; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001160 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001160
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBiogenesis of lysosome-related organelles complex 1 subunit 1
Genome locationscaffold8:43585004..43590056
RNA-Seq ExpressionSpg001160
SyntenySpg001160
Gene Ontology termsGO:0016197 - endosomal transport (biological process)
GO:0031083 - BLOC-1 complex (cellular component)
InterPro domainsIPR009395 - Biogenesis of lysosome-related organelles complex 1 subunit 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149781.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Momordica charantia]1.5e-6685.81Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        M+SPSGPSRPHL +ARNRG  Q ETERLS++ GGLEASLLQMV+DHQ+ASLKLR++SEKAKKDAIQKAVRVS+LLV AVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        AATI+RF KQTDQWL  THALNTA+KEIGDFENWIKTIDF+CKSIT AIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

XP_022948128.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita moschata]1.9e-6990.97Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSG SR HL   RNRGK Q E ERLSADVGGLEASL QMVNDHQYASLKLRENSEKAKKDAIQKAVRVS+LLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        + TITRF KQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

XP_023007259.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita maxima]4.8e-6889.68Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSG SR H   ARNRGK Q E ERLSADVGGLEASL QMVNDHQYASLKLRENSEKAKKDAIQKA+RVS+LLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        + TITRF KQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

XP_023534753.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Cucurbita pepo subsp. pepo]9.7e-6990.32Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSG SR HL   RNRGK Q E ERLSADVGGLE SL QMVNDHQYASLKLRENSEKAKKDAIQKAVRVS+LLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        + TITRF KQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

XP_038900751.1 biogenesis of lysosome-related organelles complex 1 subunit 1 [Benincasa hispida]1.1e-6789.03Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        MNS SGPSRP L +A NRGK Q ETE L+A+VGGLEASLLQMVNDH YASLKLRENSEKAKKDAIQKAVRVS+LL DAVNGGVQ+SFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        A TI RFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

TrEMBL top hitse value%identityAlignment
A0A1S3CKJ9 Biogenesis of lysosome-related organelles complex 1 subunit 12.2e-6687.74Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        M S  G SRP L +  NRGK Q +TERLSADVGGLE SLLQMV+DHQYASLKLRENSEKAKKDAIQKAVRVS+LLVD VNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        A TI RFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

A0A6A6L8U3 Biogenesis of lysosome-related organelles complex 1 subunit 11.8e-4971.03Show/hide
Query:  PHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTK
        P L LAR R  S  ETE+   + GGLEASLLQ+++DH + SL+LRE +EKAKKDAI+KAVRVS+LL+DAVNGGVQESF+N+K IELEIRALAATI+RF +
Subjt:  PHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTK

Query:  QTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQ
        QTDQWL ATHA+NTA+KEIGDFENW+KT++F+CKSI  AI NI+Q
Subjt:  QTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQ

A0A6J1D9F5 Biogenesis of lysosome-related organelles complex 1 subunit 17.5e-6785.81Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        M+SPSGPSRPHL +ARNRG  Q ETERLS++ GGLEASLLQMV+DHQ+ASLKLR++SEKAKKDAIQKAVRVS+LLV AVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        AATI+RF KQTDQWL  THALNTA+KEIGDFENWIKTIDF+CKSIT AIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

A0A6J1G8I4 Biogenesis of lysosome-related organelles complex 1 subunit 19.4e-7090.97Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSG SR HL   RNRGK Q E ERLSADVGGLEASL QMVNDHQYASLKLRENSEKAKKDAIQKAVRVS+LLVDAVNGGVQESFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        + TITRF KQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

A0A6J1L4G4 Biogenesis of lysosome-related organelles complex 1 subunit 12.3e-6889.68Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL
        MNSPSG SR H   ARNRGK Q E ERLSADVGGLEASL QMVNDHQYASLKLRENSEKAKKDAIQKA+RVS+LLVDAVNGGVQ SFVNQKLIELEIRAL
Subjt:  MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRAL

Query:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
        + TITRF KQTDQWLAATHALNTAVKEIGDFENWIKTIDF+CKSITTAIHNIYQD
Subjt:  AATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

SwissProt top hitse value%identityAlignment
O22929 Biogenesis of lysosome-related organelles complex 1 subunit 15.7e-4054.14Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQP--ETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIR
        MN+P       + L+  RG+  P  E E+   +   LE+SLLQ+++D++ +SL+LRE +E+++K+AI+ A R ++LLV AVNGGV+E FVN+K IE EIR
Subjt:  MNSPSGPSRPHLLLARNRGKSQP--ETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIR

Query:  ALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
         LA T+ +F KQTDQWLA THA+N+AVKEIGDFENW+KT++F+CK IT AI NI++D
Subjt:  ALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD

P78537 Biogenesis of lysosome-related organelles complex 1 subunit 14.0e-1734.48Show/hide
Query:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  ++  LVD +N GV ++++NQ+ ++ E++ L     +F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFNCKSITTAIHNIYQ
        + + ++I TA+  +Y+
Subjt:  DFNCKSITTAIHNIYQ

Q0VFD8 Biogenesis of lysosome-related organelles complex 1 subunit 13.6e-1837.07Show/hide
Query:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +KDAI  A  ++  LVD +N GV +++VNQ+ ++ E++ L     +F KQT QW++     N A+KEIGD ENW ++I
Subjt:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFNCKSITTAIHNIYQ
        + + + I TA+  +Y+
Subjt:  DFNCKSITTAIHNIYQ

Q2NKW0 Biogenesis of lysosome-related organelles complex 1 subunit 14.0e-1734.48Show/hide
Query:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L +++ +HQ    + +E  EK +++AI  A  ++  LVD +N GV ++++NQ+ ++ E++ L     +F KQT QW+      N A+KEIGD ENW ++I
Subjt:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFNCKSITTAIHNIYQ
        + + ++I TA+  +Y+
Subjt:  DFNCKSITTAIHNIYQ

Q54VX7 Biogenesis of lysosome-related organelles complex 1 subunit 12.8e-1843.48Show/hide
Query:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI
        L ++V DHQ    KL+E +E  KK+AI     V+N L+D+VN GV   F NQK +E E R L A   +F+KQT+QW+      N ++KEIGD ENW K I
Subjt:  LLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTI

Query:  DFNCKSITTAIHNIY
        + +  +I+  I  +Y
Subjt:  DFNCKSITTAIHNIY

Arabidopsis top hitse value%identityAlignment
AT2G30330.1 GCN5L1 family protein4.1e-4154.14Show/hide
Query:  MNSPSGPSRPHLLLARNRGKSQP--ETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIR
        MN+P       + L+  RG+  P  E E+   +   LE+SLLQ+++D++ +SL+LRE +E+++K+AI+ A R ++LLV AVNGGV+E FVN+K IE EIR
Subjt:  MNSPSGPSRPHLLLARNRGKSQP--ETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIR

Query:  ALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD
         LA T+ +F KQTDQWLA THA+N+AVKEIGDFENW+KT++F+CK IT AI NI++D
Subjt:  ALAATITRFTKQTDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTCTCCGTCAGGGCCATCACGGCCGCATCTCCTCTTAGCGCGGAATCGCGGGAAGTCCCAACCGGAGACGGAGAGATTGAGCGCCGACGTTGGAGGCTTGGAAGC
TTCATTACTTCAGATGGTCAACGATCACCAGTACGCTTCTCTCAAGCTCCGAGAGAACTCCGAGAAGGCGAAGAAGGATGCCATTCAGAAGGCGGTGCGCGTTTCGAATC
TTTTAGTGGATGCCGTCAATGGTGGAGTTCAGGAATCGTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGGCTACGATTACCCGGTTTACGAAGCAG
ACCGATCAGTGGCTAGCCGCCACTCACGCTCTGAACACCGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCAATTGTAAAAGCATCACTAC
GGCCATCCATAACATTTACCAAGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTCTCCGTCAGGGCCATCACGGCCGCATCTCCTCTTAGCGCGGAATCGCGGGAAGTCCCAACCGGAGACGGAGAGATTGAGCGCCGACGTTGGAGGCTTGGAAGC
TTCATTACTTCAGATGGTCAACGATCACCAGTACGCTTCTCTCAAGCTCCGAGAGAACTCCGAGAAGGCGAAGAAGGATGCCATTCAGAAGGCGGTGCGCGTTTCGAATC
TTTTAGTGGATGCCGTCAATGGTGGAGTTCAGGAATCGTTTGTCAATCAGAAGTTGATTGAGCTTGAAATTAGGGCTTTAGCGGCTACGATTACCCGGTTTACGAAGCAG
ACCGATCAGTGGCTAGCCGCCACTCACGCTCTGAACACCGCCGTTAAGGAAATTGGAGATTTTGAGAACTGGATAAAGACCATCGATTTCAATTGTAAAAGCATCACTAC
GGCCATCCATAACATTTACCAAGACTGA
Protein sequenceShow/hide protein sequence
MNSPSGPSRPHLLLARNRGKSQPETERLSADVGGLEASLLQMVNDHQYASLKLRENSEKAKKDAIQKAVRVSNLLVDAVNGGVQESFVNQKLIELEIRALAATITRFTKQ
TDQWLAATHALNTAVKEIGDFENWIKTIDFNCKSITTAIHNIYQD