; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000738 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000738
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionhistone H4
Genome locationscaffold8:44585307..44588014
RNA-Seq ExpressionSpg000738
SyntenySpg000738
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0015979 - photosynthesis (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005654 - nucleoplasm (cellular component)
GO:0009507 - chloroplast (cellular component)
GO:0009521 - photosystem (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsIPR001951 - Histone H4
IPR009072 - Histone-fold
IPR019809 - Histone H4, conserved site
IPR035425 - CENP-T/Histone H4, histone fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570719.1 hypothetical protein SDJN03_29634, partial [Cucurbita argyrosperma subsp. sororia]1.2e-5084.96Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSWVRSSGSAGSLLWCTDSDMDSFQGVKRRAEV
               G AG LLW  DSD+DSF G +R A +
Subjt:  VSWVRSSGSAGSLLWCTDSDMDSFQGVKRRAEV

KAG7010565.1 hypothetical protein SDJN02_27359, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-5084.96Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSWVRSSGSAGSLLWCTDSDMDSFQGVKRRAEV
               G AG LLW  DSD+DSF G +R A +
Subjt:  VSWVRSSGSAGSLLWCTDSDMDSFQGVKRRAEV

RVW65980.1 Histone H4 [Vitis vinifera]1.9e-4597.09Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSW
          W
Subjt:  VSW

XP_020162652.2 histone H4 [Aegilops tauschii subsp. strangulata]3.3e-4591.89Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSWVRSSGSAG
            R  GS G
Subjt:  VSWVRSSGSAG

XP_041569802.1 uncharacterized protein LOC105758485 [Taeniopygia guttata]4.3e-4587.61Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK+FLENVIRDAVTYTEHA+RKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSWVRSSGSAGSL
           ++ +G +G+L
Subjt:  VSWVRSSGSAGSL

TrEMBL top hitse value%identityAlignment
A0A438KP75 Histone H49.4e-4697.09Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSW
          W
Subjt:  VSW

A0A453CKJ2 Histone H41.6e-4591.89Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSWVRSSGSAG
            R  GS G
Subjt:  VSWVRSSGSAG

A0A4Y7KZ51 Multifunctional fusion protein3.6e-4565.71Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHP

Query:  VSWVRSSGSAGSLLWCTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICWSHHSSSLVPVYLSGVFPVD
              + +A S          +   V R+    K A + +S     D +     +S  S    P YL+G FP D
Subjt:  VSWVRSSGSAGSLLWCTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICWSHHSSSLVPVYLSGVFPVD

A0A7J6ELM7 Histone H42.7e-4568.42Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH-
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH-

Query:  ------------PVSWVRSSGSAGSLLW--CTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICW
                    P   +RSS ++ S  W  C    MD  Q    R  + K+  +  S S SLDM ++ + W
Subjt:  ------------PVSWVRSSGSAGSLLW--CTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICW

A0A7J6H3M1 Histone H42.7e-4568.42Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH-
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+ 
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH-

Query:  ------------PVSWVRSSGSAGSLLW--CTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICW
                    P   +RSS ++ S  W  C    MD  Q    R  + K+  +  S S SLDM  + + W
Subjt:  ------------PVSWVRSSGSAGSLLW--CTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICW

SwissProt top hitse value%identityAlignment
P59259 Histone H41.1e-4698.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

P62785 Histone H4 variant TH0111.1e-4698.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

Q6LAF3 Histone H41.1e-4698.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

Q6PMI5 Histone H41.1e-4698.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

Q6WZ83 Histone H41.1e-4698.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

Arabidopsis top hitse value%identityAlignment
AT1G07660.1 Histone superfamily protein7.6e-4898.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

AT1G07820.1 Histone superfamily protein7.6e-4898.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

AT1G07820.2 Histone superfamily protein7.6e-4898.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

AT2G28740.1 histone H47.6e-4898.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH

AT3G45930.1 Histone superfamily protein7.6e-4898.99Show/hide
Query:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH
        MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTL+
Subjt:  MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGCCGTGGAAAGGGAGGCAAGGGCCTGGGAAAGGGCGGAGCAAAGCGTCACAGGAAGGTTTTGAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCG
TTTGGCTCGTAGAGGTGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTTACCTACA
CTGAGCACGCTAGGAGGAAGACGGTGACTGCCATGGATGTGGTTTATGCCTTGAAAAGGCAGGGAAGGACTTTGCATCCTGTTTCGTGGGTGAGGTCTTCAGGCTCTGCA
GGTTCTTTGCTATGGTGCACGGATTCAGACATGGATTCCTTCCAAGGTGTCAAAAGGCGAGCAGAAGTTAGCAAAATGGCCATTAACTTCTCTTCTTATTCTGATTCTCT
CGATATGCTTTCTATCTCGATTTGTTGGTCTCATCACTCATCTTCACTTGTTCCTGTGTATTTGTCTGGTGTGTTTCCTGTTGATGGCTTGTATAATCGGCTTTTCGACT
TGCATCAATTAGGACTTAAAGGAGCACTCCTTGCTATGATGGGATTATGTAATGTATATGAATGGATCACTGATTATATTAGTAGTGGTTGTTCACATACTTGTGAAGGT
ATTCGACGTCGAAGCGTGGCGGATGTCGAGGCGCTTGCAGCTGGGTTCGAGGCATTGGTGTATTCCCATCGTTTGCTTGATAGTTTGGTCGACCAAATTTTTCAGAACTT
GTCCAGCTTGTGGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCTGGCCGTGGAAAGGGAGGCAAGGGCCTGGGAAAGGGCGGAGCAAAGCGTCACAGGAAGGTTTTGAGAGATAACATTCAGGGCATTACCAAGCCTGCAATTCGCCG
TTTGGCTCGTAGAGGTGGCGTCAAGCGTATCAGTGGATTGATCTATGAAGAAACCAGAGGGGTTTTGAAGATTTTCCTCGAGAATGTGATTCGCGATGCTGTTACCTACA
CTGAGCACGCTAGGAGGAAGACGGTGACTGCCATGGATGTGGTTTATGCCTTGAAAAGGCAGGGAAGGACTTTGCATCCTGTTTCGTGGGTGAGGTCTTCAGGCTCTGCA
GGTTCTTTGCTATGGTGCACGGATTCAGACATGGATTCCTTCCAAGGTGTCAAAAGGCGAGCAGAAGTTAGCAAAATGGCCATTAACTTCTCTTCTTATTCTGATTCTCT
CGATATGCTTTCTATCTCGATTTGTTGGTCTCATCACTCATCTTCACTTGTTCCTGTGTATTTGTCTGGTGTGTTTCCTGTTGATGGCTTGTATAATCGGCTTTTCGACT
TGCATCAATTAGGACTTAAAGGAGCACTCCTTGCTATGATGGGATTATGTAATGTATATGAATGGATCACTGATTATATTAGTAGTGGTTGTTCACATACTTGTGAAGGT
ATTCGACGTCGAAGCGTGGCGGATGTCGAGGCGCTTGCAGCTGGGTTCGAGGCATTGGTGTATTCCCATCGTTTGCTTGATAGTTTGGTCGACCAAATTTTTCAGAACTT
GTCCAGCTTGTGGATTTAG
Protein sequenceShow/hide protein sequence
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKIFLENVIRDAVTYTEHARRKTVTAMDVVYALKRQGRTLHPVSWVRSSGSA
GSLLWCTDSDMDSFQGVKRRAEVSKMAINFSSYSDSLDMLSISICWSHHSSSLVPVYLSGVFPVDGLYNRLFDLHQLGLKGALLAMMGLCNVYEWITDYISSGCSHTCEG
IRRRSVADVEALAAGFEALVYSHRLLDSLVDQIFQNLSSLWI