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Spg000685 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000685
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSuperoxide dismutase [Cu-Zn]
Genome locationscaffold8:45656879..45657963
RNA-Seq ExpressionSpg000685
SyntenySpg000685
Gene Ontology termsGO:0019430 - removal of superoxide radicals (biological process)
GO:0005840 - ribosome (cellular component)
GO:0004784 - superoxide dismutase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
APO14279.1 superoxide dismutase 3 [Luffa aegyptiaca]1.9e-37100Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

AWW05327.1 superoxide dismutase [Cu-Zn] 1 [Cucurbita pepo]1.1e-2986.02Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+LISASPS YI + PFS S+PPPSL SSFHGASLKLPRHSLSLAAS APKP  VVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

XP_022958658.1 superoxide dismutase [Cu-Zn], chloroplastic [Cucurbita moschata]3.8e-3087.1Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+LISASPS YI + PFS SSPPPSL SSFHGASLKLPRHSLSLAAS APKP  VVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

XP_023534101.1 superoxide dismutase [Cu-Zn], chloroplastic [Cucurbita pepo subsp. pepo]5.0e-3087.1Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+LISASPS YI + PFS SSPPPSL SSFHGASLKLPRHSLSLAAS APKP  VVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

XP_038902141.1 superoxide dismutase [Cu-Zn], chloroplastic [Benincasa hispida]2.4e-3289.25Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+L+S SPSHYI LPPFSNSS PPS +SSFHGASLKLPRHSLSLAAS APKPLAVVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

TrEMBL top hitse value%identityAlignment
A0A1L5JHV7 Superoxide dismutase [Cu-Zn]9.2e-38100Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

A0A2Z4GT64 Superoxide dismutase [Cu-Zn]5.4e-3086.02Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+LISASPS YI + PFS S+PPPSL SSFHGASLKLPRHSLSLAAS APKP  VVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

A0A5A7T2V6 Superoxide dismutase2.7e-2986.02Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+L+S S S+YIALPPFSNSS   SLTSSFHGASLKLPRHSLSLAAS APKPLAVVAA+KKAVAVLKGTS+V+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

A0A6J1H3P6 Superoxide dismutase [Cu-Zn]1.9e-3087.1Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+LISASPS YI + PFS SSPPPSL SSFHGASLKLPRHSLSLAAS APKP  VVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

A0A6J1K3P0 Superoxide dismutase [Cu-Zn]1.9e-3087.1Show/hide
Query:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MQA+LAAMAAQ+LISASPS YI + PFS SSPPPSL SSFHGASLKLPRHSLSLAAS APKP  VVAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

SwissProt top hitse value%identityAlignment
O04997 Superoxide dismutase [Cu-Zn], chloroplastic1.2e-1361.96Show/hide
Query:  MAAQTLISASPSHYIALP-PFSNSSPPPSL-TSSFHGASLK--LPRHSLSL--AASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MAA  ++ +SP+   +L  P SN +   SL +SSFHG SLK  + R SL+L  AASAAPKPL V AATKKAVAVLKGTS+V+GVVTLTQE+D
Subjt:  MAAQTLISASPSHYIALP-PFSNSSPPPSL-TSSFHGASLK--LPRHSLSL--AASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

O65199 Superoxide dismutase [Cu-Zn], chloroplastic2.5e-1661.63Show/hide
Query:  MAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MA  TL+S +PS      P  + +P P L S FHG SLKL R S+ LA   APKPL+VVA TKKAVAVLKGTS+V+GVVTL+QEDD
Subjt:  MAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

P07505 Superoxide dismutase [Cu-Zn], chloroplastic4.7e-1560Show/hide
Query:  MAAQTLISASPSH--YIALPPFSNSSPPPSL-----TSSFHGASLKL--PRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MAA T+++++PSH  +  + PFS S+P  +L     +SSF+G S KL     SLSL+ SAA KPL +VAATKKAVAVLKGTSNV+GVVTLTQEDD
Subjt:  MAAQTLISASPSH--YIALPPFSNSSPPPSL-----TSSFHGASLKL--PRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

P10792 Superoxide dismutase [Cu-Zn], chloroplastic1.2e-1356.04Show/hide
Query:  MAAQTLISASPSHYIALPPF--SNSSPPPSLTSSFHGASLKLPR---HSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MAA T+ + + +    L P   SN++  PSL+SSFHG SLK+      SL+L++  +PKP  V AATKKAVAVLKGTSNV+GVVTLTQ+DD
Subjt:  MAAQTLISASPSHYIALPPF--SNSSPPPSLTSSFHGASLKLPR---HSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

P14831 Superoxide dismutase [Cu-Zn], chloroplastic1.1e-1152.81Show/hide
Query:  MAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPR---HSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD
        MAA ++ + + +    L P S+SS  P++ SSF G SL +      SL+L A   PKPL V AATKKAVAVLKG SNV+GVVTL+Q+DD
Subjt:  MAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPR---HSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDD

Arabidopsis top hitse value%identityAlignment
AT2G28190.1 copper/zinc superoxide dismutase 23.6e-1052.27Show/hide
Query:  AAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASL---KLPR-HSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQED
        A  T+++ S    + +PP SN   P +L SSF G SL    L R  S+S A  A  K L VV+A KKAVAVLKGTS+V+GVVTLTQ+D
Subjt:  AAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASL---KLPR-HSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGCTCTTCTCGCAGCTATGGCGGCCCAAACCCTTATCTCTGCTTCCCCTTCTCACTACATCGCATTGCCCCCCTTCTCAAATTCTTCCCCTCCGCCTTCCCTGAC
CTCCTCCTTCCACGGCGCCTCTCTCAAGCTCCCTCGCCACTCCCTCTCCCTCGCAGCCTCCGCCGCCCCCAAGCCCCTCGCCGTCGTCGCTGCTACCAAGAAAGCCGTCG
CCGTGCTCAAGGGTACTTCCAATGTTGATGGCGTCGTCACGCTAACTCAAGAAGACGATGTTGCGTTGTCTTTTGGTCCTAATGTATTAGTTTGCGCATTAGTTGACTTT
CAAACTTCAGGAGGATAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGCTCTTCTCGCAGCTATGGCGGCCCAAACCCTTATCTCTGCTTCCCCTTCTCACTACATCGCATTGCCCCCCTTCTCAAATTCTTCCCCTCCGCCTTCCCTGAC
CTCCTCCTTCCACGGCGCCTCTCTCAAGCTCCCTCGCCACTCCCTCTCCCTCGCAGCCTCCGCCGCCCCCAAGCCCCTCGCCGTCGTCGCTGCTACCAAGAAAGCCGTCG
CCGTGCTCAAGGGTACTTCCAATGTTGATGGCGTCGTCACGCTAACTCAAGAAGACGATGTTGCGTTGTCTTTTGGTCCTAATGTATTAGTTTGCGCATTAGTTGACTTT
CAAACTTCAGGAGGATAA
Protein sequenceShow/hide protein sequence
MQALLAAMAAQTLISASPSHYIALPPFSNSSPPPSLTSSFHGASLKLPRHSLSLAASAAPKPLAVVAATKKAVAVLKGTSNVDGVVTLTQEDDVALSFGPNVLVCALVDF
QTSGG