; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001073 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001073
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUBA domain-containing protein
Genome locationscaffold8:40161164..40170427
RNA-Seq ExpressionSpg001073
SyntenySpg001073
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033311.1 chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]2.4e-3790.74Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DTGDHKKV
           +HKKV
Subjt:  DTGDHKKV

TYK21595.1 chromatin assembly factor 1 subunit A [Cucumis melo var. makuwa]2.4e-3790.74Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DTGDHKKV
           +HKKV
Subjt:  DTGDHKKV

XP_004138965.1 chromatin assembly factor 1 subunit A-B [Cucumis sativus]1.2e-3687.5Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DT--GDHKKVNR
             D  KV R
Subjt:  DT--GDHKKVNR

XP_008457228.1 PREDICTED: chromatin assembly factor 1 subunit A [Cucumis melo]1.6e-3687.5Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DT--GDHKKVNR
             D  KV R
Subjt:  DT--GDHKKVNR

XP_034197110.1 UBX domain-containing protein 1-B isoform X2 [Prunus dulcis]1.4e-3777.69Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIR+GKELLEAKR+EEENERKRI+ALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKPA PVVEEK  SLP+RPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DTGDHKKVNRRRTVHFVSVCE
             +  + +  + F+ +CE
Subjt:  DTGDHKKVNRRRTVHFVSVCE

TrEMBL top hitse value%identityAlignment
A0A0A0LL71 UBA domain-containing protein5.8e-3787.5Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DT--GDHKKVNR
             D  KV R
Subjt:  DT--GDHKKVNR

A0A1S3C4L3 chromatin assembly factor 1 subunit A7.5e-3787.5Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DT--GDHKKVNR
             D  KV R
Subjt:  DT--GDHKKVNR

A0A5A7SV28 Chromatin assembly factor 1 subunit A1.2e-3790.74Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DTGDHKKV
           +HKKV
Subjt:  DTGDHKKV

A0A5D3DDJ0 Chromatin assembly factor 1 subunit A1.2e-3790.74Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKP  PVVEEK +SLPVRPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DTGDHKKV
           +HKKV
Subjt:  DTGDHKKV

A0A6J5TG66 UBA domain-containing protein1.3e-3683.04Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK
        ERIR+GKELLEAKR+EEENERKRI+ALRKAEKEEEKRAREKIRQKLEEDKAE RRRLGLPPEDPSTAKPA PVVEEK  SLP+RPA KAEQMRECLRSLK
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRSLK

Query:  DTGDHKKVNRRR
                N +R
Subjt:  DTGDHKKVNRRR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04850.1 ubiquitin-associated (UBA)/TS-N domain-containing protein1.1e-3577.19Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPST--AKPATPVVEEKLISLPVRPALKAEQMRECLRS
        ERIRIGKELLEAKR+EE NERKR++ LRKAEKEEEKRAREKIRQKLEEDKAE RR+LGLPPEDP+T  AKP+ PVVEEK ++LP+RPA K EQMRECLRS
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPST--AKPATPVVEEKLISLPVRPALKAEQMRECLRS

Query:  LKDT--GDHKKVNR
        LK     D  KV R
Subjt:  LKDT--GDHKKVNR

AT5G48690.1 CONTAINS InterPro DOMAIN/s: Ubiquitin-associated/translation elongation factor EF1B, N-terminal, eukaryote (InterPro:IPR015940), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567), UBA-like (InterPro:IPR009060)4.8e-2055.65Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLP--PEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRS
        ERIR GKEL+E KRI EENERKR +ALRKAEK+EEK+AREKI  K+  DK E +RRLGLP   E  ST+ P +P+  ++++        KAE+MRECLRS
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLP--PEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRS

Query:  LKDTGDHKKVNRRRT
        L+   +HK  + R T
Subjt:  LKDTGDHKKVNRRRT

AT5G48690.2 FUNCTIONS IN: molecular_function unknown4.8e-2055.65Show/hide
Query:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLP--PEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRS
        ERIR GKEL+E KRI EENERKR +ALRKAEK+EEK+AREKI  K+  DK E +RRLGLP   E  ST+ P +P+  ++++        KAE+MRECLRS
Subjt:  ERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLP--PEDPSTAKPATPVVEEKLISLPVRPALKAEQMRECLRS

Query:  LKDTGDHKKVNRRRT
        L+   +HK  + R T
Subjt:  LKDTGDHKKVNRRRT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGACGCAAAATGGAAGAGTCTTGAAGGTTTAGGTCTATATTATGAGTTCTATAAATCTGTTGTCACCCCGATCGGTGAGAGAATCCGAATTGGCAAGGAGCT
CCTAGAAGCAAAAAGGATCGAGGAAGAAAATGAGAGAAAAAGAATATTAGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCCAGAGAAAAAATTCGTCAAAAAC
TTGAAGAGGACAAGGCAGAAAGCAGACGGAGGCTTGGATTGCCACCAGAAGATCCTTCGACTGCAAAACCTGCAACACCTGTTGTTGAAGAGAAACTGATCTCATTGCCG
GTTAGACCTGCTTTAAAGGCAGAGCAAATGAGAGAATGCTTGCGATCTTTAAAGGACACCGGAGATCACAAGAAGGTTAATCGTCGCCGGACAGTCCATTTTGTAAGTGT
CTGCGAATCGTTCAATGCTGGGGACGGTGTCTTTGAGCGTCGAGGCCAAGGTTTTGAAATGTGCTATGAGTTTGAAGCATTCGGTTTCGTAATCGGAAGAAGGGGATTAT
GTCGCGGATGTGCAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAATCAAGCAGAAATAGGGCTGGAGGATGGACCCCAGAGGCGAAACAGGCCAATGGGT
CAGGCCAAGACTGAAGGGGTCGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCTTGGGCGGCCGAGGCCGAGCTCGTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAAGACGCAAAATGGAAGAGTCTTGAAGGTTTAGGTCTATATTATGAGTTCTATAAATCTGTTGTCACCCCGATCGGTGAGAGAATCCGAATTGGCAAGGAGCT
CCTAGAAGCAAAAAGGATCGAGGAAGAAAATGAGAGAAAAAGAATATTAGCCTTGAGGAAAGCTGAAAAAGAAGAAGAGAAAAGAGCCAGAGAAAAAATTCGTCAAAAAC
TTGAAGAGGACAAGGCAGAAAGCAGACGGAGGCTTGGATTGCCACCAGAAGATCCTTCGACTGCAAAACCTGCAACACCTGTTGTTGAAGAGAAACTGATCTCATTGCCG
GTTAGACCTGCTTTAAAGGCAGAGCAAATGAGAGAATGCTTGCGATCTTTAAAGGACACCGGAGATCACAAGAAGGTTAATCGTCGCCGGACAGTCCATTTTGTAAGTGT
CTGCGAATCGTTCAATGCTGGGGACGGTGTCTTTGAGCGTCGAGGCCAAGGTTTTGAAATGTGCTATGAGTTTGAAGCATTCGGTTTCGTAATCGGAAGAAGGGGATTAT
GTCGCGGATGTGCAATTTTGGACCACCCCGATGTACAAGGAGCTGACGAGGACAATCAAGCAGAAATAGGGCTGGAGGATGGACCCCAGAGGCGAAACAGGCCAATGGGT
CAGGCCAAGACTGAAGGGGTCGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCTTGGGCGGCCGAGGCCGAGCTCGTCTAG
Protein sequenceShow/hide protein sequence
MEEDAKWKSLEGLGLYYEFYKSVVTPIGERIRIGKELLEAKRIEEENERKRILALRKAEKEEEKRAREKIRQKLEEDKAESRRRLGLPPEDPSTAKPATPVVEEKLISLP
VRPALKAEQMRECLRSLKDTGDHKKVNRRRTVHFVSVCESFNAGDGVFERRGQGFEMCYEFEAFGFVIGRRGLCRGCAILDHPDVQGADEDNQAEIGLEDGPQRRNRPMG
QAKTEGVGLLARPPARPRPWAAEAELV