; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001165 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001165
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold8:37372977..37379216
RNA-Seq ExpressionSpg001165
SyntenySpg001165
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5470771.1 hypothetical protein F2P56_011262, partial [Juglans regia]3.2e-0925.23Show/hide
Query:  KEEEIQKLQTDDK--DILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFE--------
        KE  +Q+L T  +  DI SIP+     +D+L++     G+++VKS YHL   ++ A+E   SG    K  W++IW L + P  K+ +W+           
Subjt:  KEEEIQKLQTDDK--DILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFE--------

Query:  -RRHK-----------------AHI--------------------LELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKR
         RR K                  H+                    L +   L  +I + L  ++  E+LE++A T+  IW+ RN   + KE  +  ++ +
Subjt:  -RRHK-----------------AHI--------------------LELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKR

Query:  WIKKNLEEQRKRIA
          K  L   R+ +A
Subjt:  WIKKNLEEQRKRIA

XP_022143536.1 uncharacterized protein LOC111013413 [Momordica charantia]2.9e-1036.79Show/hide
Query:  MEEEKLLKSLDKMRLTEEEKGELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKRKVVEWGPW
        M +E L + +++++LT+EEKGE+ ++ +++I+  DK    ++ CK+LT K+I  E F+ ++ +IW V   V+++  GKNL++CKFK  + K K++  GP 
Subjt:  MEEEKLLKSLDKMRLTEEEKGELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKRKVVEWGPW

Query:  IYDKEI
         +DK +
Subjt:  IYDKEI

XP_022154990.1 uncharacterized protein LOC111022134 isoform X1 [Momordica charantia]5.5e-0934.21Show/hide
Query:  MEEEKLLKSLDKMRLTEEEK--------GELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKR
        M +E L + +++++LT+EEK        GE+ ++ +++I+  DK    ++ CK+LT K+I  E F+ ++ +IW     V+++  GKNL++CKFK  + K 
Subjt:  MEEEKLLKSLDKMRLTEEEK--------GELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKR

Query:  KVVEWGPWIYDKEI
        K++  GPW +DK +
Subjt:  KVVEWGPWIYDKEI

XP_030486817.1 uncharacterized protein LOC115703723 [Cannabis sativa]3.2e-0928.02Show/hide
Query:  TKMLQCINKLHKWNKARLKGSIQKAITAKEEEIQKLQTDDKDILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSI
        +K+   I+ L  WN  RL+     A                DIL++P  R   KDE I+  +  G+F VKSAYHL   +++    S S + + K  W  I
Subjt:  TKMLQCINKLHKWNKARLKGSIQKAITAKEEEIQKLQTDDKDILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSI

Query:  WSLNIIPKAKIGIWKVFERR-HKAHILELDGGLSLEIC----NELASV------IEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKRW----IKKN
        W  NI PK K  +W++       A +L     +S  +C    N   +V      ++K   + +   +WTIW+ RN V  N+  ++ + +  W    + + 
Subjt:  WSLNIIPKAKIGIWKVFERR-HKAHILELDGGLSLEIC----NELASV------IEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKRW----IKKN

Query:  LEEQRKR
        L+E++KR
Subjt:  LEEQRKR

XP_035539633.1 uncharacterized protein LOC108982175 [Juglans regia]2.5e-0925.23Show/hide
Query:  KEEEIQKLQTDDK--DILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFE--------
        KE  +Q+L T  +  DI SIP+     +D+L++     G+++VKS YHL+  ++ A+E   SG    K  W++IW L + P  K+ +W+           
Subjt:  KEEEIQKLQTDDK--DILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFE--------

Query:  -RRHK-----------------AHI--------------------LELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKR
         RR K                  H+                    L +   L  +I + L  ++  E+LE++A T+  IW+ RN   + KE  +  ++ +
Subjt:  -RRHK-----------------AHI--------------------LELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKR

Query:  WIKKNLEEQRKRIA
          K  L   R+ +A
Subjt:  WIKKNLEEQRKRIA

TrEMBL top hitse value%identityAlignment
A0A6J1CQJ5 uncharacterized protein LOC1110134131.4e-1036.79Show/hide
Query:  MEEEKLLKSLDKMRLTEEEKGELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKRKVVEWGPW
        M +E L + +++++LT+EEKGE+ ++ +++I+  DK    ++ CK+LT K+I  E F+ ++ +IW V   V+++  GKNL++CKFK  + K K++  GP 
Subjt:  MEEEKLLKSLDKMRLTEEEKGELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKRKVVEWGPW

Query:  IYDKEI
         +DK +
Subjt:  IYDKEI

A0A6J1DL64 uncharacterized protein LOC111022134 isoform X12.7e-0934.21Show/hide
Query:  MEEEKLLKSLDKMRLTEEEK--------GELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKR
        M +E L + +++++LT+EEK        GE+ ++ +++I+  DK    ++ CK+LT K+I  E F+ ++ +IW     V+++  GKNL++CKFK  + K 
Subjt:  MEEEKLLKSLDKMRLTEEEK--------GELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKR

Query:  KVVEWGPWIYDKEI
        K++  GPW +DK +
Subjt:  KVVEWGPWIYDKEI

A0A6J1DQC9 uncharacterized protein LOC111022134 isoform X22.7e-0934.21Show/hide
Query:  MEEEKLLKSLDKMRLTEEEK--------GELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKR
        M +E L + +++++LT+EEK        GE+ ++ +++I+  DK    ++ CK+LT K+I  E F+ ++ +IW     V+++  GKNL++CKFK  + K 
Subjt:  MEEEKLLKSLDKMRLTEEEK--------GELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKR

Query:  KVVEWGPWIYDKEI
        K++  GPW +DK +
Subjt:  KVVEWGPWIYDKEI

A0A6P9E5W8 uncharacterized protein LOC1089821751.2e-0925.23Show/hide
Query:  KEEEIQKLQTDDK--DILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFE--------
        KE  +Q+L T  +  DI SIP+     +D+L++     G+++VKS YHL+  ++ A+E   SG    K  W++IW L + P  K+ +W+           
Subjt:  KEEEIQKLQTDDK--DILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFE--------

Query:  -RRHK-----------------AHI--------------------LELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKR
         RR K                  H+                    L +   L  +I + L  ++  E+LE++A T+  IW+ RN   + KE  +  ++ +
Subjt:  -RRHK-----------------AHI--------------------LELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKR

Query:  WIKKNLEEQRKRIA
          K  L   R+ +A
Subjt:  WIKKNLEEQRKRIA

A0A803QI38 Uncharacterized protein7.8e-0941.3Show/hide
Query:  ILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFERRHKAHILELDGGLSL
        IL IP+G P + D LI+  D  G+FSVKSAYH+  N      +S S ++  K  W+++W+LN+ PK K   W+V+      HIL +  GL+L
Subjt:  ILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSLNIIPKAKIGIWKVFERRHKAHILELDGGLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGAAACTACTCAAATCTTTAGACAAGATGAGGCTAACAGAGGAGGAGAAAGGAGAACTAGTAGAAGTGGAAGACAATGACATAGACATTACAGACAAGGA
CATAGTGAACACAATAGCTTGCAAGATTCTAACCTCCAAAAGCATAAGCGCAGAAAATTTCCAAAGGCTAATTCTGAAGATATGGGGAGTAGAAGGAAAAGTCCAGATGA
AGAAAGCCGGCAAAAACTTATACATTTGCAAATTTAAAAACAAGAAAACAAAAAGAAAAGTAGTTGAATGGGGCCCTTGGATATATGATAAGGAAATATGGCATGGCTTT
GGCGAACTCCATTGGAGCTTTTGTAAAGATGGACGAAGAGGAAGAGGAAGATCGAAAGTGGGGAGAAACGTTGAAGAAAAAATCTCTGTAGCAGTTAAAGTTTCCACCGG
AGAAGGTAGCCGGACGGGGAACTCTGATGAAGACTCCGGCGAGAAAAAACCAGAAGGTAGAAAGGACAAAACTCAGCAATCACAGGTCACATCAGGGGCAGAAAATTCTG
ACACATTAGCCGTTGTACCTCAATCCTCGAAAATACAGGGAACAAATGGAGTTAAGACAAAATCGGGAAAAGGCCCAATCATGGTAGAAGGAAAAGCCCAAGACTTATTT
CAGAGAGACGACAACGCAGTCATTGTGCAGAGGAATGGGAAAGGAGAACAAGACCACCAGAGCAAGAGCATGAATGGAACCCAAAAATCTACCAAAAAATGGAAAAGGCT
GGCTAGAAACGATCCCATGCAACAAGATGAAATGGAGCTTCTGACCAGCCAAAAAGGAAAAAAGCATGGGCGTGGAGAACCTATTGTTGCGTGTTGGGAGGATTCCACAA
ACCCCTTCAACTTATCCAGAAAAGAGAGAATTCTGAGATTTGAAGGAAGCTGGACAAAGGTTAAGGGATCTAGGGAGGTGGTTGCTAACAGTTGGGCTGGCAGAATGGGT
AGAGAAGCGCAGAGGTTTAATACTAAAATGCTTCAGTGTATTAACAAGCTCCACAAGTGGAATAAAGCCCGTCTCAAGGGGAGTATTCAGAAGGCGATAACTGCAAAAGA
AGAGGAAATACAGAAGCTGCAAACAGATGACAAGGACATTCTATCCATTCCCCTAGGCCGCCCCAACGAGAAGGATGAGCTGATTTTTAACGTTGATCCCAAAGGCATGT
TTAGTGTCAAAAGTGCCTACCATCTCACAACAAACATCCAGAATGCTAGAGAGGCTTCAGGGTCTGGGATCAACAATCCAAAATTGATGTGGCGCAGCATTTGGAGCCTC
AATATCATCCCCAAGGCTAAGATTGGCATATGGAAAGTGTTCGAGAGAAGACACAAAGCACATATTCTGGAATTGGATGGAGGTCTATCCCTGGAGATCTGCAATGAATT
GGCATCAGTGATCGAGAAAGAAGATTTGGAACAAATAGCTATCACCATCTGGACGATTTGGAGCTTCAGAAACAGAGTCTCAATCAATAAGGAGAAAGTATATTTTCAAT
CAGTCAAAAGATGGATCAAAAAGAACCTGGAAGAGCAAAGGAAGAGAATTGCAAACCTGCGGGTTATAAAAAAAGTCAATCGCAGATGGCAGACAAAATCCCTCGAAGCT
CTAGCTATTAAGAAAGGATTGAAAGCGTACCTATCGAAGGACCATCCTAGAAATTCTCCGTTGATTGTGGAAGCAGACGCTTTGGAAGTGGTGCAAGTCTTGAATCATGA
AATCACGGATTTTTTGGACCTTAAAGTGATCGTGAACGAAGTGGAAGACCTTACGGCTGAAGCAGAAACAGTAGTGCTGACAGGCCCAGGATATTCGTCTTCTTCCTCCT
CCGGCCTCTTTCGCCAAATGGTCGATACGTCCTATTTTGATTGGGATGGTGAGAGTTCGCTGAATCCGAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGAGAAACTACTCAAATCTTTAGACAAGATGAGGCTAACAGAGGAGGAGAAAGGAGAACTAGTAGAAGTGGAAGACAATGACATAGACATTACAGACAAGGA
CATAGTGAACACAATAGCTTGCAAGATTCTAACCTCCAAAAGCATAAGCGCAGAAAATTTCCAAAGGCTAATTCTGAAGATATGGGGAGTAGAAGGAAAAGTCCAGATGA
AGAAAGCCGGCAAAAACTTATACATTTGCAAATTTAAAAACAAGAAAACAAAAAGAAAAGTAGTTGAATGGGGCCCTTGGATATATGATAAGGAAATATGGCATGGCTTT
GGCGAACTCCATTGGAGCTTTTGTAAAGATGGACGAAGAGGAAGAGGAAGATCGAAAGTGGGGAGAAACGTTGAAGAAAAAATCTCTGTAGCAGTTAAAGTTTCCACCGG
AGAAGGTAGCCGGACGGGGAACTCTGATGAAGACTCCGGCGAGAAAAAACCAGAAGGTAGAAAGGACAAAACTCAGCAATCACAGGTCACATCAGGGGCAGAAAATTCTG
ACACATTAGCCGTTGTACCTCAATCCTCGAAAATACAGGGAACAAATGGAGTTAAGACAAAATCGGGAAAAGGCCCAATCATGGTAGAAGGAAAAGCCCAAGACTTATTT
CAGAGAGACGACAACGCAGTCATTGTGCAGAGGAATGGGAAAGGAGAACAAGACCACCAGAGCAAGAGCATGAATGGAACCCAAAAATCTACCAAAAAATGGAAAAGGCT
GGCTAGAAACGATCCCATGCAACAAGATGAAATGGAGCTTCTGACCAGCCAAAAAGGAAAAAAGCATGGGCGTGGAGAACCTATTGTTGCGTGTTGGGAGGATTCCACAA
ACCCCTTCAACTTATCCAGAAAAGAGAGAATTCTGAGATTTGAAGGAAGCTGGACAAAGGTTAAGGGATCTAGGGAGGTGGTTGCTAACAGTTGGGCTGGCAGAATGGGT
AGAGAAGCGCAGAGGTTTAATACTAAAATGCTTCAGTGTATTAACAAGCTCCACAAGTGGAATAAAGCCCGTCTCAAGGGGAGTATTCAGAAGGCGATAACTGCAAAAGA
AGAGGAAATACAGAAGCTGCAAACAGATGACAAGGACATTCTATCCATTCCCCTAGGCCGCCCCAACGAGAAGGATGAGCTGATTTTTAACGTTGATCCCAAAGGCATGT
TTAGTGTCAAAAGTGCCTACCATCTCACAACAAACATCCAGAATGCTAGAGAGGCTTCAGGGTCTGGGATCAACAATCCAAAATTGATGTGGCGCAGCATTTGGAGCCTC
AATATCATCCCCAAGGCTAAGATTGGCATATGGAAAGTGTTCGAGAGAAGACACAAAGCACATATTCTGGAATTGGATGGAGGTCTATCCCTGGAGATCTGCAATGAATT
GGCATCAGTGATCGAGAAAGAAGATTTGGAACAAATAGCTATCACCATCTGGACGATTTGGAGCTTCAGAAACAGAGTCTCAATCAATAAGGAGAAAGTATATTTTCAAT
CAGTCAAAAGATGGATCAAAAAGAACCTGGAAGAGCAAAGGAAGAGAATTGCAAACCTGCGGGTTATAAAAAAAGTCAATCGCAGATGGCAGACAAAATCCCTCGAAGCT
CTAGCTATTAAGAAAGGATTGAAAGCGTACCTATCGAAGGACCATCCTAGAAATTCTCCGTTGATTGTGGAAGCAGACGCTTTGGAAGTGGTGCAAGTCTTGAATCATGA
AATCACGGATTTTTTGGACCTTAAAGTGATCGTGAACGAAGTGGAAGACCTTACGGCTGAAGCAGAAACAGTAGTGCTGACAGGCCCAGGATATTCGTCTTCTTCCTCCT
CCGGCCTCTTTCGCCAAATGGTCGATACGTCCTATTTTGATTGGGATGGTGAGAGTTCGCTGAATCCGAGATAG
Protein sequenceShow/hide protein sequence
MEEEKLLKSLDKMRLTEEEKGELVEVEDNDIDITDKDIVNTIACKILTSKSISAENFQRLILKIWGVEGKVQMKKAGKNLYICKFKNKKTKRKVVEWGPWIYDKEIWHGF
GELHWSFCKDGRRGRGRSKVGRNVEEKISVAVKVSTGEGSRTGNSDEDSGEKKPEGRKDKTQQSQVTSGAENSDTLAVVPQSSKIQGTNGVKTKSGKGPIMVEGKAQDLF
QRDDNAVIVQRNGKGEQDHQSKSMNGTQKSTKKWKRLARNDPMQQDEMELLTSQKGKKHGRGEPIVACWEDSTNPFNLSRKERILRFEGSWTKVKGSREVVANSWAGRMG
REAQRFNTKMLQCINKLHKWNKARLKGSIQKAITAKEEEIQKLQTDDKDILSIPLGRPNEKDELIFNVDPKGMFSVKSAYHLTTNIQNAREASGSGINNPKLMWRSIWSL
NIIPKAKIGIWKVFERRHKAHILELDGGLSLEICNELASVIEKEDLEQIAITIWTIWSFRNRVSINKEKVYFQSVKRWIKKNLEEQRKRIANLRVIKKVNRRWQTKSLEA
LAIKKGLKAYLSKDHPRNSPLIVEADALEVVQVLNHEITDFLDLKVIVNEVEDLTAEAETVVLTGPGYSSSSSSGLFRQMVDTSYFDWDGESSLNPR