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Spg001105 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001105
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAn Arabidopsis thialiana chromosome BAC genomic sequence
Genome locationscaffold8:44817386..44817847
RNA-Seq ExpressionSpg001105
SyntenySpg001105
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605498.1 hypothetical protein SDJN03_02815, partial [Cucurbita argyrosperma subsp. sororia]2.6e-6686.93Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+DNVPE T+KCFGKVGMRQKVSRRR KK     
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA

Query:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
        A +E+   +EK+RKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

XP_022946966.1 uncharacterized protein LOC111450987 [Cucurbita moschata]8.3e-6586.27Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+DN+PE T+KCFGKVGMRQKVSRRR KK     
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA

Query:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
        A +E+   +EK+RKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

XP_023006939.1 uncharacterized protein LOC111499579 [Cucurbita maxima]9.2e-6484.31Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+DNV E T+KCFGKVGMRQKVS RR KK     
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA

Query:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
            +   +EK+RKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

XP_023532318.1 uncharacterized protein LOC111794509 [Cucurbita pepo subsp. pepo]2.4e-6485.62Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+DNV E T+KCFGKVGMRQKVSRRR KK    A
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA

Query:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
           E+   +EK+RKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADN RE+H
Subjt:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

XP_038902301.1 uncharacterized protein LOC120088935 [Benincasa hispida]1.5e-6183.77Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+++VPE  T+KCF KVGMRQK+ RR+KK   TA
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA

Query:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
        A    D G AEK+RK S LKKAKELSCAALTSVFRRLLSCTAKVDVADN+REVH
Subjt:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

TrEMBL top hitse value%identityAlignment
A0A0A0KET2 Uncharacterized protein2.1e-6182.47Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+++ PE  T+KCF KVGMRQ++SRR+KKKT   
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA

Query:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
         A SE   G EK+RK S LKKAKE+SCAALTSVFRRLLSCTAKVDVAD MREVH
Subjt:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

A0A1S3CKF0 uncharacterized protein LOC1035019673.9e-6082.24Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA
        MASVCISNCINDA  PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+++ PE  T+KCF KVGMRQK+SRR+KKK   A
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA

Query:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMRE
        A+  E G G EK+RK S LKKAKE+SCAALTSVFRRLLSCTAKVDVAD MRE
Subjt:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMRE

A0A5A7SXD3 Uncharacterized protein1.6e-6182.47Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA
        MASVCISNCINDA  PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+++ PE  T+KCF KVGMRQK+SRR+KKK   A
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPE-NTSKCFGKVGMRQKVSRRRKKKTTTA

Query:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
        A+  E G G EK+RK S LKKAKE+SCAALTSVFRRLLSCTAKVDVAD MREVH
Subjt:  AAGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

A0A6J1G522 uncharacterized protein LOC1114509874.0e-6586.27Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+DN+PE T+KCFGKVGMRQKVSRRR KK     
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA

Query:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
        A +E+   +EK+RKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

A0A6J1L3K0 uncharacterized protein LOC1114995794.5e-6484.31Show/hide
Query:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA
        MASVCISNCINDAR PVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQ+YLRSYTFSRE+DNV E T+KCFGKVGMRQKVS RR KK     
Subjt:  MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAA

Query:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH
            +   +EK+RKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADN REVH
Subjt:  AGSEDGGGAEKVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein1.2e-1639.61Show/hide
Query:  MASVCISNCINDARAP--VRP--TYINLYKWPESDAEFIRSVS--SKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKK
        MAS CI +C+N  R    VRP  TY NLYKWP ++AEF+RS++     +RT+ VVDSISCRQ+YLRSYTFS E++          G  G  + V+RR  +
Subjt:  MASVCISNCINDARAP--VRP--TYINLYKWPESDAEFIRSVS--SKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKK

Query:  KTTTAAAGSEDGGGAEKVRKCSTLKKAKELSCAALT-SVFRRLLSCTAKVDVAD
                   GGG  K    + ++  K  SC      + R+ LSC +   V +
Subjt:  KTTTAAAGSEDGGGAEKVRKCSTLKKAKELSCAALT-SVFRRLLSCTAKVDVAD

AT3G46310.1 unknown protein3.9e-1240.4Show/hide
Query:  MASVCISNCIN--DARAPVRP--TYINLYKWPESDAEFIRSVSSKLN-RTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKK
        MAS CI +C+N  +    VRP  T+  ++KWP ++ EF++S+S   + R +  V+S+SCRQ+YLRSYTFSR+++N  E+     G+  + +K  R  K+
Subjt:  MASVCISNCIN--DARAPVRP--TYINLYKWPESDAEFIRSVSSKLN-RTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKK

AT5G02640.1 unknown protein3.0e-2850.93Show/hide
Query:  MASVCISNCINDA---RAPVRP---TYINLYKWPESDAEFIRSVSSKLN-RTSRVVDSISCRQLYLRSYTFSREDD-----NVPENT-SKCFGKVGMRQK
        M SVCIS+CINDA   R PVRP   +Y+NLYKWPESDAEF+RSV        +RVVDSISCRQ+YLRSYTFSREDD      V   T + C G+V  +  
Subjt:  MASVCISNCINDA---RAPVRP---TYINLYKWPESDAEFIRSVSSKLN-RTSRVVDSISCRQLYLRSYTFSREDD-----NVPENT-SKCFGKVGMRQK

Query:  VSRRRKKKTTTAAAGSEDGGGAEKVRKCSTLKKAK-ELSCAALTSVFRRLLSCTAKVDVAD
         S RRK K        E      +  K    +K K E +C+ +  +FRRLLSC A VDV D
Subjt:  VSRRRKKKTTTAAAGSEDGGGAEKVRKCSTLKKAK-ELSCAALTSVFRRLLSCTAKVDVAD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCCAACTGCATCAACGACGCTCGAGCCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATC
CGTCAGCTCCAAACTCAACCGAACCTCGCGCGTCGTCGACAGCATCTCTTGCCGCCAGTTGTATCTCAGAAGCTACACCTTCTCCAGAGAAGACGACAACGTGCCGGAGA
ACACGAGCAAGTGCTTCGGCAAAGTCGGCATGCGGCAGAAAGTTTCTCGCCGGAGAAAGAAGAAGACGACGACGGCGGCGGCGGGGTCGGAGGACGGCGGTGGCGCTGAG
AAGGTCAGGAAGTGTTCGACGCTGAAGAAGGCGAAGGAGTTATCGTGCGCCGCCTTGACGTCCGTCTTCCGGCGGTTGCTATCGTGCACCGCGAAAGTCGATGTGGCCGA
TAATATGAGAGAGGTCCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCGTCTGCATATCCAACTGCATCAACGACGCTCGAGCCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATC
CGTCAGCTCCAAACTCAACCGAACCTCGCGCGTCGTCGACAGCATCTCTTGCCGCCAGTTGTATCTCAGAAGCTACACCTTCTCCAGAGAAGACGACAACGTGCCGGAGA
ACACGAGCAAGTGCTTCGGCAAAGTCGGCATGCGGCAGAAAGTTTCTCGCCGGAGAAAGAAGAAGACGACGACGGCGGCGGCGGGGTCGGAGGACGGCGGTGGCGCTGAG
AAGGTCAGGAAGTGTTCGACGCTGAAGAAGGCGAAGGAGTTATCGTGCGCCGCCTTGACGTCCGTCTTCCGGCGGTTGCTATCGTGCACCGCGAAAGTCGATGTGGCCGA
TAATATGAGAGAGGTCCATTAG
Protein sequenceShow/hide protein sequence
MASVCISNCINDARAPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQLYLRSYTFSREDDNVPENTSKCFGKVGMRQKVSRRRKKKTTTAAAGSEDGGGAE
KVRKCSTLKKAKELSCAALTSVFRRLLSCTAKVDVADNMREVH