CuGenDBv2

Gene ID	Spg001176
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Genome location	scaffold8:43090362..43092641
RNA-Seq Expression	Spg001176
Synteny	Spg001176
Gene Ontology terms	NA
InterPro domains	IPR010719 - Putative rRNA methylase IPR029063 - S-adenosyl-L-methionine-dependent methyltransferase

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6570591.1 hypothetical protein SDJN03_29506, partial [Cucurbita argyrosperma subsp. sororia]

9.8e-71

77.72

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY FGKKRATEVAHS                                   VWKRVIR GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LESTSALL+ESL+EKE+KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

KAG7010442.1 ytqB, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.2e-73

79.27

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY FGKKRATEVAHSY                 +++   +FF        VWKRVIR GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LESTSALL+ESL+EKE+KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

XP_022943494.1 uncharacterized protein LOC111448248 [Cucurbita moschata]

1.1e-69

77.2

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY FGKKRATEVAHS                                   VWKRVIR GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LES SALL+ESL EKE+KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

XP_022986072.1 uncharacterized protein LOC111483929 [Cucurbita maxima]

9.8e-71

77.72

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY FGKKRATEVAHS                                   VWKRVIR GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LESTSALL+ESL+EKE+KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

XP_038902806.1 putative rRNA methylase YtqB isoform X1 [Benincasa hispida]

1.4e-69

76.17

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGYFFGKKRATEVAHS                                   VWK V+RKGDTVVDATCGNGYDT AMVKMVADESGSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LE+TSA L+ESL+EKEKKLVKLSSICHSRMEDVIPE SPVRLVAFNLGYLPGGNKAITTKSETTL+AL+AA+RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KEF8 Uncharacterized protein

6.4e-68

74.61

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGYFFGKKRATEVAHS                                   VWK +++KGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQ EA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LESTSALL+ESL+EKEKKLVKLSSICHSRMEDVI E SPV LVAFNLGYLPGGNKAITTKSETT QAL+AA+RILKPGGLISLVVYVGHPGG+
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

A0A6J1D648 uncharacterized protein LOC111017978 isoform X2

6.0e-66

74.61

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY  GKKRATEVAHS                                   VWK +IR+GDTVVDAT GNGYDTLAMVKMVADESGS  VYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        L  TSALLEESL+E+E KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGG+
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

A0A6J1D7G1 uncharacterized protein LOC111017978 isoform X1

8.4e-68

75.13

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY  GKKRATEVAHS                                   VWK +IR+GDTVVDAT GNGYDTLAMVKMVADESGS  VYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        L  TSALLEESL+E+EKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGG+
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

A0A6J1FUH7 uncharacterized protein LOC111448248

5.3e-70

77.2

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY FGKKRATEVAHS                                   VWKRVIR GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LES SALL+ESL EKE+KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

A0A6J1J6K5 uncharacterized protein LOC111483929

4.8e-71

77.72

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Query:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA
        MVGY FGKKRATEVAHS                                   VWKRVIR GDTVVDATCGNGYDTLAM+KMVADE+GSARVYAMDVQKEA
Subjt:  MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEA

Query:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL
        LESTSALL+ESL+EKE+KLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAA RILKPGGLISLVVYVGHPGGL
Subjt:  LESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

SwissProt top hits

e value

%identity

Alignment

O34614 Putative rRNA methylase YtqB

6.9e-19

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Query:  KRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEALESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVA--FNLGYLPG
        K    +GD VVDAT GNG+DT  + ++V +   +  VYA D+Q+ A+ +T    +E L +  +    L    H ++ + +P  +  ++ A  FNLGYLPG
Subjt:  KRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEALESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVA--FNLGYLPG

Query:  GNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGG
        G+K+ITT   +T++A+E    I+K  GLI LVVY GHP G
Subjt:  GNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGG

Arabidopsis top hits

e value

%identity

Alignment

AT1G16445.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

9.9e-53

55.44

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Query:  VGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADES--GSARVYAMDVQKE
        VGY FG+K+ATEVAH                                    VW++VI+KGDTV+DATCGNG DTLAM+KMV  +S      VYAMD+QK+
Subjt:  VGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADES--GSARVYAMDVQKE

Query:  ALESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGG
        A+ESTS+LL++++  KEK+ VKL ++CHS+M +++PE + VR+VAFNLGYLPGGNK+I T S+TTL AL+AA RILKPGGLISLVVY+GHPGG
Subjt:  ALESTSALLEESLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGG

Sequences

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CDS sequence

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ATGGTCGGCTACTTTTTTGGAAAGAAGAGAGCGACAGAAGTTGCTCACTCGTATGTATTATCTGCTAAATTTTTGTGCATTTTTACTTATGCTGGCATGGCTAAGTACAT
CATGGTTTCTGGCATTTTTTTCTACAGAAGATTTTGCAATATAGGTGTATGGAAACGTGTCATCAGAAAAGGGGATACTGTGGTAGATGCTACTTGTGGAAATGGGTATG
ATACTCTAGCTATGGTCAAAATGGTTGCAGATGAATCTGGTTCTGCTCGTGTTTATGCGATGGATGTTCAGAAAGAGGCTTTAGAAAGTACTTCTGCATTGCTGGAAGAA
TCACTCAATGAAAAAGAGAAGAAACTTGTTAAACTCTCTTCCATTTGCCACAGCAGAATGGAGGATGTCATTCCAGAGGGTTCTCCCGTTAGGCTTGTTGCATTTAACCT
TGGCTATCTACCTGGTGGTAACAAAGCAATTACTACAAAGTCAGAAACAACATTACAAGCCCTTGAAGCTGCCAATAGAATTCTAAAACCTGGAGGACTTATCAGCCTTG
TGGTTTATGTGGGGCATCCGGGTGGACTGTAA

mRNA sequence

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Protein sequence

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MVGYFFGKKRATEVAHSYVLSAKFLCIFTYAGMAKYIMVSGIFFYRRFCNIGVWKRVIRKGDTVVDATCGNGYDTLAMVKMVADESGSARVYAMDVQKEALESTSALLEE
SLNEKEKKLVKLSSICHSRMEDVIPEGSPVRLVAFNLGYLPGGNKAITTKSETTLQALEAANRILKPGGLISLVVYVGHPGGL

Spg001176 (gene) of Sponge gourd (cylindrica) v1 genome