CuGenDBv2

Gene ID	Spg000736
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	RING-type domain-containing protein
Genome location	scaffold8:46822314..46826368
RNA-Seq Expression	Spg000736
Synteny	Spg000736
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6605938.1 hypothetical protein SDJN03_03255, partial [Cucurbita argyrosperma subsp. sororia]

1.7e-74

72.48

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EIQGTGHGSHDG CAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIVEDREETY+DP+EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVR GRQEARPV+R TVP  AGASSSREP KKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGRK
        DKAAAAKHQEHLARFGRK
Subjt:  DKAAAAKHQEHLARFGRK

XP_022153003.1 uncharacterized protein LOC111020607 [Momordica charantia]

1.4e-73

71.43

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +++GKK EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        L+VEDREETYDDPEEYYPYEDDDEE EE YLGASSSLRIGNRRWGDNGYVRAGRQEARP+ RP+VPEFA ASSSREP KKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGR
        DKAAAAKHQEHLAR GR
Subjt:  DKAAAAKHQEHLARFGR

XP_022958365.1 uncharacterized protein LOC111459609 [Cucurbita moschata]

1.4e-73

72.02

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EIQGTGHGSHDG CAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIVEDREETY+DP+EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVR GRQEARPV+R TVP  AGASSSREP KKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGRK
        DKAAAAKHQE LARFGRK
Subjt:  DKAAAAKHQEHLARFGRK

XP_022995136.1 uncharacterized protein LOC111490767 [Cucurbita maxima]

1.3e-74

72.48

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EI GTGHGSHDG CAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIVEDREETY+DP+EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVR GRQEARPV+R TVP  AGASSSREPIKKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGRK
        DKAAAAKHQEHLARFGRK
Subjt:  DKAAAAKHQEHLARFGRK

XP_023533579.1 uncharacterized protein LOC111795401 [Cucurbita pepo subsp. pepo]

2.2e-74

72.48

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EIQGTGHGSHDG CAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIVEDREETY+DP+EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVR GRQEARPV+R TVP  AGASSSREPIKKD SKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGRK
        DKAAAAKHQEHLARFGRK
Subjt:  DKAAAAKHQEHLARFGRK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KK15 RING-type domain-containing protein

5.2e-66

67.87

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY                         +L+V                     RASWYKP
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPE--EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDA-SKDKTGRRAKRALKR
         I+E+REETYDDPE  +YYPYEDDDEE E+AYLG S SLRIGNRRWG NGYVRAGRQEARPVLR    EF G SSSREP+ K A SKDKTGRRAKRALKR
Subjt:  LIVEDREETYDDPE--EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDA-SKDKTGRRAKRALKR

Query:  EAADKAAAAKHQEHLARFGRK
        EAADKAAAAKHQEHLARFGRK
Subjt:  EAADKAAAAKHQEHLARFGRK

A0A6J1DGD3 uncharacterized protein LOC111020607

6.8e-74

71.43

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +++GKK EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        L+VEDREETYDDPEEYYPYEDDDEE EE YLGASSSLRIGNRRWGDNGYVRAGRQEARP+ RP+VPEFA ASSSREP KKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGR
        DKAAAAKHQEHLAR GR
Subjt:  DKAAAAKHQEHLARFGR

A0A6J1FXD4 uncharacterized protein LOC111448431

1.0e-69

70.37

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EM KK EIQGTGHGSHDGACAICLNKI+L ETALVRGCEHAY                         +L+V                     RASWY+P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIV+DREETYDDPEEYYPYED DEE EEAYLGAS SLRIGNRRWGDNGYVRAGRQEARPVLR   PEF+GASSSREP  KDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFG
        DKAAAAKHQEHLARFG
Subjt:  DKAAAAKHQEHLARFG

A0A6J1H396 uncharacterized protein LOC111459609

6.8e-74

72.02

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EIQGTGHGSHDG CAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIVEDREETY+DP+EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVR GRQEARPV+R TVP  AGASSSREP KKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGRK
        DKAAAAKHQE LARFGRK
Subjt:  DKAAAAKHQEHLARFGRK

A0A6J1K158 uncharacterized protein LOC111490767

6.1e-75

72.48

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Query:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP
        +EMGKK EI GTGHGSHDG CAICLNKIALQETALVRGCEHAY                         +L+V                     RASWY P
Subjt:  MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKP

Query:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA
        LIVEDREETY+DP+EYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVR GRQEARPV+R TVP  AGASSSREPIKKDASKDKTGRRAKRALKREAA
Subjt:  LIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAA

Query:  DKAAAAKHQEHLARFGRK
        DKAAAAKHQEHLARFGRK
Subjt:  DKAAAAKHQEHLARFGRK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G12310.1 RING/U-box superfamily protein

1.7e-21

51.06

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Query:  RASWYKPLIVEDR-------EETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFA-----GASSSREPIKKD
        RASW++PL   +R          +D P EY   ++DD++ +E Y+   SSLR+GNRRWGDNG+VRAGRQEARPV        A      +SSS EP K+ 
Subjt:  RASWYKPLIVEDR-------EETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLRPTVPEFA-----GASSSREPIKKD

Query:  ASKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK
         S   TGRRAKRA+KREAA+KA    AAAKH+  L R GRK
Subjt:  ASKDKTGRRAKRALKREAADKA----AAAKHQEHLARFGRK

AT5G12310.1 RING/U-box superfamily protein

4.1e-07

72.41

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Query:  GSHDGACAICLNKIALQETALVRGCEHAY
        G+H G CAICL+ I LQETA+V+GCEHAY
Subjt:  GSHDGACAICLNKIALQETALVRGCEHAY

AT5G19430.1 RING/U-box superfamily protein

6.4e-32

42.86

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Query:  EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKPLIVEDRE
        EI     G+H G CAICL++I LQETA+V+GCEH Y                         +L V                     RASW+ PL V ++ 
Subjt:  EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKPLIVEDRE

Query:  E----TYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLR-----PTVPEFAGASSSREPIKKDASKDKTGRRAKRALKRE
              +DD +  Y YED+D++ +E YL   SSLRIGNRRWG NG+VR+GRQEARPV R      +    +G+SSS    K+  + + TGRRAKRA+KRE
Subjt:  E----TYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLR-----PTVPEFAGASSSREPIKKDASKDKTGRRAKRALKRE

Query:  AADKA----AAAKHQEHLARFGRK
        AA+KA    AAAKH+ HL R GRK
Subjt:  AADKA----AAAKHQEHLARFGRK

AT5G19430.2 RING/U-box superfamily protein

6.4e-32

42.86

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Query:  EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKPLIVEDRE
        EI     G+H G CAICL++I LQETA+V+GCEH Y                         +L V                     RASW+ PL V ++ 
Subjt:  EIQGTGHGSHDGACAICLNKIALQETALVRGCEHAY-------------------------WLLVFNG------------------RASWYKPLIVEDRE

Query:  E----TYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLR-----PTVPEFAGASSSREPIKKDASKDKTGRRAKRALKRE
              +DD +  Y YED+D++ +E YL   SSLRIGNRRWG NG+VR+GRQEARPV R      +    +G+SSS    K+  + + TGRRAKRA+KRE
Subjt:  E----TYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAGRQEARPVLR-----PTVPEFAGASSSREPIKKDASKDKTGRRAKRALKRE

Query:  AADKA----AAAKHQEHLARFGRK
        AA+KA    AAAKH+ HL R GRK
Subjt:  AADKA----AAAKHQEHLARFGRK

Sequences

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CDS sequence

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ATGAAGCAGCTACTGATACAGCGTAACCGCGAATCTTTGCGAGAGCTTGAAGCGCAACTCCGCCCTATTGCCGCCCTGCATAGCTTAGCGAGGAAGATCGGAGCGGAGGA
GAAGCCCTCGTGTTCTCGCCATGAGTTCTTCGGGAATCTCTGTCCAAACCGCCGAATTGTCAGATGCCGTTCAAGACCTAAAAGTTTGCGACCAGGAAGTATATGGGTTA
TACGAATTGAATTTGTGTGCGTGCTTGCTTGTTTGGCTATGAGGCTTCATAGGAAGCTGAAGCTATTGTTCATATTCATTGATTTCCGTTATCCGATTGCCGGTGGTTGG
ATGGAAATGGGAAAAAAGGCAGAGATTCAGGGAACGGGGCATGGGAGTCACGATGGGGCTTGTGCCATTTGCTTAAATAAGATAGCTCTTCAAGAAACTGCCTTAGTGAG
AGGTTGCGAGCACGCCTATTGGTTGCTGGTATTTAATGGAAGAGCTTCGTGGTATAAACCACTGATTGTTGAAGATCGAGAGGAAACATATGATGATCCTGAGGAATACT
ATCCTTATGAGGATGACGATGAAGAGTTTGAGGAAGCTTACCTGGGTGCATCATCAAGTCTCCGTATCGGCAATCGGAGGTGGGGAGACAATGGATATGTGAGGGCTGGT
CGACAAGAAGCACGACCAGTTCTTAGGCCAACTGTTCCAGAGTTTGCAGGAGCTAGCTCGTCACGTGAGCCTATAAAGAAAGATGCTTCCAAAGATAAAACAGGTCGACG
AGCTAAAAGGGCCTTGAAACGGGAAGCTGCTGATAAAGCCGCAGCAGCTAAACACCAGGAGCATCTAGCTAGGTTCGGCCGGAAGTGA

mRNA sequence

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Protein sequence

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MKQLLIQRNRESLRELEAQLRPIAALHSLARKIGAEEKPSCSRHEFFGNLCPNRRIVRCRSRPKSLRPGSIWVIRIEFVCVLACLAMRLHRKLKLLFIFIDFRYPIAGGW
MEMGKKAEIQGTGHGSHDGACAICLNKIALQETALVRGCEHAYWLLVFNGRASWYKPLIVEDREETYDDPEEYYPYEDDDEEFEEAYLGASSSLRIGNRRWGDNGYVRAG
RQEARPVLRPTVPEFAGASSSREPIKKDASKDKTGRRAKRALKREAADKAAAAKHQEHLARFGRK

Spg000736 (gene) of Sponge gourd (cylindrica) v1 genome