; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg000842 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg000842
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold8:38408477..38415687
RNA-Seq ExpressionSpg000842
SyntenySpg000842
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038891747.1 pescadillo homolog [Benincasa hispida]1.4e-0450.94Show/hide
Query:  LDYWALEIIPKLSEESLGFARRIQSPTPTPNPRIAQWEMFDTLDWSDLDENIF
        L YWA EIIP+LS  ++GFARRI+S      PR+ QWE  +  DW  ++ NIF
Subjt:  LDYWALEIIPKLSEESLGFARRIQSPTPTPNPRIAQWEMFDTLDWSDLDENIF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTCTGCCCGTTCCAGTTTTGTTTCCGTCGTTGTGATGATGGAAATTCGGGGAAAGAATTTTCAATTATCACTGGATTAAATTGTAATCCATTTCCTGTAGAAAA
CATTGATGATGGAGATGCGTTAGATTATTGGGCATTGGAAATCATTCCAAAATTGTCCGAGGAAAGCTTAGGATTTGCTAGAAGAATCCAAAGCCCCACCCCCACCCCCA
ACCCACGGATTGCTCAATGGGAGATGTTCGACACGCTTGATTGGAGTGACTTGGATGAAAATATCTTCTCGACTGAAGATGTAAGTCTCGAAAAACTAGAATTTATAAAT
GCAGCTGAGCAATTTGTAGATGTTGCTGAAAATGTTGTCAATGCAGAAGACCACATTGACAACATTGACAGGATTGTTGATAATGCAACCTCATATGTTGCTACTAGAGA
AAAAGAGATACTGAACCCCGTGCCTAAGTCCCTTCTATCGACCTTCGCGCCGCCCTCGTTCGCGCGGATCTCTCTCTCTCTTTCGCAACTCTCTCTCTCTCGTTGGTCTC
TCTCCTTCTCGAGTCGCCTCGCCCGTCCAGCCGCTGCCGCTGCAACAAGGTGTGTCGCCGCCGCCGCTTCACCGCTGTTCGGATCTGCGGTTTTAGGTTCGTTTCTTGTG
GCATTTCGCCAAGAAGAGAATAAACTCGTGGCCTTTCGGAGTGTCTTGTTCTCGCGTTTTTGCCTCTGTCCAGCAACATTCTTGGGTGTTTCCGGCAATGATTGGCAGTT
CCGGAGTTTATCTGGATCTTTTGAGCGGCTTAAGGAGTTCTTTAGGAGCGTTTGTAAGCTTTTGCACGTTGCTCTGCTTGATTTAAACTATGTTGTTCCAACTGGTGTTA
AGCATGTTGTGTTATTGTTCTTGGGCTATGTTGCATGTGTGTCATGGATGCATAGTCTGTGTGCTCATGCAGAGGTGAGCTGGGTGTGTGTGAGGAGCGTGACGCGGAAA
TCATGTGTTAAGATTGCGATACATGACGCGAAAATCATGTTATTGGTGCGGAGCGTGACGCGTAAATCACGTGAGAGTGTGCGCTGTGCATGGCGCGTAATTCATGTGCT
GGGTGTGAGTGCGTTACATGACGCGGAAATCATGTTTTGGTGCGGAGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTCTGCCCGTTCCAGTTTTGTTTCCGTCGTTGTGATGATGGAAATTCGGGGAAAGAATTTTCAATTATCACTGGATTAAATTGTAATCCATTTCCTGTAGAAAA
CATTGATGATGGAGATGCGTTAGATTATTGGGCATTGGAAATCATTCCAAAATTGTCCGAGGAAAGCTTAGGATTTGCTAGAAGAATCCAAAGCCCCACCCCCACCCCCA
ACCCACGGATTGCTCAATGGGAGATGTTCGACACGCTTGATTGGAGTGACTTGGATGAAAATATCTTCTCGACTGAAGATGTAAGTCTCGAAAAACTAGAATTTATAAAT
GCAGCTGAGCAATTTGTAGATGTTGCTGAAAATGTTGTCAATGCAGAAGACCACATTGACAACATTGACAGGATTGTTGATAATGCAACCTCATATGTTGCTACTAGAGA
AAAAGAGATACTGAACCCCGTGCCTAAGTCCCTTCTATCGACCTTCGCGCCGCCCTCGTTCGCGCGGATCTCTCTCTCTCTTTCGCAACTCTCTCTCTCTCGTTGGTCTC
TCTCCTTCTCGAGTCGCCTCGCCCGTCCAGCCGCTGCCGCTGCAACAAGGTGTGTCGCCGCCGCCGCTTCACCGCTGTTCGGATCTGCGGTTTTAGGTTCGTTTCTTGTG
GCATTTCGCCAAGAAGAGAATAAACTCGTGGCCTTTCGGAGTGTCTTGTTCTCGCGTTTTTGCCTCTGTCCAGCAACATTCTTGGGTGTTTCCGGCAATGATTGGCAGTT
CCGGAGTTTATCTGGATCTTTTGAGCGGCTTAAGGAGTTCTTTAGGAGCGTTTGTAAGCTTTTGCACGTTGCTCTGCTTGATTTAAACTATGTTGTTCCAACTGGTGTTA
AGCATGTTGTGTTATTGTTCTTGGGCTATGTTGCATGTGTGTCATGGATGCATAGTCTGTGTGCTCATGCAGAGGTGAGCTGGGTGTGTGTGAGGAGCGTGACGCGGAAA
TCATGTGTTAAGATTGCGATACATGACGCGAAAATCATGTTATTGGTGCGGAGCGTGACGCGTAAATCACGTGAGAGTGTGCGCTGTGCATGGCGCGTAATTCATGTGCT
GGGTGTGAGTGCGTTACATGACGCGGAAATCATGTTTTGGTGCGGAGCGTGA
Protein sequenceShow/hide protein sequence
MSFCPFQFCFRRCDDGNSGKEFSIITGLNCNPFPVENIDDGDALDYWALEIIPKLSEESLGFARRIQSPTPTPNPRIAQWEMFDTLDWSDLDENIFSTEDVSLEKLEFIN
AAEQFVDVAENVVNAEDHIDNIDRIVDNATSYVATREKEILNPVPKSLLSTFAPPSFARISLSLSQLSLSRWSLSFSSRLARPAAAAATRCVAAAASPLFGSAVLGSFLV
AFRQEENKLVAFRSVLFSRFCLCPATFLGVSGNDWQFRSLSGSFERLKEFFRSVCKLLHVALLDLNYVVPTGVKHVVLLFLGYVACVSWMHSLCAHAEVSWVCVRSVTRK
SCVKIAIHDAKIMLLVRSVTRKSRESVRCAWRVIHVLGVSALHDAEIMFWCGA