CuGenDBv2

Gene ID	Spg000886
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	HTH myb-type domain-containing protein
Genome location	scaffold8:42261786..42265658
RNA-Seq Expression	Spg000886
Synteny	Spg000886
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domains	IPR006447 - Myb domain, plants IPR044848 - PHR1-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604776.1 putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. sororia]

3.3e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

KAG7034901.1 putative Myb family transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.3e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

XP_022947230.1 uncharacterized protein LOC111451155 [Cucurbita moschata]

3.3e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

XP_022970836.1 two-component response regulator ARR10-like [Cucurbita maxima]

3.3e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

XP_023533211.1 uncharacterized protein LOC111795167 [Cucurbita pepo subsp. pepo]

3.3e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBB2 HTH myb-type domain-containing protein

2.0e-23

74.47

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Query:  MINGIDLNEEAKGIEEGFAEENS-----SSNNGSMEE-EKEEEEDQRRS----GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MING DLNEEAKGI+EGF E NS     SSNNGSMEE EKEEE +++RS    G VRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MINGIDLNEEAKGIEEGFAEENS-----SSNNGSMEE-EKEEEEDQRRS----GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

A0A1S3BJ91 probable transcription factor KAN2 isoform X2

1.5e-23

74.47

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Query:  MINGIDLNEEAKGIEEGFAEENS-----SSNNGSMEE-EKEEEEDQRRS----GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MING DLNEEAKG++EGF E NS     SSNNGSMEE EKEEE D++RS    G VRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MINGIDLNEEAKGIEEGFAEENS-----SSNNGSMEE-EKEEEEDQRRS----GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

A0A1S3BK41 uncharacterized protein LOC103490495 isoform X1

1.5e-23

74.47

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Query:  MINGIDLNEEAKGIEEGFAEENS-----SSNNGSMEE-EKEEEEDQRRS----GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MING DLNEEAKG++EGF E NS     SSNNGSMEE EKEEE D++RS    G VRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MINGIDLNEEAKGIEEGFAEENS-----SSNNGSMEE-EKEEEEDQRRS----GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

A0A6J1G6A3 uncharacterized protein LOC111451155

1.6e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

A0A6J1I531 two-component response regulator ARR10-like

1.6e-25

82.35

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Query:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        MMING DLNEEA  I+    EENSSSNNGS+EEEK EEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQE+    L
Subjt:  MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

SwissProt top hits

e value

%identity

Alignment

A0A0P0X0C0 Myb family transcription factor MPH1

4.6e-06

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Query:  GVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEK
        GVR+Y+RS++PR+RWT ++H  FV AVE LGGQ++
Subjt:  GVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEK

A3AWH5 Myb family transcription factor MOF1

6.5e-08

60.47

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Query:  RSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        R+G VR+Y RSK+PRLRWT +LH +FV A+E LGGQ+K    L
Subjt:  RSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

Q700D9 Putative Myb family transcription factor At1g14600

1.4e-07

63.41

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Query:  GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        GGVR Y RS +PRLRWTP+LH +FV+AV+ LGGQ K    L
Subjt:  GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

Arabidopsis top hits

e value

%identity

Alignment

AT1G14600.1 Homeodomain-like superfamily protein

1.0e-08

63.41

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Query:  GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        GGVR Y RS +PRLRWTP+LH +FV+AV+ LGGQ K    L
Subjt:  GGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

AT2G02060.1 Homeodomain-like superfamily protein

1.8e-08

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Query:  GVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        GVR Y RS +PRLRWTPDLH  FV+AVE LGGQ +    L
Subjt:  GVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

AT2G38300.1 myb-like HTH transcriptional regulator family protein

6.4e-11

51.32

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Query:  EEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        EE +  EE   EE+  S+N ++EE  ++ +       VR Y RSK+PRLRWTPDLHL FV AVERLGGQE+    L
Subjt:  EEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

AT2G40260.1 Homeodomain-like superfamily protein

7.1e-10

45.57

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Query:  NEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQ--RRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        +EE +  EE  + + S S+N   EE      DQ  +  G VR Y+RSK PRLRWTP+LH+ F+ AVERLGG ++    L
Subjt:  NEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQ--RRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

AT2G42660.1 Homeodomain-like superfamily protein

5.4e-10

52.31

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Query:  EENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL
        EE    NN   EEE   E++ + +  VR+Y RS MPRLRWTPDLHL+FV AV+RLGG ++    L
Subjt:  EENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNL

Sequences

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CDS sequence

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ATGATGATAAATGGGATTGATCTGAACGAAGAAGCCAAAGGCATTGAGGAGGGATTTGCAGAAGAGAACTCGAGCAGCAACAATGGAAGCATGGAGGAGGAGAAAGAAGA
AGAAGAAGATCAAAGAAGAAGTGGGGGTGTTAGAAAGTATTCAAGGTCCAAAATGCCAAGGCTTCGTTGGACTCCCGATCTTCATCTCGCCTTCGTAAATGCTGTCGAAC
GACTCGGTGGACAAGAAAAACAAATCTCTAATCTCGAGACAAGAAACAAATACTTCAATTATATCGAGGGCAACTCCAAAGTTGGTGCTTCAGTTGATGAATGTAAGAGG
CCTCAGCATTGCCCATGTAAAGAGTCATTTGCAGGTACCCATGCATTTTTATTTTTATTTTTTGAAGTATAA

mRNA sequence

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Protein sequence

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MMINGIDLNEEAKGIEEGFAEENSSSNNGSMEEEKEEEEDQRRSGGVRKYSRSKMPRLRWTPDLHLAFVNAVERLGGQEKQISNLETRNKYFNYIEGNSKVGASVDECKR
PQHCPCKESFAGTHAFLFLFFEV

Spg000886 (gene) of Sponge gourd (cylindrica) v1 genome