; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001062 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001062
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold8:41316153..41316821
RNA-Seq ExpressionSpg001062
SyntenySpg001062
Gene Ontology termsNA
InterPro domainsIPR006566 - FBD domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054394.1 RNI-like/FBD-like domain protein [Cucumis melo var. makuwa]8.2e-6678.4Show/hide
Query:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG
        ++SS  YFA Y PP NNV  LEL T  RK NGPGLANIFR C +LHTLTIKIVDG NIGRKDWRRDKWER  SEEEQFWETQIEPLKSFLLHLKIV+IEG
Subjt:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG

Query:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
        FM+CL+EVSLTQFLLKHG+ALQQLT+ T+KT HRDS +RRREIK+QIM F RASS VK+ YC
Subjt:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
XP_004140045.1 putative F-box/FBD/LRR-repeat protein At4g03220 [Cucumis sativus]2.2e-6677.25Show/hide
Query:  SIFWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKI
        S+   ++SS  YFA Y PP NNV  LEL T FRK NGPGLANIFR C +LHTLTIKIVDG NIGRKDWRRDKWER  SEEEQFWETQIEPL+SFLLHLKI
Subjt:  SIFWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKI

Query:  VRIEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSL-RRREIKAQIMGFSRASSDVKIQYC
        V+IEGFM+CL+EVSLT+FLLKHG+ALQQLT+ T+KT HRDSL RRREIK+QIM F RASS VK+QYC
Subjt:  VRIEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSL-RRREIKAQIMGFSRASSDVKIQYC
XP_008456455.1 PREDICTED: putative F-box/FBD/LRR-repeat protein At4g03220 [Cucumis melo]8.2e-6678.4Show/hide
Query:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG
        ++SS  YFA Y PP NNV  LEL T  RK NGPGLANIFR C +LHTLTIKIVDG NIGRKDWRRDKWER  SEEEQFWETQIEPLKSFLLHLKIV+IEG
Subjt:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG

Query:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
        FM+CL+EVSLTQFLLKHG+ALQQLT+ T+KT HRDS +RRREIK+QIM F RASS VK+ YC
Subjt:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
XP_022970991.1 putative F-box/FBD/LRR-repeat protein At4g03220 [Cucurbita maxima]4.1e-6575Show/hide
Query:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR
        F  VLSSNNYFACYLP FNNV+ LEL+TV +KHN   +ANIFR CP+LHTLTIKIVD  + GRKDWR++KWE+IVSEEE FWETQIEPL+SF LHLKIVR
Subjt:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR

Query:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
        +EGFMEC NEVSLT FLLK+GT+LQ+L+I T+KTNHRDSL+RR IK+ IMGFSRAS  VK++YC
Subjt:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
XP_023534041.1 putative F-box/FBD/LRR-repeat protein At4g03220 [Cucurbita pepo subsp. pepo]1.8e-6576.22Show/hide
Query:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR
        F  +LSSN YFACYLP FNNV+ LEL+TV RKHN   +ANIFR CPILHTLTIKIVD S+ GRKDWR++KWE IVSEEE FWETQIEPL+SF LHLKIVR
Subjt:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR

Query:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
        +EGFMECLNEVSLT FLLK+GT+LQ+L+I T+KTNHRDSL+RR IK+ IMGFSRAS  VK++YC
Subjt:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
TrEMBL top hitse value%identityAlignment
A0A0A0KAF3 FBD domain-containing protein1.0e-6677.25Show/hide
Query:  SIFWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKI
        S+   ++SS  YFA Y PP NNV  LEL T FRK NGPGLANIFR C +LHTLTIKIVDG NIGRKDWRRDKWER  SEEEQFWETQIEPL+SFLLHLKI
Subjt:  SIFWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKI

Query:  VRIEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSL-RRREIKAQIMGFSRASSDVKIQYC
        V+IEGFM+CL+EVSLT+FLLKHG+ALQQLT+ T+KT HRDSL RRREIK+QIM F RASS VK+QYC
Subjt:  VRIEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSL-RRREIKAQIMGFSRASSDVKIQYC
A0A1S3C2V5 putative F-box/FBD/LRR-repeat protein At4g032204.0e-6678.4Show/hide
Query:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG
        ++SS  YFA Y PP NNV  LEL T  RK NGPGLANIFR C +LHTLTIKIVDG NIGRKDWRRDKWER  SEEEQFWETQIEPLKSFLLHLKIV+IEG
Subjt:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG

Query:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
        FM+CL+EVSLTQFLLKHG+ALQQLT+ T+KT HRDS +RRREIK+QIM F RASS VK+ YC
Subjt:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
A0A5D3BAE4 RNI-like/FBD-like domain protein4.0e-6678.4Show/hide
Query:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG
        ++SS  YFA Y PP NNV  LEL T  RK NGPGLANIFR C +LHTLTIKIVDG NIGRKDWRRDKWER  SEEEQFWETQIEPLKSFLLHLKIV+IEG
Subjt:  VLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEG

Query:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
        FM+CL+EVSLTQFLLKHG+ALQQLT+ T+KT HRDS +RRREIK+QIM F RASS VK+ YC
Subjt:  FMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDS-LRRREIKAQIMGFSRASSDVKIQYC
A0A6J1G8I1 putative F-box/FBD/LRR-repeat protein At4g032202.6e-6575.61Show/hide
Query:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR
        F  +LSSN YFACYLP FNNV+ LEL+TV RKHN   +ANIFR CPILH LTIKIVD S+ GRKDWR++KWERIVSEEE FWETQIEPL+SF LHLKIVR
Subjt:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR

Query:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
        +EGFMEC NEVSLT FLLK+GT+LQ+L+I T+KTNHRDSL+RR IK+ IMGFSRAS  VK++YC
Subjt:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
A0A6J1I231 putative F-box/FBD/LRR-repeat protein At4g032202.0e-6575Show/hide
Query:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR
        F  VLSSNNYFACYLP FNNV+ LEL+TV +KHN   +ANIFR CP+LHTLTIKIVD  + GRKDWR++KWE+IVSEEE FWETQIEPL+SF LHLKIVR
Subjt:  FWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVR

Query:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
        +EGFMEC NEVSLT FLLK+GT+LQ+L+I T+KTNHRDSL+RR IK+ IMGFSRAS  VK++YC
Subjt:  IEGFMECLNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC
SwissProt top hitse value%identityAlignment
Q9ZR09 Putative F-box/FBD/LRR-repeat protein At4g032202.1e-3247.33Show/hide
Query:  YLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEGFMECLNEVSL
        +L PF+N++ LELQT   +HN   L+ +F+ CP+L+ LT+KI+D     R+ W +D W+ + + E Q+WE+Q   L+SFL HL+ V I GF+EC NE+SL
Subjt:  YLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEGFMECLNEVSL

Query:  TQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQY
          FLL+HG AL ++T+ +S    RDSLRR+ I++Q+ GFS ASS  KI +
Subjt:  TQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQY
Arabidopsis top hitse value%identityAlignment
AT4G03220.1 Protein with RNI-like/FBD-like domains1.5e-3347.33Show/hide
Query:  YLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEGFMECLNEVSL
        +L PF+N++ LELQT   +HN   L+ +F+ CP+L+ LT+KI+D     R+ W +D W+ + + E Q+WE+Q   L+SFL HL+ V I GF+EC NE+SL
Subjt:  YLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEGFMECLNEVSL

Query:  TQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQY
          FLL+HG AL ++T+ +S    RDSLRR+ I++Q+ GFS ASS  KI +
Subjt:  TQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQY

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAATTTTTTGGCAGGTTCTATCGAGCAATAATTACTTTGCATGTTATTTGCCACCCTTCAACAACGTAAAATCTTTGGAATTGCAAACAGTTTTCAGAAAGCACAA
TGGTCCAGGGTTAGCGAATATATTCAGATGCTGTCCCATTCTTCATACTCTCACAATCAAAATCGTGGACGGTAGCAACATTGGAAGGAAGGATTGGCGTAGAGATAAGT
GGGAAAGGATTGTGTCAGAGGAAGAACAGTTCTGGGAAACTCAAATCGAGCCTCTCAAATCCTTTCTTCTTCATCTCAAGATTGTGAGAATCGAAGGGTTCATGGAGTGC
TTGAATGAAGTTAGCCTCACTCAGTTCTTGCTCAAGCACGGGACTGCACTGCAACAACTCACCATTTCCACAAGCAAAACCAACCATAGAGATTCCCTTAGACGACGAGA
AATTAAGGCTCAAATCATGGGATTCTCTCGGGCTTCTTCTGATGTCAAAATTCAATATTGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAATTTTTTGGCAGGTTCTATCGAGCAATAATTACTTTGCATGTTATTTGCCACCCTTCAACAACGTAAAATCTTTGGAATTGCAAACAGTTTTCAGAAAGCACAA
TGGTCCAGGGTTAGCGAATATATTCAGATGCTGTCCCATTCTTCATACTCTCACAATCAAAATCGTGGACGGTAGCAACATTGGAAGGAAGGATTGGCGTAGAGATAAGT
GGGAAAGGATTGTGTCAGAGGAAGAACAGTTCTGGGAAACTCAAATCGAGCCTCTCAAATCCTTTCTTCTTCATCTCAAGATTGTGAGAATCGAAGGGTTCATGGAGTGC
TTGAATGAAGTTAGCCTCACTCAGTTCTTGCTCAAGCACGGGACTGCACTGCAACAACTCACCATTTCCACAAGCAAAACCAACCATAGAGATTCCCTTAGACGACGAGA
AATTAAGGCTCAAATCATGGGATTCTCTCGGGCTTCTTCTGATGTCAAAATTCAATATTGTTGA
Protein sequenceShow/hide protein sequence
MSIFWQVLSSNNYFACYLPPFNNVKSLELQTVFRKHNGPGLANIFRCCPILHTLTIKIVDGSNIGRKDWRRDKWERIVSEEEQFWETQIEPLKSFLLHLKIVRIEGFMEC
LNEVSLTQFLLKHGTALQQLTISTSKTNHRDSLRRREIKAQIMGFSRASSDVKIQYC