CuGenDBv2

Gene ID	Spg000719
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	C3H1-type domain-containing protein
Genome location	scaffold8:45241294..45246447
RNA-Seq Expression	Spg000719
Synteny	Spg000719
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR000504 - RNA recognition motif domain IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily IPR035979 - RNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6605546.1 Zinc finger CCCH domain-containing protein 24, partial [Cucurbita argyrosperma subsp. sororia]

6.1e-84

51.23

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Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q + F+SAKKKKGMTVGFV FESTE+LKSAVEEL+GKTIG KNLKVAD+IPRSFDKTI+SS DRDN  + SVAVS+SSNDGEDA +IN GN +PNDS SK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAREVVAPLAHMSYSDQLDHKKNSL+Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR PRK IDS +SD+ ISEVMLIVQVCSVGVECELMT+E+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEGA               H QGISNAAPADTPL+PLTIPNVHGAE EA+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

XP_022958090.1 zinc finger CCCH domain-containing protein 24 [Cucurbita moschata]

1.5e-85

51.96

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Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q + F+SAKKKKGMTVGFV FESTEQLKSAVEEL+GKTIG KNLKVAD+IPRSFDKTI+SS DRDN  + SVAVS+SSNDGEDA +IN GN +PNDSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAREVVAPLAHMSYSDQLDHKKNSL+Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR PRK IDSA+SD+ ISEVMLIVQVCSVGVECELMT+E+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEGA               H QGISNAAPADTPL+PLTIPNVHGAE EA+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

XP_022995395.1 zinc finger CCCH domain-containing protein 24 [Cucurbita maxima]

4.2e-85

51.72

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Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q + F+SAKKKKGMTVGFV FESTEQLKSAVEEL+GKTIG KNLKVAD+IPRSFDKTI+SS DRDN  + SVAVSLSSNDGED  NIN GN +PNDSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         +SAREVVAPLAHMSYSDQLDHKKNSLSQ                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR PRK IDS NSD+ ISEVMLIVQVCS+GVECELMT+E+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEGA               H QGISNAAPADTPL+PLTIPNVHG+E EA+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

XP_023534370.1 zinc finger CCCH domain-containing protein 24 [Cucurbita pepo subsp. pepo]

5.0e-86

52.45

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Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q I F+SAKKKKGMTVGFV FESTEQLKSAVEEL+GKTIG KNLKVAD+IPRSFDKTI+SS DRDN  + SVAVSLSSNDGEDA +IN GN +PNDSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAREVVAPLAHMSYSDQLDHKKNSL+Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR PRK IDS NSD+ ISEVMLIVQVCSVGVECELMT+E+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEGA               H QGISNAAPADTPL+PLTIPNVHGAE EA+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

XP_038901963.1 zinc finger CCCH domain-containing protein 24 [Benincasa hispida]

4.7e-84

51.72

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Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        QSILF  AKKKKGMTVGFV+F+STEQLKS+VEEL+GK IGKKNLKVAD+IPRSF+KTIKS +D DN+   SV VSL+SNDGEDAANINDG+S P+DSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
        GKSAREVVAPLAHMSYSDQLDHKKNSL                                                                         
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR P KLIDS NSDA+ISEVMLIVQVCSVGVECELMTSE+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEG+               H QGISNAAP DTPL+PLTIP VHGAE EA NDA   RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KDA7 C3H1-type domain-containing protein

8.1e-82

50.86

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Query:  SILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSKG
        S+LFKSAKKKKGMTVGFV+FESTEQL+S+VEEL+GK IGKKNLKVAD+IPRSF+K IKSS+D DN+   S A SLSSNDGEDA NINDG+S PNDSV KG
Subjt:  SILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSKG

Query:  KSAREVVAPLAHMSYSDQLDHKKNSLSQ------------------------------------------------------------------------
        KSAREVVAPLAHMSYSDQLDHKKNSL                                                                          
Subjt:  KSAREVVAPLAHMSYSDQLDHKKNSLSQ------------------------------------------------------------------------

Query:  -----------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRLT
                                                             VREGR P KLIDS NSDA+ISEVMLIVQVCSVGVE ELMTSE+KRL 
Subjt:  -----------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRLT

Query:  QAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLGP
        QAFAEG+               H QGISNAAPADTPL+PLTIP VH  E EA+NDA   RI                 QVNTLAAEKLYSLAGDWA LGP
Subjt:  QAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLGP

Query:  ETLLFDI
        +TLLFDI
Subjt:  ETLLFDI

A0A5D3CSW9 Zinc finger CCCH domain-containing protein 24

8.1e-82

50.74

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        QS+LFKSAKKKKGMTVGFV+FESTEQL+S+VEEL+GK IGKKNLKVAD+IPRSF+K IKSSMD DN+   S A SL S+DG+DA NINDG+S PNDSV K
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
        GKSAREVVAPLAHMSYSDQLDHKKNSL                                                                         
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR P KLIDS NSDA+ISEVMLIVQVCSVGVE ELMTSE+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEG+               H QGISNAAPADTPL+PLTIP VH AE EA+NDA   RI                 QVNTLAAEKLYSLAGDWA LG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

A0A6J1CGT5 zinc finger CCCH domain-containing protein 24

1.5e-83

50.74

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q I+FKSAKKKKGMTVGFV+FESTEQLKSAVEE+EGKTIGKKNLKVAD+IPRSF+KT +S MDR  T E S+ V LSSND EDA N NDGNS PNDSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
        GKSAR+VVAPLAHMSYSDQLDHKKNSLSQ                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR P KLIDS NSD  ISEVM+IVQVCSVGVECEL+ SE+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         Q FAEGA               H QGISNAAPADTPL+PL IP VHG EP+A+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

A0A6J1H2G6 zinc finger CCCH domain-containing protein 24

7.1e-86

51.96

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q + F+SAKKKKGMTVGFV FESTEQLKSAVEEL+GKTIG KNLKVAD+IPRSFDKTI+SS DRDN  + SVAVS+SSNDGEDA +IN GN +PNDSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAREVVAPLAHMSYSDQLDHKKNSL+Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR PRK IDSA+SD+ ISEVMLIVQVCSVGVECELMT+E+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEGA               H QGISNAAPADTPL+PLTIPNVHGAE EA+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

A0A6J1K3X1 zinc finger CCCH domain-containing protein 24

2.1e-85

51.72

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q + F+SAKKKKGMTVGFV FESTEQLKSAVEEL+GKTIG KNLKVAD+IPRSFDKTI+SS DRDN  + SVAVSLSSNDGED  NIN GN +PNDSVSK
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         +SAREVVAPLAHMSYSDQLDHKKNSLSQ                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR PRK IDS NSD+ ISEVMLIVQVCS+GVECELMT+E+KRL
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG
         QAFAEGA               H QGISNAAPADTPL+PLTIPNVHG+E EA+ND    RI                 QVNTLAAEKLYSLAGDWAGLG
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIPNVHGAEPEASNDA---RIF--------------LPQVNTLAAEKLYSLAGDWAGLG

Query:  PETLLFDI
        P+TLLFDI
Subjt:  PETLLFDI

SwissProt top hits

e value

%identity

Alignment

Q8L7S3 Zinc finger CCCH domain-containing protein 24

2.1e-31

29.02

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q +L+KSAKK++GM VGFVTFE+ EQL+S VE L+GKT+   NLK+AD++PR+FDK                                      ND+   
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAR+ V PLA++SY+DQL+ KK S+ Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR P    +  ++   I+EVML+VQVC  G +   + +E++ L
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIP-NVHGAEPEAS----NDARIF--------------LPQVNTLAAEKLYSLAGDWAG
         +AFAEGA               +  GISN AP D PL+ L IP + +G + E +     +ARI                 QVNT+ AEKLYS+AGDWA 
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIP-NVHGAEPEAS----NDARIF--------------LPQVNTLAAEKLYSLAGDWAG

Query:  LGPETLLFDI
        LGP+TLLFD+
Subjt:  LGPETLLFDI

Arabidopsis top hits

e value

%identity

Alignment

AT2G28450.1 zinc finger (CCCH-type) family protein

1.5e-32

29.02

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q +L+KSAKK++GM VGFVTFE+ EQL+S VE L+GKT+   NLK+AD++PR+FDK                                      ND+   
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAR+ V PLA++SY+DQL+ KK S+ Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR P    +  ++   I+EVML+VQVC  G +   + +E++ L
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIP-NVHGAEPEAS----NDARIF--------------LPQVNTLAAEKLYSLAGDWAG
         +AFAEGA               +  GISN AP D PL+ L IP + +G + E +     +ARI                 QVNT+ AEKLYS+AGDWA 
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIP-NVHGAEPEAS----NDARIF--------------LPQVNTLAAEKLYSLAGDWAG

Query:  LGPETLLFDI
        LGP+TLLFD+
Subjt:  LGPETLLFDI

AT2G28450.2 zinc finger (CCCH-type) family protein

1.5e-32

29.02

Show/hide

Query:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK
        Q +L+KSAKK++GM VGFVTFE+ EQL+S VE L+GKT+   NLK+AD++PR+FDK                                      ND+   
Subjt:  QSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSK

Query:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------
         KSAR+ V PLA++SY+DQL+ KK S+ Q                                                                       
Subjt:  GKSAREVVAPLAHMSYSDQLDHKKNSLSQ-----------------------------------------------------------------------

Query:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL
                                                              VREGR P    +  ++   I+EVML+VQVC  G +   + +E++ L
Subjt:  ------------------------------------------------------VREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRL

Query:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIP-NVHGAEPEAS----NDARIF--------------LPQVNTLAAEKLYSLAGDWAG
         +AFAEGA               +  GISN AP D PL+ L IP + +G + E +     +ARI                 QVNT+ AEKLYS+AGDWA 
Subjt:  TQAFAEGA---------------HDQGISNAAPADTPLEPLTIP-NVHGAEPEAS----NDARIF--------------LPQVNTLAAEKLYSLAGDWAG

Query:  LGPETLLFDI
        LGP+TLLFD+
Subjt:  LGPETLLFDI

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTCTTTTTTGCAGAGTATTCTTTTTAAATCCGCAAAGAAGAAGAAAGGCATGACTGTAGGTTTTGTTACTTTTGAAAGTACAGAACAGTTGAAAAGTGCTGTTGA
GGAGTTAGAAGGAAAAACCATTGGCAAAAAGAATTTGAAGGTTGCAGACATGATTCCCAGATCATTTGATAAGACAATTAAATCATCAATGGATCGAGATAATACCTATG
AACCTTCAGTGGCAGTCTCTTTATCATCAAATGATGGTGAAGATGCTGCTAACATAAATGATGGGAATTCTATTCCTAATGATTCAGTTTCGAAGGGAAAAAGTGCACGT
GAAGTGGTGGCTCCTCTTGCTCACATGTCATACAGTGATCAGTTGGATCATAAAAAGAACTCATTGTCGCAGGTTCGAGAAGGACGGATTCCAAGGAAGTTGATTGATTC
TGCTAATTCTGATGCAACCATCAGTGAGGTCATGCTTATCGTTCAGGTCTGCTCTGTAGGTGTTGAGTGTGAACTAATGACCAGTGAGTACAAGAGACTTACTCAAGCTT
TTGCTGAAGGAGCTCATGACCAAGGAATATCAAATGCAGCACCTGCTGATACTCCACTGGAGCCCCTAACCATTCCTAATGTCCATGGCGCTGAACCGGAGGCCTCTAAT
GATGCTAGAATCTTTTTGCCCCAGGTGAATACACTTGCTGCTGAGAAGCTGTATTCACTTGCTGGGGATTGGGCTGGGTTAGGGCCTGAGACCTTGCTATTTGATATTGG
GAAAAGTCATTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSSFLQSILFKSAKKKKGMTVGFVTFESTEQLKSAVEELEGKTIGKKNLKVADMIPRSFDKTIKSSMDRDNTYEPSVAVSLSSNDGEDAANINDGNSIPNDSVSKGKSAR
EVVAPLAHMSYSDQLDHKKNSLSQVREGRIPRKLIDSANSDATISEVMLIVQVCSVGVECELMTSEYKRLTQAFAEGAHDQGISNAAPADTPLEPLTIPNVHGAEPEASN
DARIFLPQVNTLAAEKLYSLAGDWAGLGPETLLFDIGKSH

Spg000719 (gene) of Sponge gourd (cylindrica) v1 genome