; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001216 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001216
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear transcription factor Y subunit
Genome locationscaffold8:47081214..47086527
RNA-Seq ExpressionSpg001216
SyntenySpg001216
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605918.1 Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia]2.2e-16190.12Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        MQSKSKSVNQ+ESEP NMQQ  SYSEPWWRSIGYNPISP A GGNVSNSPSLECTNGASESND QSMSN DLNEDDDDDTTK++QAASYGQGQ NNQHAV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAP VHGGCITQPPQLELVGHSIACA   YQDPYYAG+MAAYGHQPMGYPPF+GMPHARMALPLEV QEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        VRKPYLHESRHQHAMRRARG+GGRFAKKNE  S SSTMK+KESGSGQAISS   SSSGSEAVPGALAETWNSS+ QQEAR QLHE+YEARSYVNG+SHFH
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+AL SGERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

KAG7010273.1 Nuclear transcription factor Y subunit A-1 [Cucurbita argyrosperma subsp. argyrosperma]8.2e-16190.12Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        MQSK +SVNQLESEP NMQQ SSYSEPWWRSIGYN ISPPAAGGN+SNS SLEC NGASESNDG SMSNDDLNEDDDDDTTKDS A SYGQ Q N+QHAV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGHSIACA   YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        +RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMK K+SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAYEARSYVNGS  FH
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+ALRSGERG+DGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

XP_022148721.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]3.9e-16390.12Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        M SKSKSVNQLESEP NMQQ  SYSEPWWRSIGYNPISPPAAGGNVSNS SLECTNGASESN+GQSMSNDDLNE+DDDD TKDSQAASYGQ Q N Q AV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAPTVHGGCITQPPQLELVGH+IACA  PYQDPYY G+M AYGHQP+GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        VRKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK KE GSGQAISS SASSSGSEAVP  LAETWNSS+GQQEAR QLHE YEAR+YVNGSSHF 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+ALR+GERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

XP_022958505.1 nuclear transcription factor Y subunit A-1-like [Cucurbita moschata]2.2e-16190.12Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        MQSKSKSVNQ+ESEP NMQQ  SYSEPWWRSIGYNPISP A GGNVSNSPSLECTNGASESND QSMSN DLNEDDDDDTTK++QAASYGQGQ NNQHAV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAP VHGGCITQPPQLELVGHSIACA   YQDPYYAG+MAAYGHQPMGYPPF+GMPHARMALPLEV QEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        VRKPYLHESRHQHAMRRARG+GGRFAKKNE  S SSTMK+KESGSGQAISS   SSSGSEAVPGALAETWNSS+ QQEAR QLHE+YEARSYVNG+SHFH
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+AL SGERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

XP_023533872.1 nuclear transcription factor Y subunit A-1-like [Cucurbita pepo subsp. pepo]2.8e-16189.86Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNE-DDDDDTTKDSQAASYGQGQQNNQHA
        MQ KSKSVNQ+ESEP NMQQ  SYSEPWWRSIGYNPISP A GGNVSNSPSLECTNGASESNDGQSMSN DLNE DDDDDTTK++QAASYGQGQ NNQHA
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNE-DDDDDTTKDSQAASYGQGQQNNQHA

Query:  VSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLI
        VSTAP VHGGCITQPPQLELVGHSIACA   YQDPYYAG+MAAYGHQPMGYPPF+GMPHARMALPLEV QEPVFVNAKQYQGILRRRQARAKAEVENKLI
Subjt:  VSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLI

Query:  KVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHF
        KVRKPYLHESRHQHAMRRARG+GGRFAKKNE  S SSTMK+KESGSGQAISS   SSSGSEAVPGALAETWNSS+ QQEAR QLHE+YEARSYVNG+SHF
Subjt:  KVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHF

Query:  HNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        HNYSSFQASS+AL SGERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  HNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

TrEMBL top hitse value%identityAlignment
A0A6J1D691 Nuclear transcription factor Y subunit1.9e-16390.12Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        M SKSKSVNQLESEP NMQQ  SYSEPWWRSIGYNPISPPAAGGNVSNS SLECTNGASESN+GQSMSNDDLNE+DDDD TKDSQAASYGQ Q N Q AV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAPTVHGGCITQPPQLELVGH+IACA  PYQDPYY G+M AYGHQP+GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        VRKPYLHESRHQHAMRRARGSGGRFAKK+EVNSS STMK KE GSGQAISS SASSSGSEAVP  LAETWNSS+GQQEAR QLHE YEAR+YVNGSSHF 
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+ALR+GERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

A0A6J1FTP1 Nuclear transcription factor Y subunit8.8e-16189.83Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        MQSK +SVNQLESEP NMQQ SSYSEPWWRSIGYN ISPPAAGGN+SNS SLEC NGASESNDG SMSNDDLNEDDDDDTTKDS A SYGQ Q N+QHAV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        S APTVHGGCITQPPQLELVGHSIACA   YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        +RKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMK K+SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAY+ARSYVNGS  FH
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+ALRSGERG+DGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

A0A6J1FW74 Nuclear transcription factor Y subunit7.5e-16089.77Show/hide
Query:  SKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAVST
        SK +SVNQLESEP NMQQ SSYSEPWWRSIGYN ISPPAAGGN+SNS SLEC NGASESNDG SMSNDDLNEDDDDDTTKDS A SYGQ Q N+QHAVS 
Subjt:  SKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAVST

Query:  APTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR
        APTVHGGCITQPPQLELVGHSIACA   YQDPYYAGVMAAYGHQP GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK+R
Subjt:  APTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVR

Query:  KPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFHNY
        KPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMK K+SGSGQA SS SA SSGSEA P ALAETWNSS+GQQEAR QLHEAY+ARSYVNGS  FHNY
Subjt:  KPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFHNY

Query:  SSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        SSFQASS+ALRSGERG+DGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  SSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

A0A6J1H3M1 Nuclear transcription factor Y subunit1.0e-16190.12Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV
        MQSKSKSVNQ+ESEP NMQQ  SYSEPWWRSIGYNPISP A GGNVSNSPSLECTNGASESND QSMSN DLNEDDDDDTTK++QAASYGQGQ NNQHAV
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAV

Query:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK
        STAP VHGGCITQPPQLELVGHSIACA   YQDPYYAG+MAAYGHQPMGYPPF+GMPHARMALPLEV QEPVFVNAKQYQGILRRRQARAKAEVENKLIK
Subjt:  STAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIK

Query:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH
        VRKPYLHESRHQHAMRRARG+GGRFAKKNE  S SSTMK+KESGSGQAISS   SSSGSEAVPGALAETWNSS+ QQEAR QLHE+YEARSYVNG+SHFH
Subjt:  VRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFH

Query:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        NYSSFQASS+AL SGERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  NYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

A0A6J1K375 Nuclear transcription factor Y subunit4.4e-16089.28Show/hide
Query:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNE-DDDDDTTKDSQAASYGQGQQNNQHA
        MQSKSKSVNQ+ESEP NMQQ  SYSEPWWRSIGYNPI P A GGNVSNSPSLECTNGASESNDGQSMSN DLNE DDDDDTTK++QAASYGQ Q NNQHA
Subjt:  MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNE-DDDDDTTKDSQAASYGQGQQNNQHA

Query:  VSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLI
        VSTAP VHGGCITQPPQLELVGHSIACA   YQDPYYAG+MAAYGHQPMGYPPF+GMPHARMALPLEV QEPVFVNAKQYQGILRRRQARAKAEVENKLI
Subjt:  VSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLI

Query:  KVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHF
        KVRKPYLHESRHQHAMRRARG+GGRFAKKNE  S SSTMK KESGSGQAISS   SSSGSEAVPGAL ETWNSS+ QQEAR QLHE+YEARSYVNG+SHF
Subjt:  KVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHF

Query:  HNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
        HNYSSFQASS+AL SGERGEDGDCSGQQRGSIS+NQAAQRRLAIK
Subjt:  HNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-73.5e-2148.94Show/hide
Query:  HSIACAPTPYQDPYYAGVMAAYGHQPMG-YPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
        +S+A    PY DPYY  + A       G +   +G+    + LP +  +EPVFVNAKQY GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG
Subjt:  HSIACAPTPYQDPYYAGVMAAYGHQPMG-YPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG

Query:  SGGRF--AKKNEVNSSSSTMKAKESGSGQAISSQSASSSGS
         GGRF  AKK + +   S+ + K + S  A  S  A+SSG+
Subjt:  SGGRF--AKKNEVNSSSSTMKAKESGSGQAISSQSASSSGS

Q8VY64 Nuclear transcription factor Y subunit A-41.2e-2147.41Show/hide
Query:  PYQDPYYAGVMAAYGHQPMGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF
        PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRRRQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF
Subjt:  PYQDPYYAGVMAAYGHQPMGYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF

Query:  AKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSE
            + N      K +E  +    +S+++SS  SE
Subjt:  AKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSE

Q945M9 Nuclear transcription factor Y subunit A-91.2e-5045.4Show/hide
Query:  MQSKSKS-VNQLESEPRNMQQMSSYS-EPWWR-SIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQ
        M SKS S  N+++SE       S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D   + +   T   Q+A  G     NQ
Subjt:  MQSKSKS-VNQLESEPRNMQQMSSYS-EPWWR-SIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQ

Query:  HAVSTAPTVHGGCITQPPQLELVGHSIACAPT-PYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN
               ++H G    PP  +LVGH++  A + PYQDPYYAGVM AYGH P+G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E 
Subjt:  HAVSTAPTVHGGCITQPPQLELVGHSIACAPT-PYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN

Query:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGS
        KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  KA+E  +G    +QS SSS S+       E WN  +   +       AY+ R      
Subjt:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGS

Query:  SHFHNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
                              E+G+CSGQQ  S+S N  +Q RLAIK
Subjt:  SHFHNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

Q9LXV5 Nuclear transcription factor Y subunit A-13.9e-5751.61Show/hide
Query:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQ-----GQQ
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS SL+C NG SESND  S S D     ++D T KDSQAA+  +     G +
Subjt:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQ-----GQQ

Query:  NNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
         N  A+S    +H   + QPP  ELVGH IAC P PYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  NNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +       +++G        + +SSGSE V     ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS

Q9SYH4 Nuclear transcription factor Y subunit A-53.5e-2138.62Show/hide
Query:  GQGQQNNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQD----PYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILR
        G+  +N   +++T+  V    +   P    +  S+ CA T + +    P YA    A  H  M     +G+  +R+ LP  + + EP+FVNAKQY  ILR
Subjt:  GQGQQNNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQD----PYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILR

Query:  RRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS
        RR+ RAK E +NKLIK RKPYLHESRH HA++RARGSGGRF    ++  SS+++ + +  +GQ   S S    GS     +++ + NS+
Subjt:  RRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A98.7e-5245.4Show/hide
Query:  MQSKSKS-VNQLESEPRNMQQMSSYS-EPWWR-SIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQ
        M SKS S  N+++SE       S  S  PW R +   N  S   AG   S S +L     A ESN  +S SN D   + +   T   Q+A  G     NQ
Subjt:  MQSKSKS-VNQLESEPRNMQQMSSYS-EPWWR-SIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQ

Query:  HAVSTAPTVHGGCITQPPQLELVGHSIACAPT-PYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN
               ++H G    PP  +LVGH++  A + PYQDPYYAGVM AYGH P+G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ ILRRRQARAKAE+E 
Subjt:  HAVSTAPTVHGGCITQPPQLELVGHSIACAPT-PYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVEN

Query:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGS
        KLIK RKPYLHESRHQHAMRR RG+GGRFAKK   N+ +S  KA+E  +G    +QS SSS S+       E WN  +   +       AY+ R      
Subjt:  KLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGS

Query:  SHFHNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK
                              E+G+CSGQQ  S+S N  +Q RLAIK
Subjt:  SHFHNYSSFQASSFALRSGERGEDGDCSGQQRGSISDNQAAQRRLAIK

AT5G12840.1 nuclear factor Y, subunit A12.8e-5851.61Show/hide
Query:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQ-----GQQ
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS SL+C NG SESND  S S D     ++D T KDSQAA+  +     G +
Subjt:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQ-----GQQ

Query:  NNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
         N  A+S    +H   + QPP  ELVGH IAC P PYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  NNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +       +++G        + +SSGSE V     ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS

AT5G12840.2 nuclear factor Y, subunit A11.6e-5852.16Show/hide
Query:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAA----SYGQGQQN
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS SL+C NG SESND  S S D     ++D T KDSQAA    S   G + 
Subjt:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAA----SYGQGQQN

Query:  NQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
        N  A+S    +H   + QPP  ELVGH IAC P PYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  NQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +       +++G        + +SSGSE V     ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS

AT5G12840.3 nuclear factor Y, subunit A12.8e-5851.61Show/hide
Query:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQ-----GQQ
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS SL+C NG SESND  S S D     ++D T KDSQAA+  +     G +
Subjt:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQ-----GQQ

Query:  NNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV
         N  A+S    +H   + QPP  ELVGH IAC P PYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+
Subjt:  NNQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEV

Query:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS
        E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +       +++G        + +SSGSE V     ET NSS
Subjt:  ENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS

AT5G12840.4 nuclear factor Y, subunit A11.6e-5852.16Show/hide
Query:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAA----SYGQGQQN
        MQSK    N+ E +    +QQ   Y+EPWW++  +  +      G  SNS SL+C NG SESND  S S D     ++D T KDSQAA    S   G + 
Subjt:  MQSKSKSVNQLE-SEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAA----SYGQGQQN

Query:  NQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE
        N  A+S    +H   + QPP  ELVGH IAC P PYQDPYY G+M AYGHQ +G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GILRRR+ARAKAE+E
Subjt:  NQHAVSTAPTVHGGCITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVE

Query:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS
         K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+EV +       +++G        + +SSGSE V     ET NSS
Subjt:  NKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACGAAATATGCAGCAGATGAGTAGTTATTCTGAGCCTTGGTGGCGTAGTATTGGGTACAATCCTAT
CTCTCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCACCATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCGAATGATGATTTGAATG
AAGATGATGATGACGACACCACAAAAGATTCACAAGCTGCAAGTTATGGGCAAGGACAGCAGAATAATCAGCATGCTGTCTCTACTGCACCTACAGTGCATGGTGGATGT
ATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCACCAACTCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACC
TATGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAACCAGTTTTTGTGAATGCCAAGCAATATCAAGGGATTCTAA
GGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGGCACCAGCATGCCATGAGACGGGCAAGGGGT
AGTGGAGGACGCTTTGCCAAGAAAAATGAAGTTAACTCTTCGAGCTCTACTATGAAGGCTAAGGAATCCGGTTCTGGTCAAGCTATCTCGTCGCAGTCTGCTAGTTCATC
TGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGAATTCCTCCCATGGTCAACAAGAAGCAAGGGTCCAGTTGCATGAGGCATATGAAGCTCGTAGTTATGTGA
ATGGCAGTAGCCATTTTCATAATTACAGTAGCTTCCAAGCTTCATCATTTGCTTTGCGCTCTGGTGAGAGAGGTGAAGATGGAGACTGTTCAGGACAGCAACGAGGAAGT
ATCTCAGATAATCAGGCGGCACAGAGGCGTCTTGCCATCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACGAAATATGCAGCAGATGAGTAGTTATTCTGAGCCTTGGTGGCGTAGTATTGGGTACAATCCTAT
CTCTCCGCCAGCAGCAGGAGGAAATGTGTCCAATTCACCATCACTGGAATGCACTAATGGTGCTTCAGAATCTAATGATGGTCAGTCAATGTCGAATGATGATTTGAATG
AAGATGATGATGACGACACCACAAAAGATTCACAAGCTGCAAGTTATGGGCAAGGACAGCAGAATAATCAGCATGCTGTCTCTACTGCACCTACAGTGCATGGTGGATGT
ATCACACAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCACCAACTCCATATCAGGATCCTTATTATGCTGGAGTGATGGCTGCCTATGGGCATCAACC
TATGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCTTTGCCCCTTGAGGTGACACAGGAACCAGTTTTTGTGAATGCCAAGCAATATCAAGGGATTCTAA
GGCGAAGACAAGCACGTGCTAAAGCAGAGGTTGAGAACAAACTGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGGCACCAGCATGCCATGAGACGGGCAAGGGGT
AGTGGAGGACGCTTTGCCAAGAAAAATGAAGTTAACTCTTCGAGCTCTACTATGAAGGCTAAGGAATCCGGTTCTGGTCAAGCTATCTCGTCGCAGTCTGCTAGTTCATC
TGGTTCTGAAGCTGTGCCTGGTGCCTTGGCTGAAACCTGGAATTCCTCCCATGGTCAACAAGAAGCAAGGGTCCAGTTGCATGAGGCATATGAAGCTCGTAGTTATGTGA
ATGGCAGTAGCCATTTTCATAATTACAGTAGCTTCCAAGCTTCATCATTTGCTTTGCGCTCTGGTGAGAGAGGTGAAGATGGAGACTGTTCAGGACAGCAACGAGGAAGT
ATCTCAGATAATCAGGCGGCACAGAGGCGTCTTGCCATCAAGTGA
Protein sequenceShow/hide protein sequence
MQSKSKSVNQLESEPRNMQQMSSYSEPWWRSIGYNPISPPAAGGNVSNSPSLECTNGASESNDGQSMSNDDLNEDDDDDTTKDSQAASYGQGQQNNQHAVSTAPTVHGGC
ITQPPQLELVGHSIACAPTPYQDPYYAGVMAAYGHQPMGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARG
SGGRFAKKNEVNSSSSTMKAKESGSGQAISSQSASSSGSEAVPGALAETWNSSHGQQEARVQLHEAYEARSYVNGSSHFHNYSSFQASSFALRSGERGEDGDCSGQQRGS
ISDNQAAQRRLAIK