACTTCAGACTTCAACTACC
GTTTATGTGGGAAATATGTCCTTTTACACGACGGAAGAGCAAGTTTATGAGCTATTTTCTCGAGCGGGAGAAATTAAGAAGATAATCATGGGCTTGGATAAGAATTCAAA
AACACCTTGTGGTTTTTGTTTTGTCCTATACTATTCTCGGGAGGATACTGAGGATGCTGTAAAATTTATAAGTGGAACGATTCTTGATGATCGTCCTATTCGTGTGGATT
TTGATTGGGGATTTCAGGATGGTAGGCAATGGGGCCGTGGACGAAGTGGTGGACAGGTACTGTTTCTGACCTATGTTACATTGATGACTTGTGGAGTCTACCATCACTTC
CTGTTTATATTTTATTTTGCCTTTTTGTATACAGGTTGGGCTTACATTGCCTTTAAGTTTTCTCCTGAGCCTTGTGGCTATGGAAAGCTAGTTCAGAAAGAGTTAGAAGC
ACAGAGGCAGCTTGTGGATTATGGTACTGGTTCACTAGGCTCTATGCAGCCAGTCATGCCTCAGTATGGAAAACATGGTGGAAGCCACGGACATGGGCATCGTCATGGAA
GAGATTACCACCACCGCAAGCGCTACCGAGATGATGATCGCCATGCCCATGAAAGCTCTAAGAGAACTTCAGATTATGAGTCTAGAAGAAACCCCGATCACGAATCCAGA
CCGGAGAAGAATCCAAGGTTCCGGGAGAGTGGTGATTCTGATGAAGAGGATGATGATGACCGAAAGCAGCGACATTAA
Protein sequenceShow/hide protein sequence
MPRGQRQDALQSLAQPVFLGAQSVSSLYGFSFIIRAATSGFSGCSADFVILGFMASLFKVNCLIFVAIVAKGILSIVITIGDPSKLSVYRDRRFQGTQDEFEHALQTSTT
VYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVLYYSREDTEDAVKFISGTILDDRPIRVDFDWGFQDGRQWGRGRSGGQVLFLTYVTLMTCGVYHHF
LFIFYFAFLYTGWAYIAFKFSPEPCGYGKLVQKELEAQRQLVDYGTGSLGSMQPVMPQYGKHGGSHGHGHRHGRDYHHRKRYRDDDRHAHESSKRTSDYESRRNPDHESR
PEKNPRFRESGDSDEEDDDDRKQRH