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Spg001161 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001161
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationscaffold8:34357167..34358575
RNA-Seq ExpressionSpg001161
SyntenySpg001161
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-1728.76Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M W       A+ P     D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D   +LN+CN  +  ME +HYMY++PI P P  RRR 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------
                                         +VQE        P  + EV  H  +++PP TQTQ      +PVM  P                    
Subjt:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------

Query:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR
                        ++D  + PSSS   G GRGRG H +Y+Y                      P +  E+ ++E  E+   Q  ++RRRQPARNRRR
Subjt:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR

Query:  PPYGTH
        P  GTH
Subjt:  PPYGTH

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]2.2e-2031.13Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-HILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI
        D D+  +Y+ WY NITR +ITR GA+ G++ +   R+RD+++D+   L++CN+ +  ME++H MY++PI PP  P  R    V+E ++            
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-HILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI

Query:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAG---PSTPVMTTPPSWHDYEAG------------------PSSSSAQGRGR
                                     +  +HNVE++P  TQTQ   G   P T + T    + D+E G                  PS+S   G  R
Subjt:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAG---PSTPVMTTPPSWHDYEAG------------------PSSSSAQGRGR

Query:  GRGDHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH
        G G+H +Y+Y           E  +EP  +ED +    ++RRRQP RNRRRP  GTH
Subjt:  GRGDHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]9.1e-1929.74Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M W       A+ P     D D+  +Y++WY+NI++ +IT+ GA     RS   R+R++++D   +LN+CN  +  ME +HYMY++PI P P  RRR 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP---PSWHDYEAG--------
                                         +VQE        P  + EV  H  E++PP TQTQ      +PVM  P    +++D E G        
Subjt:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP---PSWHDYEAG--------

Query:  -----------------------PSSSSAQGRGRGRGDHAQYVY---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRR
                               PSSS   G GRGRG+H +Y+Y   P  + E+  E                     +E+   Q  ++RRRQPARNRRR
Subjt:  -----------------------PSSSSAQGRGRGRGDHAQYVY---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRR

Query:  PPYGTH
        P  GTH
Subjt:  PPYGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.3e-1728.76Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M W       A+ P     D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D   +LN+CN  +  ME +HYMY++PI P P  RRR 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------
                                         +VQE        P  + EV  H  +++PP TQTQ      +PVM  P                    
Subjt:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------

Query:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR
                        ++D  + PSSS   G GRGRG H +Y+Y                      P +  E+ ++E  E+   Q  ++RRRQPARNRRR
Subjt:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR

Query:  PPYGTH
        P  GTH
Subjt:  PPYGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]1.8e-1931.52Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI
        D D+  +Y+  Y NITR +ITR GA  G  RS   R+RD+  D   +L++CN+ +  ME++H +Y++PI PPP  R R    V+E ++            
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI

Query:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTPPSWHDY---------------------EAGPSSSSAQGRGR
                                     +  +HNVE++PP TQTQ   G  +P+   P     Y                     + GPS+S   G GR
Subjt:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTPPSWHDY---------------------EAGPSSSSAQGRGR

Query:  GRGDHAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH
        G G+H +Y+Y   PT      E  +EP+ +ED +    ++RRRQPARNR+    GTH
Subjt:  GRGDHAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH

TrEMBL top hitse value%identityAlignment
A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein6.3e-1828.76Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M W       A+ P     D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D   +LN+CN  +  ME +HYMY++PI P P  RRR 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------
                                         +VQE        P  + EV  H  +++PP TQTQ      +PVM  P                    
Subjt:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------

Query:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR
                        ++D  + PSSS   G GRGRG H +Y+Y                      P +  E+ ++E  E+   Q  ++RRRQPARNRRR
Subjt:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR

Query:  PPYGTH
        P  GTH
Subjt:  PPYGTH

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.0e-2031.13Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-HILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI
        D D+  +Y+ WY NITR +ITR GA+ G++ +   R+RD+++D+   L++CN+ +  ME++H MY++PI PP  P  R    V+E ++            
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDM-HILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI

Query:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAG---PSTPVMTTPPSWHDYEAG------------------PSSSSAQGRGR
                                     +  +HNVE++P  TQTQ   G   P T + T    + D+E G                  PS+S   G  R
Subjt:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAG---PSTPVMTTPPSWHDYEAG------------------PSSSSAQGRGR

Query:  GRGDHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH
        G G+H +Y+Y           E  +EP  +ED +    ++RRRQP RNRRRP  GTH
Subjt:  GRGDHAQYVY---------PTELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X14.4e-1929.74Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M W       A+ P     D D+  +Y++WY+NI++ +IT+ GA     RS   R+R++++D   +LN+CN  +  ME +HYMY++PI P P  RRR 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP---PSWHDYEAG--------
                                         +VQE        P  + EV  H  E++PP TQTQ      +PVM  P    +++D E G        
Subjt:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP---PSWHDYEAG--------

Query:  -----------------------PSSSSAQGRGRGRGDHAQYVY---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRR
                               PSSS   G GRGRG+H +Y+Y   P  + E+  E                     +E+   Q  ++RRRQPARNRRR
Subjt:  -----------------------PSSSSAQGRGRGRGDHAQYVY---PTELVEEPRE---------------------EEDPDDQVPRARRRQPARNRRR

Query:  PPYGTH
        P  GTH
Subjt:  PPYGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein6.3e-1828.76Show/hide
Query:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR
        ++M W       A+ P     D D+  +Y+ WY+NI++ +IT+ GA+    RS   R+R++++D   +LN+CN  +  ME +HYMY++PI P P  RRR 
Subjt:  MIMNWLVDHAVLASSP--IDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRR

Query:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------
                                         +VQE        P  + EV  H  +++PP TQTQ      +PVM  P                    
Subjt:  GAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTP--------------------

Query:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR
                        ++D  + PSSS   G GRGRG H +Y+Y                      P +  E+ ++E  E+   Q  ++RRRQPARNRRR
Subjt:  --------------PSWHDYEAGPSSSSAQGRGRGRGDHAQYVY----------------------PTELVEEPREE--EDPDDQVPRARRRQPARNRRR

Query:  PPYGTH
        P  GTH
Subjt:  PPYGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein8.9e-2031.52Show/hide
Query:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI
        D D+  +Y+  Y NITR +ITR GA  G  RS   R+RD+  D   +L++CN+ +  ME++H +Y++PI PPP  R R    V+E ++            
Subjt:  DGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSED-MHILNLCNSGDANMEQLHYMYNIPIAPPPGPRRRRGAHVQEEDVPVQEDIPVQPYI

Query:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTPPSWHDY---------------------EAGPSSSSAQGRGR
                                     +  +HNVE++PP TQTQ   G  +P+   P     Y                     + GPS+S   G GR
Subjt:  LVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTPPSWHDY---------------------EAGPSSSSAQGRGR

Query:  GRGDHAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH
        G G+H +Y+Y   PT      E  +EP+ +ED +    ++RRRQPARNR+    GTH
Subjt:  GRGDHAQYVY---PT------ELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGGGGTTGGGAACGATTCCCAACGATGGCTCCTCAACGTCGCCACATCAATGATCATGAATTGGTTGGTCGACCATGCGGTGCTCGCAAGTTCTCCAATAGATGCTGA
TGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCATATGGTCAAGCGAGGTCATGCTTCAGACGCATTC
GTGATCTCTCTGAGGATATGCATATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCCTGGACCT
AGGCGTAGAAGAGGTGCTCATGTCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCCAGTACAGCCTTATATTCTAGTATATGAGGATGTTCCAGTACAGCCTCATAT
TATAGTACAGGAGCATATTCCAGTCCAGGAGCATTTCCCACCAGTTGTACCGGAAGTATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTG
CTGGTCCGTCCACTCCAGTGATGACTACTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCACAAGGACGTGGACGTGGACGTGGAGATCATGCA
CAATATGTATACCCTACAGAGCTTGTAGAGGAACCCAGGGAAGAGGAGGATCCAGATGATCAGGTACCAAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGACGACGTCC
GCCTTATGGCACACATTAG
mRNA sequenceShow/hide mRNA sequence
TTTGGGGTTGGGAACGATTCCCAACGATGGCTCCTCAACGTCGCCACATCAATGATCATGAATTGGTTGGTCGACCATGCGGTGCTCGCAAGTTCTCCAATAGATGCTGA
TGGAGATATGGCTCCCGACTACATGGACTGGTATGAGAATATTACTAGACGATTCATCACTCGCGAGGGAGCCTCATATGGTCAAGCGAGGTCATGCTTCAGACGCATTC
GTGATCTCTCTGAGGATATGCATATCTTAAATTTGTGCAACAGTGGTGATGCCAATATGGAGCAGCTCCATTATATGTACAACATACCTATTGCACCTCCTCCTGGACCT
AGGCGTAGAAGAGGTGCTCATGTCCAAGAAGAGGATGTTCCAGTACAAGAGGATATTCCAGTACAGCCTTATATTCTAGTATATGAGGATGTTCCAGTACAGCCTCATAT
TATAGTACAGGAGCATATTCCAGTCCAGGAGCATTTCCCACCAGTTGTACCGGAAGTATTTCACCACAATGTTGAAGACATGCCTCCTTTTACTCAGACGCAGGATGGTG
CTGGTCCGTCCACTCCAGTGATGACTACTCCACCATCATGGCATGATTATGAGGCTGGTCCTTCATCGTCATCTGCACAAGGACGTGGACGTGGACGTGGAGATCATGCA
CAATATGTATACCCTACAGAGCTTGTAGAGGAACCCAGGGAAGAGGAGGATCCAGATGATCAGGTACCAAGGGCTCGTCGTCGGCAACCAGCTCGTAATCGACGACGTCC
GCCTTATGGCACACATTAG
Protein sequenceShow/hide protein sequence
FGVGNDSQRWLLNVATSMIMNWLVDHAVLASSPIDADGDMAPDYMDWYENITRRFITREGASYGQARSCFRRIRDLSEDMHILNLCNSGDANMEQLHYMYNIPIAPPPGP
RRRRGAHVQEEDVPVQEDIPVQPYILVYEDVPVQPHIIVQEHIPVQEHFPPVVPEVFHHNVEDMPPFTQTQDGAGPSTPVMTTPPSWHDYEAGPSSSSAQGRGRGRGDHA
QYVYPTELVEEPREEEDPDDQVPRARRRQPARNRRRPPYGTH