CuGenDBv2

Gene ID	Spg000974
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Rab5-interacting
Genome location	scaffold8:44410695..44414584
RNA-Seq Expression	Spg000974
Synteny	Spg000974
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008464121.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

3.5e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_022148492.1 uncharacterized protein C20orf24 homolog [Momordica charantia]

7.0e-65

97.67

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFD EASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFI+FL ISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAWTLVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_022947918.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita moschata]

2.7e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_023532324.1 uncharacterized protein C20orf24 homolog isoform X2 [Cucurbita pepo subsp. pepo]

3.5e-64

94.57

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW L+YSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

XP_038900616.1 respirasome Complex Assembly Factor 1-like [Benincasa hispida]

1.6e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKE+KPVKFNLHQHQ+HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KFE5 Uncharacterized protein

2.2e-64

94.57

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAV+LGLLWGSIPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A1S4E4J0 uncharacterized protein C20orf24 homolog

1.7e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A5D3DK85 Rab5-interacting

1.7e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQ+HQNGHLAPFKLAKL DPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A6J1D489 uncharacterized protein C20orf24 homolog

3.4e-65

97.67

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFD EASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFI+FL ISTSIVYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAWTLVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

A0A6J1G7Y2 uncharacterized protein C20orf24 homolog isoform X2

1.3e-64

95.35

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Query:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG
        MKEA PVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWG+IPLVGGIWF++FLAISTS+VYGYYAMILKVDEEEFGG
Subjt:  MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGG

Query:  HGALLQEGLFASITLFLLAWTLVYSLAHF
        HGALLQEGLFASITLFLLAW LVYSLAHF
Subjt:  HGALLQEGLFASITLFLLAWTLVYSLAHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

2.4e-15

37.84

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +AVVLG++WG +PL G +    F  I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWTLVYSLAH
        +     ++  H
Subjt:  LAWTLVYSLAH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.1e-17

38.39

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Query:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL
        NG L     +K+   +A+W DKD+  DV++W RQ +A+VLG++WG +PL G +    F  I+  ++Y Y++  L++DEEE+GG   L +EG   S  LF+
Subjt:  NGHLAPFKLAKLFDPEASW-DKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLFASITLFL

Query:  LAWTLVYSLAHF
        + W + Y+  H+
Subjt:  LAWTLVYSLAHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

7.5e-49

69.92

Show/hide

Query:  MKEAKPVKFNLHQHQE----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEE
        MKE K  K +  Q Q     HQN HL  F  AKLFD EASWDKDQLGDVLHWIRQ V ++ GLLWG+IPLVGGIW +LFLAIS+ IVYGYYA++LK+DEE
Subjt:  MKEAKPVKFNLHQHQE----HQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEE

Query:  EFGGHGALLQEGLFASITLFLLAWTLVYSLAHF
        +FGGH ALLQ+GLFAS++LFLLAW LVYSL+ F
Subjt:  EFGGHGALLQEGLFASITLFLLAWTLVYSLAHF

AT5G59410.1 Rab5-interacting family protein

6.4e-56

80.77

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Query:  MKEAKPVKFN-LHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFG
        MKE+K  K N L Q + HQN HL+P KLAKLFDP+ASWDKDQLGDVLHWIRQ V ++ GLLWGSIPLVGGIW ILFLAIS+ IVYGYYAMILKVDEE+FG
Subjt:  MKEAKPVKFN-LHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFG

Query:  GHGALLQEGLFASITLFLLAWTLVYSLAHF
        GH ALLQEGLFAS+TLFLLAW LVYSLAHF
Subjt:  GHGALLQEGLFASITLFLLAWTLVYSLAHF

Sequences

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CDS sequence

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ATGAAAGAAGCGAAACCGGTTAAGTTCAATCTTCATCAACATCAAGAGCACCAAAACGGTCACTTGGCCCCGTTCAAGCTCGCCAAATTGTTCGATCCAGAGGCCTCCTG
GGACAAGGACCAACTAGGAGATGTTTTGCACTGGATTCGACAAGCAGTGGCCGTTGTACTCGGACTGCTGTGGGGATCCATACCTTTGGTTGGAGGCATATGGTTTATAC
TTTTCCTTGCGATATCAACCAGCATTGTATACGGATACTATGCAATGATTTTAAAAGTTGATGAAGAAGAATTTGGAGGTCATGGAGCTCTCCTCCAAGAGGGGCTTTTT
GCTTCTATAACTCTCTTTCTGCTTGCTTGGACTCTCGTATACAGCTTGGCACACTTCTGA

mRNA sequence

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Protein sequence

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MKEAKPVKFNLHQHQEHQNGHLAPFKLAKLFDPEASWDKDQLGDVLHWIRQAVAVVLGLLWGSIPLVGGIWFILFLAISTSIVYGYYAMILKVDEEEFGGHGALLQEGLF
ASITLFLLAWTLVYSLAHF

Spg000974 (gene) of Sponge gourd (cylindrica) v1 genome