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Spg000698 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000698
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold8:42351264..42352562
RNA-Seq ExpressionSpg000698
SyntenySpg000698
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5202463.1 hypothetical protein FRX31_007953 [Thalictrum thalictroides]5.5e-0544.44Show/hide
Query:  MRQLW-KSREK---KKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSK
        MR+LW K REK   +K    +  +  +      +LVR+ S  + N   V +DG  M    K+KSQ QCWKHQC  KKL+RN SILS++SK
Subjt:  MRQLW-KSREK---KKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSK
KAG6604769.1 hypothetical protein SDJN03_02086, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2680.23Show/hide
Query:  MRQLWKSREKKKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSK
        MR+LWKSREKK   D+AES+GH     TAELVRSVSAISRNEA+V KDGGEMV GLKKK QCQCWKHQCGMKKLDRNLS+LSK+SK
Subjt:  MRQLWKSREKKKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSK
TrEMBL top hitse value%identityAlignment
A0A6J5UDI4 Retrotrans_gag domain-containing protein5.0e-0456.6Show/hide
Query:  LVRSVSAI-SRNEADVEK-DGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSIL
        LVR VS +  R E  VE+ + GE+V  LKKK QCQCWKHQC  KKL+R+ S++
Subjt:  LVRSVSAI-SRNEADVEK-DGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSIL
A0A6J5WVM6 Retrotrans_gag domain-containing protein5.0e-0456.6Show/hide
Query:  LVRSVSAI-SRNEADVEK-DGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSIL
        LVR VS +  R E  VE+ + GE+V  LKKK QCQCWKHQC  KKL+R+ S++
Subjt:  LVRSVSAI-SRNEADVEK-DGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSIL
A0A7J6WZH2 Retrotrans_gag domain-containing protein2.7e-0544.44Show/hide
Query:  MRQLW-KSREK---KKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSK
        MR+LW K REK   +K    +  +  +      +LVR+ S  + N   V +DG  M    K+KSQ QCWKHQC  KKL+RN SILS++SK
Subjt:  MRQLW-KSREK---KKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSK
A5C7E6 Retrotrans_gag domain-containing protein8.6e-0441.46Show/hide
Query:  MRQLWKSREKKKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILS
        MR LW   +K+           E      E   SV   SR+    E++G E   G KKKSQCQC KHQC  KKL+RN S+L+
Subjt:  MRQLWKSREKKKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGACAGTTGTGGAAGAGTAGGGAAAAGAAGAAGGCTGTTGATGTGGCGGAGAGCGACGGCCATGAAACGGCGGCGGCTACGGCGGAGCTTGTGAGATCGGTTTCGGC
GATAAGTAGAAATGAAGCGGACGTTGAAAAGGATGGTGGGGAGATGGTGGGTGGTCTAAAGAAGAAGAGTCAGTGTCAGTGTTGGAAGCATCAGTGTGGGATGAAGAAAT
TGGATCGAAACCTTAGCATATTATCAAAGAGTTCTAAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGACAGTTGTGGAAGAGTAGGGAAAAGAAGAAGGCTGTTGATGTGGCGGAGAGCGACGGCCATGAAACGGCGGCGGCTACGGCGGAGCTTGTGAGATCGGTTTCGGC
GATAAGTAGAAATGAAGCGGACGTTGAAAAGGATGGTGGGGAGATGGTGGGTGGTCTAAAGAAGAAGAGTCAGTGTCAGTGTTGGAAGCATCAGTGTGGGATGAAGAAAT
TGGATCGAAACCTTAGCATATTATCAAAGAGTTCTAAAGGCTAA
Protein sequenceShow/hide protein sequence
MRQLWKSREKKKAVDVAESDGHETAAATAELVRSVSAISRNEADVEKDGGEMVGGLKKKSQCQCWKHQCGMKKLDRNLSILSKSSKG