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Spg001258 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001258
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranscription factor PIF1
Genome locationscaffold8:36021617..36022045
RNA-Seq ExpressionSpg001258
SyntenySpg001258
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050609.1 transcription factor PIF1 [Cucumis melo var. makuwa]7.3e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+L+PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRAS+MARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

TYK07831.1 transcription factor PIF1 [Cucumis melo var. makuwa]7.3e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+L+PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRAS+MARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

XP_008461998.1 PREDICTED: transcription factor PIF1 [Cucumis melo]7.3e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+L+PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRAS+MARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

XP_011659164.1 transcription factor PIF1 [Cucumis sativus]5.6e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+++PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRASEMARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

XP_038898937.1 transcription factor PIF1 [Benincasa hispida]6.2e-4681.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQPEL+PSATAT+TLT R  IPP RR E Q  VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRASEMARRKLVE VNGG V+
Subjt:  ESRASEMARRKLVEAVNGGDVR

TrEMBL top hitse value%identityAlignment
A0A0A0K531 BHLH domain-containing protein2.7e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+++PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRASEMARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

A0A1S3CFZ1 transcription factor PIF13.5e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+L+PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRAS+MARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

A0A5A7UAT5 Transcription factor PIF13.5e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+L+PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRAS+MARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

A0A5D3C7G7 Transcription factor PIF13.5e-4781.97Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MASWLNYPLVEDHNFCSDLLFP+ITAP  ANPQP+L+PSATAT+TLT R  IPP RRPE Q+ VQFSRN+ATV++EPSNSKVMV+ESTVVDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRAS+MARRKLVE VNGG VR
Subjt:  ESRASEMARRKLVEAVNGGDVR

A0A6J1GMM4 transcription factor PIF1-like2.6e-4275.41Show/hide
Query:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP
        MA+WLNYPLVEDHNFCSDLLFP+I+ P  ANPQPEL+PS TATVTLT R  IPP R PEAQ+ +QFSRN+AT ++EP NSK MV+EST+VDSCDT S+GP
Subjt:  MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGP

Query:  ESRASEMARRKLVEAVNGGDVR
        ESRASEM RRKLVE V+ GDVR
Subjt:  ESRASEMARRKLVEAVNGGDVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTTGGCTCAACTATCCTCTCGTCGAGGATCATAATTTCTGCTCCGACCTCCTCTTCCCCTCCATCACCGCACCTCCTTACGCCAATCCTCAACCCGAGCTCCA
GCCGTCGGCCACGGCGACTGTCACTCTCACGCAGCGGATGTCGATTCCACCCGGACGGAGGCCTGAAGCGCAGAGCTTCGTGCAGTTCTCGAGGAACAGGGCAACAGTCA
AAACGGAACCGTCGAATTCGAAGGTCATGGTGCAGGAATCGACGGTGGTGGATTCTTGCGACACGTCGTCTATGGGGCCGGAATCTAGGGCTTCAGAGATGGCGAGGAGG
AAGCTTGTGGAGGCAGTGAACGGTGGCGATGTGCGGTGTGTGAGATCGTTCGCGGTGGCAGTGGAGTCGGAGGTGCATCAGTTGGTGGCGATGGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTTGGCTCAACTATCCTCTCGTCGAGGATCATAATTTCTGCTCCGACCTCCTCTTCCCCTCCATCACCGCACCTCCTTACGCCAATCCTCAACCCGAGCTCCA
GCCGTCGGCCACGGCGACTGTCACTCTCACGCAGCGGATGTCGATTCCACCCGGACGGAGGCCTGAAGCGCAGAGCTTCGTGCAGTTCTCGAGGAACAGGGCAACAGTCA
AAACGGAACCGTCGAATTCGAAGGTCATGGTGCAGGAATCGACGGTGGTGGATTCTTGCGACACGTCGTCTATGGGGCCGGAATCTAGGGCTTCAGAGATGGCGAGGAGG
AAGCTTGTGGAGGCAGTGAACGGTGGCGATGTGCGGTGTGTGAGATCGTTCGCGGTGGCAGTGGAGTCGGAGGTGCATCAGTTGGTGGCGATGGCATAA
Protein sequenceShow/hide protein sequence
MASWLNYPLVEDHNFCSDLLFPSITAPPYANPQPELQPSATATVTLTQRMSIPPGRRPEAQSFVQFSRNRATVKTEPSNSKVMVQESTVVDSCDTSSMGPESRASEMARR
KLVEAVNGGDVRCVRSFAVAVESEVHQLVAMA