CuGenDBv2

Gene ID	Spg000808
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Nuclear transcription factor Y subunit B-3
Genome location	scaffold8:40259451..40259975
RNA-Seq Expression	Spg000808
Synteny	Spg000808
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

TYK11971.1 uncharacterized protein E5676_scaffold177G001550 [Cucumis melo var. makuwa]

2.0e-59

75.81

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Query:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE
        MSM+YFSISKR+SLPI+KFV     EEEE++KE+TF S    SS     TT DLLSESECADDNFTTTEESEVEWP+FD     A++P RSDDGSISDEE
Subjt:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVD     EDED++D  FR QKLSDF  QKKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_008464163.1 PREDICTED: uncharacterized protein LOC103502111 [Cucumis melo]

2.0e-59

75.81

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Query:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE
        MSM+YFSISKR+SLPI+KFV     EEEE++KE+TF S    SS     TT DLLSESECADDNFTTTEESEVEWP+FD     A++P RSDDGSISDEE
Subjt:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVD     EDED++D  FR QKLSDF  QKKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_022140584.1 uncharacterized protein LOC111011203 [Momordica charantia]

9.5e-65

82.16

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Query:  MSMVYFSISKRNSL------PIEKFVEEEEE--EKEVTFVSGRKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEES
        MSM+YF+ISKRNSL      PIEKFVEEEEE  E EV+F S +KFSS    TGDLLSESECADDNFTTTEESEVEWPF DR+TA NPDRS DGSISDEES
Subjt:  MSMVYFSISKRNSL------PIEKFVEEEEE--EKEVTFVSGRKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEES

Query:  LIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        LIEIALPTGHYVSHKF     DD+EEDED++DMSF LQKLSDFQKQ KNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_022943897.1 uncharacterized protein LOC111448485 [Cucurbita moschata]

6.0e-59

75.96

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Query:  MSMVYFSISKRNSLPIEKFV--EEEEEEKEVTFVSG--RKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEI
        MSM+YFSISK N  P+ K +  ++++E+KE+TF+S   R FSS    T DLLSESECADDNFTTTEESEVEWPFFDRSTA N  RSDDGSISDEESLIEI
Subjt:  MSMVYFSISKRNSLPIEKFV--EEEEEEKEVTFVSG--RKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEI

Query:  ALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQ--KQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ALPTGHYVSHK DD DDDDE+      DMSF  QKLS+FQ  K+KKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQ--KQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

XP_038902685.1 uncharacterized protein LOC120089322 [Benincasa hispida]

1.2e-62

77.54

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Query:  MSMVYFSISKRNSLPIEKFV------EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRSTAK--NPDRSDDGSISDE
        MSM+YFSISKRNSLPI+KFV      EEEE++K++TF S    SS     TTGDLLSESECADDNFTTTEESEVEWP+FD  + K  NPDRSDDGSISDE
Subjt:  MSMVYFSISKRNSLPIEKFV------EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRSTAK--NPDRSDDGSISDE

Query:  ESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ESLIEIALPTGHYVSHKFDDVDD+DE+       MSFR QKLSDF  QKKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CMD0 uncharacterized protein LOC103502111

9.9e-60

75.81

Show/hide

Query:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE
        MSM+YFSISKR+SLPI+KFV     EEEE++KE+TF S    SS     TT DLLSESECADDNFTTTEESEVEWP+FD     A++P RSDDGSISDEE
Subjt:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVD     EDED++D  FR QKLSDF  QKKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5A7UY43 Uncharacterized protein

6.4e-59

73.06

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Query:  MSMVYFSISKRNSLPIEKFV------------EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDD
        MSM+YFSISKR+SLPI+KFV            EEEE++KE+TF S    SS     TT DLLSESECADDNFTTTEESEVEWP+FD     A++P RSDD
Subjt:  MSMVYFSISKRNSLPIEKFV------------EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDD

Query:  GSISDEESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        GSISDEESLIEIALPTGHYVS KFDDVD     EDED++D  FR QKLSDF  QKKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  GSISDEESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A5D3CJH9 Uncharacterized protein

9.9e-60

75.81

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Query:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE
        MSM+YFSISKR+SLPI+KFV     EEEE++KE+TF S    SS     TT DLLSESECADDNFTTTEESEVEWP+FD     A++P RSDDGSISDEE
Subjt:  MSMVYFSISKRNSLPIEKFV-----EEEEEEKEVTFVSGRKFSS-----TTGDLLSESECADDNFTTTEESEVEWPFFDRS--TAKNPDRSDDGSISDEE

Query:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        SLIEIALPTGHYVS KFDDVD     EDED++D  FR QKLSDF  QKKNLVE+LAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  SLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1CG35 uncharacterized protein LOC111011203

4.6e-65

82.16

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Query:  MSMVYFSISKRNSL------PIEKFVEEEEE--EKEVTFVSGRKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEES
        MSM+YF+ISKRNSL      PIEKFVEEEEE  E EV+F S +KFSS    TGDLLSESECADDNFTTTEESEVEWPF DR+TA NPDRS DGSISDEES
Subjt:  MSMVYFSISKRNSL------PIEKFVEEEEE--EKEVTFVSGRKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEES

Query:  LIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        LIEIALPTGHYVSHKF     DD+EEDED++DMSF LQKLSDFQKQ KNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  LIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

A0A6J1FUA8 uncharacterized protein LOC111448485

2.9e-59

75.96

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Query:  MSMVYFSISKRNSLPIEKFV--EEEEEEKEVTFVSG--RKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEI
        MSM+YFSISK N  P+ K +  ++++E+KE+TF+S   R FSS    T DLLSESECADDNFTTTEESEVEWPFFDRSTA N  RSDDGSISDEESLIEI
Subjt:  MSMVYFSISKRNSLPIEKFV--EEEEEEKEVTFVSG--RKFSST---TGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEI

Query:  ALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQ--KQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
        ALPTGHYVSHK DD DDDDE+      DMSF  QKLS+FQ  K+KKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
Subjt:  ALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQ--KQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G04480.1 unknown protein

2.3e-16

45.28

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Query:  DRSTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYS
        + +  K  +  DDG+I D+ESLIE++LP+GHY+ H ++            + +  +   K+ DF+     L +LL EIND  EE+NLIEIDIS+GSIKYS
Subjt:  DRSTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYS

Query:  RFEIEA
        RFEI+A
Subjt:  RFEIEA

AT5G35870.1 unknown protein

1.1e-10

35.66

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Query:  VSGRKFSSTTGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSD
        +S +K +S   DL  +    +   ++T  +++          KN D  DDG+I DEESLIE++LP+GHY+ H +  +    +++   +N   FR      
Subjt:  VSGRKFSSTTGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDDDDEEEDEDDNDMSFRLQKLSD

Query:  FQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA
               L++L AE     E++NLIEIDIS+GSIK SRF+I+A
Subjt:  FQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

Sequences

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CDS sequence

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ATGTCTATGGTTTATTTTTCAATCTCCAAAAGAAATTCGCTTCCGATTGAGAAATTTGTTGAAGAAGAAGAAGAAGAAAAGGAAGTGACTTTTGTTTCTGGCCGGAAATT
CTCGTCGACGACCGGAGATTTGCTGTCGGAGAGTGAATGTGCCGATGATAATTTCACGACCACCGAGGAATCTGAAGTGGAGTGGCCGTTTTTCGACCGGTCGACTGCGA
AAAACCCGGACCGGTCCGATGATGGTTCGATTTCCGACGAGGAAAGCTTGATCGAAATCGCTCTCCCGACCGGACATTACGTCAGCCACAAGTTCGATGACGTGGACGAC
GACGATGAAGAAGAAGACGAAGACGACAACGACATGTCGTTTCGTTTGCAGAAGCTGTCGGATTTTCAAAAGCAGAAGAAGAATCTGGTGGAGCTGTTGGCTGAAATTAA
CGACATCAACGAGGAGGAGAATTTGATCGAGATCGACATATCGATGGGCTCCATTAAATATTCAAGGTTCGAAATTGAAGCTTAA

mRNA sequence

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Protein sequence

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MSMVYFSISKRNSLPIEKFVEEEEEEKEVTFVSGRKFSSTTGDLLSESECADDNFTTTEESEVEWPFFDRSTAKNPDRSDDGSISDEESLIEIALPTGHYVSHKFDDVDD
DDEEEDEDDNDMSFRLQKLSDFQKQKKNLVELLAEINDINEEENLIEIDISMGSIKYSRFEIEA

Spg000808 (gene) of Sponge gourd (cylindrica) v1 genome