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Spg001087 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001087
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold8:38525543..38526679
RNA-Seq ExpressionSpg001087
SyntenySpg001087
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039309.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.5e-0935.25Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI
        IG + GG ++ AEE  +  + +EAK+KIR NY GF+PA V I  +EGN+ F VQ+VT+ +G  L+ R   +HG+F  + A +F       +F+P     +
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI

Query:  EDGTNYPTVNIQKILDGTIGSV
         DG    + ++   + G+  S+
Subjt:  EDGTNYPTVNIQKILDGTIGSV

KAA0046763.1 hypothetical protein E6C27_scaffold216G00460 [Cucumis melo var. makuwa]1.2e-0943.96Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPE
        IG + GG ++ AEE  S  + +EAKIKIR NY GF+PA V I   +GN+ F++Q+VT+ +G  L  R   +HG+F  + A AF +   D E
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPE

KAA0063660.1 hypothetical protein E6C27_scaffold329G001750 [Cucumis melo var. makuwa]1.2e-0935.25Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI
        IG + GG ++ AEE  +  + +EAK+KIR NY GF+PA V I  +EGN+ F +Q +T+ +G  L+ R   +HG+F  + A +F       EF+P     +
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI

Query:  EDGTNYPTVNIQKILDGTIGSV
         DG    + ++Q    G+  S+
Subjt:  EDGTNYPTVNIQKILDGTIGSV

TYK00493.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]1.5e-0935.25Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI
        IG + GG ++ AEE  +  + +EAK+KIR NY GF+PA V I  +EGN+ F VQ+VT+ +G  L+ R   +HG+F  + A +F       +F+P     +
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI

Query:  EDGTNYPTVNIQKILDGTIGSV
         DG    + ++   + G+  S+
Subjt:  EDGTNYPTVNIQKILDGTIGSV

XP_022149859.1 uncharacterized protein LOC111018186 [Momordica charantia]1.1e-2345.95Show/hide
Query:  AIGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCIREGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRIE
        AIG++LGGF++Y + NS  I+C +  IK+++NYCGFIPA +   +G   F  ++V+++D   L  +  GIHG FSSE A +FH+G A+   +    WR+E
Subjt:  AIGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCIREGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRIE

Query:  DGTNYPTVNIQ
        +G NYP VNIQ
Subjt:  DGTNYPTVNIQ

TrEMBL top hitse value%identityAlignment
A0A5A7TDG1 LINE-1 retrotransposable element ORF2 protein7.3e-1035.25Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI
        IG + GG ++ AEE  +  + +EAK+KIR NY GF+PA V I  +EGN+ F VQ+VT+ +G  L+ R   +HG+F  + A +F       +F+P     +
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI

Query:  EDGTNYPTVNIQKILDGTIGSV
         DG    + ++   + G+  S+
Subjt:  EDGTNYPTVNIQKILDGTIGSV

A0A5A7TT76 Uncharacterized protein5.6e-1043.96Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPE
        IG + GG ++ AEE  S  + +EAKIKIR NY GF+PA V I   +GN+ F++Q+VT+ +G  L  R   +HG+F  + A AF +   D E
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPE

A0A5A7V8Z8 Uncharacterized protein5.6e-1035.25Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI
        IG + GG ++ AEE  +  + +EAK+KIR NY GF+PA V I  +EGN+ F +Q +T+ +G  L+ R   +HG+F  + A +F       EF+P     +
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI

Query:  EDGTNYPTVNIQKILDGTIGSV
         DG    + ++Q    G+  S+
Subjt:  EDGTNYPTVNIQKILDGTIGSV

A0A5D3BL61 LINE-1 retrotransposable element ORF2 protein7.3e-1035.25Show/hide
Query:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI
        IG + GG ++ AEE  +  + +EAK+KIR NY GF+PA V I  +EGN+ F VQ+VT+ +G  L+ R   +HG+F  + A +F       +F+P     +
Subjt:  IGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCI--REGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRI

Query:  EDGTNYPTVNIQKILDGTIGSV
         DG    + ++   + G+  S+
Subjt:  EDGTNYPTVNIQKILDGTIGSV

A0A6J1D6X4 uncharacterized protein LOC1110181865.2e-2445.95Show/hide
Query:  AIGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCIREGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRIE
        AIG++LGGF++Y + NS  I+C +  IK+++NYCGFIPA +   +G   F  ++V+++D   L  +  GIHG FSSE A +FH+G A+   +    WR+E
Subjt:  AIGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCIREGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRIE

Query:  DGTNYPTVNIQ
        +G NYP VNIQ
Subjt:  DGTNYPTVNIQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCATTGGAGATAGCCTGGGAGGATTTGTTGAATATGCTGAAGAAAACTCCTCCCTCATTGACTGTGTGGAAGCAAAAATCAAGATCAGGAATAACTATTGTGGATT
TATCCCAGCGGCCGTGTGTATCAGAGAAGGGAACGAATCTTTTAACGTGCAGATTGTCACATATCAAGATGGGGATATGCTCGTGAATAGGGTCGCCGGAATCCATGGTA
GCTTCTCGTCGGAGATGGCCCACGCCTTCCACAAGGGACCTGCAGACCCGGAGTTTAGTCCCACGGGCATTTGGAGGATAGAAGATGGCACGAATTATCCGACGGTTAAT
ATCCAAAAGATATTAGATGGTACTATCGGTTCAGTGGGACAGCTGGAAAGCAATGAAGAAAGATTTGAATTATCCCGCCAAAAAAGGCCTGTGGGGGCAAGTGACCTTGG
GTTAGACTCAGATTTTTCTTTCTCCAGTCCGACAAGTAAAGATCCCGAAGAAGAAGATTATGTCGACGGCGGAATGCTTGAAGAATCTGAAGCCCAGATGGCCATGGAAG
ATTATCGTAACGAATTGATAGATGACGAGGATAATTTGGTGAATTTCCAATCTGCGAGCCTATTAGATTCTCAGAGCATTCCTCAGACTTCGAGCGTTATTCCAGAGAGC
TTGAAGATCTGCGATACTAAGGGAGACCAAATGCCTGAAACTAACGCTTTAGTTATTGATGGTCCGAAGGCTATAGCTGTTATCTCTCCTCATTGTGATCAGGGTAGTGA
CAGCAAAAATCCATTCATAGAAGGCTTCTCTATCAGCAGAGACATTGTTCTCACCTTACGGAAAAACAACCTGTGTATTAGACCCATAGCTAGTGCCAAAAAGGGAAATA
CCACGCAGAGGAGGAGGAACAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCATTGGAGATAGCCTGGGAGGATTTGTTGAATATGCTGAAGAAAACTCCTCCCTCATTGACTGTGTGGAAGCAAAAATCAAGATCAGGAATAACTATTGTGGATT
TATCCCAGCGGCCGTGTGTATCAGAGAAGGGAACGAATCTTTTAACGTGCAGATTGTCACATATCAAGATGGGGATATGCTCGTGAATAGGGTCGCCGGAATCCATGGTA
GCTTCTCGTCGGAGATGGCCCACGCCTTCCACAAGGGACCTGCAGACCCGGAGTTTAGTCCCACGGGCATTTGGAGGATAGAAGATGGCACGAATTATCCGACGGTTAAT
ATCCAAAAGATATTAGATGGTACTATCGGTTCAGTGGGACAGCTGGAAAGCAATGAAGAAAGATTTGAATTATCCCGCCAAAAAAGGCCTGTGGGGGCAAGTGACCTTGG
GTTAGACTCAGATTTTTCTTTCTCCAGTCCGACAAGTAAAGATCCCGAAGAAGAAGATTATGTCGACGGCGGAATGCTTGAAGAATCTGAAGCCCAGATGGCCATGGAAG
ATTATCGTAACGAATTGATAGATGACGAGGATAATTTGGTGAATTTCCAATCTGCGAGCCTATTAGATTCTCAGAGCATTCCTCAGACTTCGAGCGTTATTCCAGAGAGC
TTGAAGATCTGCGATACTAAGGGAGACCAAATGCCTGAAACTAACGCTTTAGTTATTGATGGTCCGAAGGCTATAGCTGTTATCTCTCCTCATTGTGATCAGGGTAGTGA
CAGCAAAAATCCATTCATAGAAGGCTTCTCTATCAGCAGAGACATTGTTCTCACCTTACGGAAAAACAACCTGTGTATTAGACCCATAGCTAGTGCCAAAAAGGGAAATA
CCACGCAGAGGAGGAGGAACAGAGGATGA
Protein sequenceShow/hide protein sequence
MAIGDSLGGFVEYAEENSSLIDCVEAKIKIRNNYCGFIPAAVCIREGNESFNVQIVTYQDGDMLVNRVAGIHGSFSSEMAHAFHKGPADPEFSPTGIWRIEDGTNYPTVN
IQKILDGTIGSVGQLESNEERFELSRQKRPVGASDLGLDSDFSFSSPTSKDPEEEDYVDGGMLEESEAQMAMEDYRNELIDDEDNLVNFQSASLLDSQSIPQTSSVIPES
LKICDTKGDQMPETNALVIDGPKAIAVISPHCDQGSDSKNPFIEGFSISRDIVLTLRKNNLCIRPIASAKKGNTTQRRRNRG