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Spg001056 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001056
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold8:47933117..47934814
RNA-Seq ExpressionSpg001056
SyntenySpg001056
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]4.9e-0635.35Show/hide
Query:  IKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTADIWRIENGLEYPVVNV--PQSVD-KPRRDGG
        IK  S+    +  +    DG   +  ++V+F+D   L  +  GIHG FSS  A  FH+G  +    + D WR+ENG  YP VN+  P  +  K  R+GG
Subjt:  IKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTADIWRIENGLEYPVVNV--PQSVD-KPRRDGG
XP_031741396.1 general transcription factor IIF subunit 2 isoform X2 [Cucumis sativus]1.3e-0641.76Show/hide
Query:  LVDGAIIINPFHPDKALIKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTADIWRIE
        LV  A+  +P  P + + K   S   D L  N   D +D  + ++V+FQD +LLID+VAGIHG+FS   A  F +GP  P     DIWR+E
Subjt:  LVDGAIIINPFHPDKALIKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTADIWRIE
TrEMBL top hitse value%identityAlignment
A0A6J1D6X4 uncharacterized protein LOC1110181862.4e-0635.35Show/hide
Query:  IKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTADIWRIENGLEYPVVNV--PQSVD-KPRRDGG
        IK  S+    +  +    DG   +  ++V+F+D   L  +  GIHG FSS  A  FH+G  +    + D WR+ENG  YP VN+  P  +  K  R+GG
Subjt:  IKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTADIWRIENGLEYPVVNV--PQSVD-KPRRDGG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCCCTCGACTCAGAAAACCCCCCAAGGATCAAAAGGAAGAGAATGGAAAGAAGCTCCCGTGTGATGCAACACTAGTTGATGGAGCTATTATTATTAACCCCTTCCA
CCCGGATAAGGCCCTGATTAAATGCCATTCCAGTGAGCTTGCTGACCTATTAACTAAAAATCAGGGGTGGGATGGAGAAGACAAGTACAACGTGCAAATCGTCACCTTCC
AAGATGGCTCCTTGCTGATAGATCGAGTGGCCGGAATTCATGGTACCTTTTCATCGACGACAGCTCACGTCTTCCACAGAGGTCCTTTGGATCCTCTCTTTTTCACAGCA
GATATATGGAGGATTGAAAATGGTTTGGAATATCCAGTGGTTAATGTCCCTCAGTCGGTCGATAAGCCCAGGAGAGATGGAGGACAACTGGAAGGCAATAAAGCAGATTT
TGAAATCTCCCGCCTAAGAATTAAAGGAAAAAACAAAGAGGAAGTCGGACCCTCAAAGAGTGCGGATGCTCCAACCCGAAATGAAGCCCAGTCCATATTGGCCCAGCCTG
GAGGGCCCTCAAAGAGTGTGGATGCTCCAGCCCGAAATGAATCCCAATCCATATTGGCCCAACCTGAATTAGAAAATGGAGACTGGATAGTGAAAAGGTCTAAAAAGGGA
AAGAGAAAAGGTGTTTCTTTTGCCAAAGAGGCCCAGATCACCTTGTTTAAACAGGGGGAGGTCCATCACACTCAAAAAATACACAGCTCTCATACGAATGATGAAACGGT
CGAGGTTTGGAATAGAGAGCAAGGCCTCGAATCTAATTTATCTTTCTCGAGCCCGACCAGCTTTGACAGTGAAGGCGGGAAGGATTACAGTATTAGCAGAATGGAAGCCT
CCGATAGTGACATTCCAGAAGGCTATCAGTTATGTTTCTCCACTGATACCGACCAAGATAGAAGCTCAATACCGCAAAGTGTGGAGGAATCGGTTGAGTTGACGGAAGAA
GTGCTTAGTACTAGAAAGGATGAAGAAATTCAACTTCCGAGAGCTTCCCCAGGGCTCCGAACCACCAGAGAAGCTATGCACGAAGAAAACCAAGTGATCTCTCCAAAAGC
TCTAGCTATGATTCCGTCAGAAAATGAAGAGAGAGTAGCAACAGATACAGACAATGGAGAGCTCCTATTAAGTAAAGAGCTAATCCTCACCCTTAGAAGGAATAACTTAT
GCATTAGGCCGATTGTAGGCTCGAGTGCTAAGAAAGACAACTCTATTAAGAAAGGCGCAACAGGGAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCCCTCGACTCAGAAAACCCCCCAAGGATCAAAAGGAAGAGAATGGAAAGAAGCTCCCGTGTGATGCAACACTAGTTGATGGAGCTATTATTATTAACCCCTTCCA
CCCGGATAAGGCCCTGATTAAATGCCATTCCAGTGAGCTTGCTGACCTATTAACTAAAAATCAGGGGTGGGATGGAGAAGACAAGTACAACGTGCAAATCGTCACCTTCC
AAGATGGCTCCTTGCTGATAGATCGAGTGGCCGGAATTCATGGTACCTTTTCATCGACGACAGCTCACGTCTTCCACAGAGGTCCTTTGGATCCTCTCTTTTTCACAGCA
GATATATGGAGGATTGAAAATGGTTTGGAATATCCAGTGGTTAATGTCCCTCAGTCGGTCGATAAGCCCAGGAGAGATGGAGGACAACTGGAAGGCAATAAAGCAGATTT
TGAAATCTCCCGCCTAAGAATTAAAGGAAAAAACAAAGAGGAAGTCGGACCCTCAAAGAGTGCGGATGCTCCAACCCGAAATGAAGCCCAGTCCATATTGGCCCAGCCTG
GAGGGCCCTCAAAGAGTGTGGATGCTCCAGCCCGAAATGAATCCCAATCCATATTGGCCCAACCTGAATTAGAAAATGGAGACTGGATAGTGAAAAGGTCTAAAAAGGGA
AAGAGAAAAGGTGTTTCTTTTGCCAAAGAGGCCCAGATCACCTTGTTTAAACAGGGGGAGGTCCATCACACTCAAAAAATACACAGCTCTCATACGAATGATGAAACGGT
CGAGGTTTGGAATAGAGAGCAAGGCCTCGAATCTAATTTATCTTTCTCGAGCCCGACCAGCTTTGACAGTGAAGGCGGGAAGGATTACAGTATTAGCAGAATGGAAGCCT
CCGATAGTGACATTCCAGAAGGCTATCAGTTATGTTTCTCCACTGATACCGACCAAGATAGAAGCTCAATACCGCAAAGTGTGGAGGAATCGGTTGAGTTGACGGAAGAA
GTGCTTAGTACTAGAAAGGATGAAGAAATTCAACTTCCGAGAGCTTCCCCAGGGCTCCGAACCACCAGAGAAGCTATGCACGAAGAAAACCAAGTGATCTCTCCAAAAGC
TCTAGCTATGATTCCGTCAGAAAATGAAGAGAGAGTAGCAACAGATACAGACAATGGAGAGCTCCTATTAAGTAAAGAGCTAATCCTCACCCTTAGAAGGAATAACTTAT
GCATTAGGCCGATTGTAGGCTCGAGTGCTAAGAAAGACAACTCTATTAAGAAAGGCGCAACAGGGAAGTAA
Protein sequenceShow/hide protein sequence
MIPRLRKPPKDQKEENGKKLPCDATLVDGAIIINPFHPDKALIKCHSSELADLLTKNQGWDGEDKYNVQIVTFQDGSLLIDRVAGIHGTFSSTTAHVFHRGPLDPLFFTA
DIWRIENGLEYPVVNVPQSVDKPRRDGGQLEGNKADFEISRLRIKGKNKEEVGPSKSADAPTRNEAQSILAQPGGPSKSVDAPARNESQSILAQPELENGDWIVKRSKKG
KRKGVSFAKEAQITLFKQGEVHHTQKIHSSHTNDETVEVWNREQGLESNLSFSSPTSFDSEGGKDYSISRMEASDSDIPEGYQLCFSTDTDQDRSSIPQSVEESVELTEE
VLSTRKDEEIQLPRASPGLRTTREAMHEENQVISPKALAMIPSENEERVATDTDNGELLLSKELILTLRRNNLCIRPIVGSSAKKDNSIKKGATGK