; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001229 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001229
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold8:41309879..41310160
RNA-Seq ExpressionSpg001229
SyntenySpg001229
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1454.17Show/hide
Query:  RLGLLCTILAGMLLIQLTAASAAEAPFFGAKIEEHQQ-------AVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSNDVN
        ++ LLC ILA +LLIQ  A++A       +   E  +        +AEAPEIRRLGKHH   S+AGGGV+IGGL TAVFA VFCYIRVTRK + V+
Subjt:  RLGLLCTILAGMLLIQLTAASAAEAPFFGAKIEEHQQ-------AVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSNDVN

KAG7034949.1 hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]7.4e-2469.9Show/hide
Query:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFF---GAKIE-EHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKS
        MAV+R GLLC +L GM L QLTAAS AEA       PFF   G ++E E+Q  VA  PEIRRLGKHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRKS
Subjt:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFF---GAKIE-EHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKS

Query:  NDV
        + V
Subjt:  NDV

KGN46704.1 hypothetical protein Csa_020980 [Cucumis sativus]4.1e-2265.69Show/hide
Query:  AVLRLGLLCTILAGMLLIQLTAASAAEAP------FFGAKIEEHQ----QAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSND
        AV+RL L+  ILAGM  IQLTAA+  EAP      FFG+KI + +      VAE P IRRLGKHHFHTS+AGG VLIG LATAVFA+VFCYIRVTRK N 
Subjt:  AVLRLGLLCTILAGMLLIQLTAASAAEAP------FFGAKIEEHQ----QAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSND

Query:  VN
        VN
Subjt:  VN

XP_022947872.1 uncharacterized protein LOC111451632 [Cucurbita moschata]7.4e-2469.9Show/hide
Query:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFF---GAKIE-EHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKS
        MAV+R GLLC +L GM L QLTAAS AEA       PFF   G ++E E+Q  VA  PEIRRLGKHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRKS
Subjt:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFF---GAKIE-EHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKS

Query:  NDV
        + V
Subjt:  NDV

XP_023532519.1 uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]5.1e-2570.19Show/hide
Query:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFFGAKI-----EEHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MAV+R GLLC +L GM L QLTAAS AEA       PFFGA+I      E+QQ VA  PEIRRLGKHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRK
Subjt:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFFGAKI-----EEHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

Query:  SNDV
         + V
Subjt:  SNDV

TrEMBL top hitse value%identityAlignment
A0A067KB75 Uncharacterized protein9.8e-1458.7Show/hide
Query:  MAVLRLGLLCTILAGMLLIQLTA-ASAAEAPFFGAK--IEEHQQAVAEAPEIRRLGKHH-FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        MA LRL + C ILAG+L++Q TA  S  ++P    +     H+   AEAPEIRRLGKHH    S+AGGGV+IGGL TA+FA VFCYIRVTRK
Subjt:  MAVLRLGLLCTILAGMLLIQLTA-ASAAEAPFFGAK--IEEHQQAVAEAPEIRRLGKHH-FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK

A0A0A0K3N0 Uncharacterized protein2.2e-1355.32Show/hide
Query:  LLCTILAGMLLIQLTAASAAE--------APFFGAKIEEHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSNDVN
        L C I+  + LIQ    S A         AP    K       VAEAPEIRRLGKHH   SMAGGGV+IGGL TAVFA VFCYIRVTRK + V+
Subjt:  LLCTILAGMLLIQLTAASAAE--------APFFGAKIEEHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSNDVN

A0A0A0KCY0 Uncharacterized protein2.0e-2265.69Show/hide
Query:  AVLRLGLLCTILAGMLLIQLTAASAAEAP------FFGAKIEEHQ----QAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSND
        AV+RL L+  ILAGM  IQLTAA+  EAP      FFG+KI + +      VAE P IRRLGKHHFHTS+AGG VLIG LATAVFA+VFCYIRVTRK N 
Subjt:  AVLRLGLLCTILAGMLLIQLTAASAAEAP------FFGAKIEEHQ----QAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSND

Query:  VN
        VN
Subjt:  VN

A0A2N9IXN3 Uncharacterized protein2.2e-1347.01Show/hide
Query:  RLGLLCTILAGMLLIQLTA--ASAAEAPFFGAKIEEHQQA--------------------------VAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVF
        RLGL C ILA +L++Q  A  +  +E   FG K +    A                          VAEAP IRR+GKHH   S+AGGGV+IGGLATA+F
Subjt:  RLGLLCTILAGMLLIQLTA--ASAAEAPFFGAKIEEHQQA--------------------------VAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVF

Query:  AVVFCYIRVTRKSNDVN
        AVVFCYIRVTRK + V+
Subjt:  AVVFCYIRVTRKSNDVN

A0A6J1G7L7 uncharacterized protein LOC1114516323.6e-2469.9Show/hide
Query:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFF---GAKIE-EHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKS
        MAV+R GLLC +L GM L QLTAAS AEA       PFF   G ++E E+Q  VA  PEIRRLGKHH HTSMAGGGVL+GGLATAVFAVVFCYIRVTRKS
Subjt:  MAVLRLGLLCTILAGMLLIQLTAASAAEA-------PFF---GAKIE-EHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKS

Query:  NDV
        + V
Subjt:  NDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein7.9e-0842.86Show/hide
Query:  LLCTILAGMLLIQLTAASAAEAPFFGAKIEEHQ--QAVAEAPEIRRL------GKHH--FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK
        +LC +L    +  + AAS+   P    K+  H+     AEAPE+  L      G HH     S+AGGGV++GGLAT    VVFCYIR TRK
Subjt:  LLCTILAGMLLIQLTAASAAEAPFFGAKIEEHQ--QAVAEAPEIRRL------GKHH--FHTSMAGGGVLIGGLATAVFAVVFCYIRVTRK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTGCTTCGACTTGGTCTGCTGTGTACGATTCTTGCCGGAATGTTGCTGATTCAACTCACGGCTGCGAGTGCCGCCGAGGCGCCGTTTTTTGGGGCTAAAATCGA
GGAGCATCAGCAGGCAGTGGCCGAAGCTCCTGAAATCCGACGGCTGGGAAAGCATCATTTTCACACCTCCATGGCCGGCGGCGGTGTGCTAATCGGCGGCCTTGCTACTG
CTGTTTTTGCTGTCGTGTTTTGTTACATAAGGGTCACTAGAAAATCAAACGATGTCAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGTGCTTCGACTTGGTCTGCTGTGTACGATTCTTGCCGGAATGTTGCTGATTCAACTCACGGCTGCGAGTGCCGCCGAGGCGCCGTTTTTTGGGGCTAAAATCGA
GGAGCATCAGCAGGCAGTGGCCGAAGCTCCTGAAATCCGACGGCTGGGAAAGCATCATTTTCACACCTCCATGGCCGGCGGCGGTGTGCTAATCGGCGGCCTTGCTACTG
CTGTTTTTGCTGTCGTGTTTTGTTACATAAGGGTCACTAGAAAATCAAACGATGTCAACTAA
Protein sequenceShow/hide protein sequence
MAVLRLGLLCTILAGMLLIQLTAASAAEAPFFGAKIEEHQQAVAEAPEIRRLGKHHFHTSMAGGGVLIGGLATAVFAVVFCYIRVTRKSNDVN