; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001058 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001058
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold8:40686438..40687469
RNA-Seq ExpressionSpg001058
SyntenySpg001058
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604878.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]3.0e-16388.05Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK+GT +T +F LHFHQF R+ SS  SI+P+Q+LQESI+AAVESKSY++LPDLFPSL+EAC +PNPF FLST P NFRT VVDEILQSLI LRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQ HLLLSS WLKQR QSKSVASILL MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRANREIRRA++IIELLEKESYNVGFESYE+LV+GCLECHEYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_022140758.1 pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia]2.1e-15686.59Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK GTT   AF L FHQF R+YSS H+ISPSQTLQESIKAAVESK YKKLPDLFPSLR+AC +P+PF FLSTLP NF TQVVDEILQSLI LRPRSRPQ 
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGCVP PQ HLLLSSAWLKQR QSKSVA+ILL MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GC+PDLESYGTLI ASTAVRRT EAVELL EMVVKVKLTPRQGTIINVVAALRANREIRRA++IIELLEKES+NVGFESYELLV+GCL+C EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMT++GFIPYIRVRQKVVEGLA +GE+ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_022947166.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata]1.1e-16288.05Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK+GT +T +F LHFHQF R+ SS  SI+P+Q+LQESI+AAVESKSY+KLPDLFPSL+EAC +PNPF FLST P NFRT VVDEILQSLI LRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQ HLLLSS WLKQR QSKSVASILL MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRANREIRRA++IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_022971046.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima]1.3e-16388.92Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK+GT +T +F LHFHQF R  SS  SI+P+QTLQESIKAAVESKSYKKLPDLFPSL+EAC +PNPF FLST P NFRTQVVDEILQSLI LRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQ HLLLSSAWLKQR QSKSVASILL MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPR+GT+INVVAALRANREIRRA++IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

XP_023533787.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo]9.7e-16287.76Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK+GT +T +F LHFHQF R+ SS  SI+P+Q+LQESI+AAVESKSY+KLPDLFPSL+EAC +PNPF FLST P NFRT VVDEILQSLI LRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQ HLLLSS WLKQR QSKSVASILL MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRAN EIRRA++IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

TrEMBL top hitse value%identityAlignment
A0A0A0LFL3 Uncharacterized protein1.3e-15181.92Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        M IG TKT AF L+FH F  +YSS HSISPSQTLQ+SIKAAVESKSYKKLPDLFPSL+EACH+PN FLFLST P N RTQVVDEILQSLIS+RPRS+ QF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP PQ H LLSSAWLKQR Q+KSVA+IL+ M+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GC+PDLESYGTLI A+TAVRRT +AVELL EMVVKVKL PRQGTI NVVAALR NRE+RRA++IIELLE++S++VGFESYELLV+GCLEC EYILAGKV 
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMT++GFIPYI+VRQ+VVEGLAGIGE+ELASAVRRRF EL S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A5D3D4C7 Pentatricopeptide repeat-containing protein2.0e-14981.92Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        M IG TKT AF L+FH F  + SS HSISPSQTLQ+SIKAAVESKSYKKLP LFPSL+EACH+PN FLFLST P N RTQVVDEILQSLI +RPRS+ QF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VH SLLFYTLQSPSP PLSLPVLQRILHSGCVP PQ H LLSSAWLKQR Q+KSVA+IL+ M+SIGY+PDS+ICNYLISSLC+I ELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLI A+TAVRRT +AVELL EMVVKVKL PRQ TIINVVAALRANRE+RRA++IIELLE++S++VGFESYELLV+GCLEC EYILAGKVI
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        M MT++GFIPYI+VRQKVVEGL GIGELELASAVRRRF EL S
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A6J1CIR0 pentatricopeptide repeat-containing protein At1g062701.0e-15686.59Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK GTT   AF L FHQF R+YSS H+ISPSQTLQESIKAAVESK YKKLPDLFPSLR+AC +P+PF FLSTLP NF TQVVDEILQSLI LRPRSRPQ 
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        V+ASLLFYTLQSPSPLPLSL VLQRILHSGCVP PQ HLLLSSAWLKQR QSKSVA+ILL MRSIGYEPDSSICNYLISSLCAIDELAEA QVLK MG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GC+PDLESYGTLI ASTAVRRT EAVELL EMVVKVKLTPRQGTIINVVAALRANREIRRA++IIELLEKES+NVGFESYELLV+GCL+C EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMT++GFIPYIRVRQKVVEGLA +GE+ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A6J1G5M7 pentatricopeptide repeat-containing protein At1g062705.5e-16388.05Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK+GT +T +F LHFHQF R+ SS  SI+P+Q+LQESI+AAVESKSY+KLPDLFPSL+EAC +PNPF FLST P NFRT VVDEILQSLI LRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQ HLLLSS WLKQR QSKSVASILL MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPRQGT+INVVAALRANREIRRA++IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

A0A6J1I5P5 pentatricopeptide repeat-containing protein At1g062706.5e-16488.92Show/hide
Query:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF
        MK+GT +T +F LHFHQF R  SS  SI+P+QTLQESIKAAVESKSYKKLPDLFPSL+EAC +PNPF FLST P NFRTQVVDEILQSLI LRPRSRPQF
Subjt:  MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQF

Query:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA
        VHASLLFYTLQSPSPLPLSLPVLQRILHSGC PVPQ HLLLSSAWLKQR QSKSVASILL MRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMG A
Subjt:  VHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRA

Query:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI
        GCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTPR+GT+INVVAALRANREIRRA++IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Subjt:  GCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI

Query:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Subjt:  MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

SwissProt top hitse value%identityAlignment
O49436 Pentatricopeptide repeat-containing protein At4g200903.6e-1027.54Show/hide
Query:  CVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN
        C+P    +  L     K+    ++V  +L  M+S G  P   I N LI  LC   +L    +++  M   GCVP+  +Y TLI       +  +AV LL 
Subjt:  CVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN

Query:  EMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL
        E +V  K  P   T   ++  L   R    A++++  +E+  Y++    Y +L+ G  +  +   A  +   M EKG  P I V   +V+GL   G+   
Subjt:  EMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL

Query:  ASAVRRR
        A  +  R
Subjt:  ASAVRRR

Q0WVK7 Pentatricopeptide repeat-containing protein At1g05670, mitochondrial4.0e-0930.49Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII
        G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A ELL+EM  K+ L P   T  ++V  L  +  I  A++++
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE
           E    N    +Y  L+D   +  E   A +++  M  KG  P I     ++ G    G LE
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE

Q940A6 Pentatricopeptide repeat-containing protein At4g19440, chloroplastic2.0e-0827.65Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII
        G+  D+   N L+  LC   +L EAF++ K +   GCV D  SY TLIS     ++  EA   L+EM VK  L P   T   ++  L    ++  AIQ  
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVR
        +  ++        +Y +++DGC +        +    M  K   P   V   ++      G L +A  +R
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVR

Q9LFF1 Pentatricopeptide repeat-containing protein At3g53700, chloroplastic2.9e-1223.6Show/hide
Query:  FFRKYSSSHSISPSQ-TLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRS-RPQFVHASLLFYTLQSPSP
        F ++ S+     P Q T    +    ++   K   ++   + +  + P+ + + S +    +   V E ++ L  +  R   P  V  + L  TL   + 
Subjt:  FFRKYSSSHSISPSQ-TLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRS-RPQFVHASLLFYTLQSPSP

Query:  LPLSLPVLQRILHSGCVP-VPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS
        +  +  + + +   G +P V   + L+    L + H  +    +   MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI 
Subjt:  LPLSLPVLQRILHSGCVP-VPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS

Query:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV
              +T EA E+ +EM V   ++    T   ++  L  +R +  A Q+++ +  E       +Y  L+       +   A  ++  MT  G  P I  
Subjt:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV

Query:  RQKVVEGLAGIGELELASAVRR
           ++ GL   G +E+AS + R
Subjt:  RQKVVEGLAGIGELELASAVRR

Q9LNC0 Pentatricopeptide repeat-containing protein At1g062702.9e-9253.24Show/hide
Query:  KTCAFSLHFH---QFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQFVHA
        K  A+S  F     FFR      SIS  + ++++IK AVE+K Y ++P+L  SL+E   +   F FLS    + R +V+DEILQS + +RPRS P+ V++
Subjt:  KTCAFSLHFH---QFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQFVHA

Query:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV
        SLL Y LQS  PLPLS  +LQR L SGC+P PQ HLLLS AWL++R  S+SVA I+  M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+
Subjt:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV

Query:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM
        PD+ESYG +I++    R+T + V+++ EMV K  ++PR+G +  V AALRANREI +AI++IE +E   Y V FESYE++V+GCLE  EYILAGKV+M M
Subjt:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM

Query:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        T++GFIPYI+VRQKVVE L  IGE +LA  VR+R +ELRS
Subjt:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

Arabidopsis top hitse value%identityAlignment
AT1G05670.1 Pentatricopeptide repeat (PPR-like) superfamily protein2.8e-1030.49Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII
        G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A ELL+EM  K+ L P   T  ++V  L  +  I  A++++
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE
           E    N    +Y  L+D   +  E   A +++  M  KG  P I     ++ G    G LE
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE

AT1G05670.2 Pentatricopeptide repeat (PPR-like) superfamily protein2.8e-1030.49Show/hide
Query:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII
        G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A ELL+EM  K+ L P   T  ++V  L  +  I  A++++
Subjt:  GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQII

Query:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE
           E    N    +Y  L+D   +  E   A +++  M  KG  P I     ++ G    G LE
Subjt:  ELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE

AT1G06270.1 Pentatricopeptide repeat (PPR) superfamily protein2.0e-9353.24Show/hide
Query:  KTCAFSLHFH---QFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQFVHA
        K  A+S  F     FFR      SIS  + ++++IK AVE+K Y ++P+L  SL+E   +   F FLS    + R +V+DEILQS + +RPRS P+ V++
Subjt:  KTCAFSLHFH---QFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQFVHA

Query:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV
        SLL Y LQS  PLPLS  +LQR L SGC+P PQ HLLLS AWL++R  S+SVA I+  M+ IGY PD+  CNYL+SSLCA+D+L EA +V++ M  AGC+
Subjt:  SLLFYTLQSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCV

Query:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM
        PD+ESYG +I++    R+T + V+++ EMV K  ++PR+G +  V AALRANREI +AI++IE +E   Y V FESYE++V+GCLE  EYILAGKV+M M
Subjt:  PDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM

Query:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
        T++GFIPYI+VRQKVVE L  IGE +LA  VR+R +ELRS
Subjt:  TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS

AT3G53700.1 Pentatricopeptide repeat (PPR) superfamily protein2.1e-1323.6Show/hide
Query:  FFRKYSSSHSISPSQ-TLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRS-RPQFVHASLLFYTLQSPSP
        F ++ S+     P Q T    +    ++   K   ++   + +  + P+ + + S +    +   V E ++ L  +  R   P  V  + L  TL   + 
Subjt:  FFRKYSSSHSISPSQ-TLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRS-RPQFVHASLLFYTLQSPSP

Query:  LPLSLPVLQRILHSGCVP-VPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS
        +  +  + + +   G +P V   + L+    L + H  +    +   MRS G EPD    N LI SLC+  +L EA  +LK M  +GC   + +Y TLI 
Subjt:  LPLSLPVLQRILHSGCVP-VPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLIS

Query:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV
              +T EA E+ +EM V   ++    T   ++  L  +R +  A Q+++ +  E       +Y  L+       +   A  ++  MT  G  P I  
Subjt:  ASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV

Query:  RQKVVEGLAGIGELELASAVRR
           ++ GL   G +E+AS + R
Subjt:  RQKVVEGLAGIGELELASAVRR

AT4G20090.1 Pentatricopeptide repeat (PPR) superfamily protein2.6e-1127.54Show/hide
Query:  CVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN
        C+P    +  L     K+    ++V  +L  M+S G  P   I N LI  LC   +L    +++  M   GCVP+  +Y TLI       +  +AV LL 
Subjt:  CVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLN

Query:  EMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL
        E +V  K  P   T   ++  L   R    A++++  +E+  Y++    Y +L+ G  +  +   A  +   M EKG  P I V   +V+GL   G+   
Subjt:  EMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL

Query:  ASAVRRR
        A  +  R
Subjt:  ASAVRRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGAAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAG
TATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTTGTTTCTCTCTACCTTGC
CTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCGTTAATCTCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCTTCGCTGCTTTTCTACACTCTT
CAAAGCCCTTCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGTTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAA
ACAACGTCACCAGTCTAAGTCTGTTGCTAGTATCTTGTTGGGCATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGA
CGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGA
GATAAGGAGAGCAATTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATA
TTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTT
GCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGAAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAG
TATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTTGTTTCTCTCTACCTTGC
CTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCGTTAATCTCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCTTCGCTGCTTTTCTACACTCTT
CAAAGCCCTTCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGTTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAA
ACAACGTCACCAGTCTAAGTCTGTTGCTAGTATCTTGTTGGGCATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCA
TTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGA
CGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGA
GATAAGGAGAGCAATTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATA
TTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTT
GCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA
Protein sequenceShow/hide protein sequence
MKIGTTKTCAFSLHFHQFFRKYSSSHSISPSQTLQESIKAAVESKSYKKLPDLFPSLREACHSPNPFLFLSTLPDNFRTQVVDEILQSLISLRPRSRPQFVHASLLFYTL
QSPSPLPLSLPVLQRILHSGCVPVPQIHLLLSSAWLKQRHQSKSVASILLGMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVR
RTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAIQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELEL
ASAVRRRFAELRS