; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001271 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001271
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpolyadenylate-binding protein RBP47
Genome locationscaffold8:36150793..36154364
RNA-Seq ExpressionSpg001271
SyntenySpg001271
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010966.1 Polyadenylate-binding protein RBP47, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-14490.51Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL
        MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM YSH PY   QQQPPP  QQQQQAQ+QRPRRQGSTDEVKTL
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL

Query:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA
        WIGDLQPWMDETYLHNCFAH GEV SVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMP+T++PFRLNWATFS SDRRPDTGSDLSIFVGDLAA
Subjt:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA

Query:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG
        DVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFVRFGDE+ERTRA+TEMNGIYCSSR MRIGVATPKKASGYQQGYSSQ AL  +    +G
Subjt:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG

TYK13563.1 polyadenylate-binding protein RBP47 [Cucumis melo var. makuwa]8.2e-14592.98Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK
        MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY  QQQQQQ P   QQQQ AQ+QRPRRQGSTDEVK
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK

Query:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL
        TLWIGDLQPWMDETYL+NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMP+TE+PFRLNWATFSA+DRRPDTGSDLSIFVGDL
Subjt:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL

Query:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ
        AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAM EMNGIYCSSR MRIGVATPKKASGYQQGY+SQ
Subjt:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ

XP_008459212.1 PREDICTED: polyadenylate-binding protein RBP47 [Cucumis melo]8.2e-14592.98Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK
        MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY  QQQQQQ P   QQQQ AQ+QRPRRQGSTDEVK
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK

Query:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL
        TLWIGDLQPWMDETYL+NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMP+TE+PFRLNWATFSA+DRRPDTGSDLSIFVGDL
Subjt:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL

Query:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ
        AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAM EMNGIYCSSR MRIGVATPKKASGYQQGY+SQ
Subjt:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ

XP_022943942.1 polyadenylate-binding protein RBP47-like [Cucurbita moschata]1.4e-14490.51Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL
        MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM YSH PY   QQQPPP  QQQQQAQ+QRPRRQGSTDEVKTL
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL

Query:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA
        WIGDLQPWMDETYLHNCFAH GEV SVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMP+T++PFRLNWATFS SDRRPDTGSDLSIFVGDLAA
Subjt:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA

Query:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG
        DVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFVRFGDE+ERTRA+TEMNGIYCSSR MRIGVATPKKASGYQQGYSSQ AL  +    +G
Subjt:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG

XP_038901011.1 polyadenylate-binding protein RBP47 [Benincasa hispida]1.1e-14490.57Show/hide
Query:  MAQPSNGADLNPQAPHP-HHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQ-QQAQTQRPRRQGSTDEVK
        MAQPSNGADLNPQAPHP HHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQ   P QQQ QQAQ+QRPRRQGSTDEVK
Subjt:  MAQPSNGADLNPQAPHP-HHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQ-QQAQTQRPRRQGSTDEVK

Query:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL
        TLWIGDLQPWMDETYL+NCFAHTGEV SVKVICNKQTGQSEGYGFVEFYSHATADK+LQNYNGAIMP+T++PFRLNWATFS++DRRPDTGSDLSIFVGDL
Subjt:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL

Query:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG
        AADVTDAMLQETFSSRY SVKGAKVVIDSNSGRSKGYGFVRF DENERTRAMTEMNGIYCSSR MRIGVATPKKASGYQQGY+SQ AL  +    +G
Subjt:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG

TrEMBL top hitse value%identityAlignment
A0A1S3C9N4 polyadenylate-binding protein RBP474.0e-14592.98Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK
        MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY  QQQQQQ P   QQQQ AQ+QRPRRQGSTDEVK
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK

Query:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL
        TLWIGDLQPWMDETYL+NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMP+TE+PFRLNWATFSA+DRRPDTGSDLSIFVGDL
Subjt:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL

Query:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ
        AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAM EMNGIYCSSR MRIGVATPKKASGYQQGY+SQ
Subjt:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ

A0A5D3CNT4 Polyadenylate-binding protein RBP474.0e-14592.98Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK
        MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY  QQQQQQ P   QQQQ AQ+QRPRRQGSTDEVK
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPY--QQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVK

Query:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL
        TLWIGDLQPWMDETYL+NCFAHTGEV SVKVICNKQTGQSEGYGFVEF+SH TA+KVLQNYNG IMP+TE+PFRLNWATFSA+DRRPDTGSDLSIFVGDL
Subjt:  TLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDL

Query:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ
        AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAM EMNGIYCSSR MRIGVATPKKASGYQQGY+SQ
Subjt:  AADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQ

A0A6J1FUF1 polyadenylate-binding protein RBP47-like6.8e-14590.51Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL
        MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM YSH PY   QQQPPP  QQQQQAQ+QRPRRQGSTDEVKTL
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL

Query:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA
        WIGDLQPWMDETYLHNCFAH GEV SVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMP+T++PFRLNWATFS SDRRPDTGSDLSIFVGDLAA
Subjt:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA

Query:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG
        DVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFVRFGDE+ERTRA+TEMNGIYCSSR MRIGVATPKKASGYQQGYSSQ AL  +    +G
Subjt:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG

A0A6J1G6T8 polyadenylate-binding protein RBP47-like2.2e-14387.92Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQ---QQQPPPPPQQQQQAQTQRPRRQGSTDEV
        MAQPSN ADLNPQ PHPHHQW+QQQ+QYQQQWMA+QYPAAAMAMM QQQMMMYPPQHY+AYSHHPYQQQ   QQQPPP  QQQQQ Q+QRPRRQGSTD+V
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQ---QQQPPPPPQQQQQAQTQRPRRQGSTDEV

Query:  KTLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGD
        KTLWIGDLQ WMDETYLHNCFAHTGEV SVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGA+MP+T++PFRLNWATFS +DRRPDTGSDLSIFVGD
Subjt:  KTLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGD

Query:  LAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG
        LAADVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFVRFGDENE++RAMTEMNGIYCSSR MRIGVATPKKASGYQQGYSSQ AL  +    +G
Subjt:  LAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG

A0A6J1JGT7 polyadenylate-binding protein RBP47-like9.8e-14490.17Show/hide
Query:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL
        MAQPSNGADLNPQAPHPH QWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYM YSH PY  QQQ PP   QQQQQAQ+QRPRRQGSTDEVKTL
Subjt:  MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTL

Query:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA
        WIGDLQPWMDETYLHNCFAH GEV SVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMP+T++PFRLNWATFS SDRRPDTGSDLSIFVGDLAA
Subjt:  WIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAA

Query:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG
        DVTDAMLQETFSS+YTSVKGAKVVIDSNSGRSKGYGFVRFGDE+ERTRA+TEMNGIYCSSR MRIGVATPKKASGYQQGYSSQ AL  +    +G
Subjt:  DVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDG

SwissProt top hitse value%identityAlignment
F4I3B3 Polyadenylate-binding protein RBP47A4.0e-8662.41Show/hide
Query:  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQ---AQTQRPRRQGSTDEVKTLWIGDLQP
        Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   YQQ  Q      QQQQQ      Q+PR     D+VKTLW+GDL  
Subjt:  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQ---AQTQRPRRQGSTDEVKTLWIGDLQP

Query:  WMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAM
        WMDETYLH CF+HT EV SVKVI NKQT QSEGYGFVEF S + A++ LQ+++G  MP+ E PFRLNWA+FS  ++R  + G DLSIFVGDLA DV+DA+
Subjt:  WMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAM

Query:  LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDGT
        L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER+RAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQ         G+G+
Subjt:  LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDGT

Q0WW84 Polyadenylate-binding protein RBP47B1.9e-8860.71Show/hide
Query:  QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQ-PPPPPQQQQQAQTQRPR
        Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM+MYP Q Y+ Y+  PYQQ   Q       QQ Q Q  +  
Subjt:  QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQ-PPPPPQQQQQAQTQRPR

Query:  RQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRP-DTG
         +GS D+VKTLW+GDL  WMDETYLH+CF+HTGEV SVKVI NK T QSEGYGFVEF S A A++VLQNY+G++MP+++ PFR+NWA+FS  ++R  + G
Subjt:  RQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRP-DTG

Query:  SDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTF
         DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDSN+GRSKGYGFVRFGDENER+RA+TEMNG YCS+R MR+G+ATPK+A   QQ +SSQ  +  
Subjt:  SDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTF

Query:  SDRRGDGT
             +G+
Subjt:  SDRRGDGT

Q9LEB3 Polyadenylate-binding protein RBP475.8e-9361.32Show/hide
Query:  NGADLNPQAPHPHHQWFQQQ------QQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKT
        NG D+N Q      Q  QQQ      QQYQQQWMAMQYPAAAMAM   QQ MMY  Q YM Y    YQQ QQQ     Q+ QQ+ TQ    Q S+++ KT
Subjt:  NGADLNPQAPHPHHQWFQQQ------QQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKT

Query:  LWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLA
        +WIGDLQ WMDE+YLH+CF+  GEV+SVK+I NKQTGQSE YGFVEF +HA A+KVLQ+YNG +MP+TE PFRLNWA FS  ++R +TGSD SIFVGDLA
Subjt:  LWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLA

Query:  ADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ----------GYSSQGALTF-
        +DVTD ML++TF+SRY S+KGAKVV+D+N+G SKGYGFVRFGDE+ER+RAMTEMNG+YCSSRAMRIGVATPKK S ++Q          GY+S GA T  
Subjt:  ADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ----------GYSSQGALTF-

Query:  SDRRGDGTEARVLYLAMD
        S   GD +   +    +D
Subjt:  SDRRGDGTEARVLYLAMD

Q9SX79 Polyadenylate-binding protein RBP47C4.2e-6757.83Show/hide
Query:  PPQHYMAYSHH---PYQQQQQQPPPPPQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCFA--HTGEVLSVKVICNKQTGQSEGY
        PP H+M Y      P+Q     PP PP  Q         Q++  + Q +   E KT+W+GDL  WMDE YL++ FA     E++SVKVI NK  G SEGY
Subjt:  PPQHYMAYSHH---PYQQQQQQPPPPPQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCFA--HTGEVLSVKVICNKQTGQSEGY

Query:  GFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF
        GFVEF SH  ADKVL+ +NG  MP+T+ PFRLNWA+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRF
Subjt:  GFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF

Query:  GDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALT
        GDENERT+AMTEMNG+ CSSRAMRIG ATP+K +GYQQ  GY   G LT
Subjt:  GDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALT

Q9SX80 Polyadenylate-binding protein RBP47C'1.2e-6956.51Show/hide
Query:  PPQHYMAYSHHPYQQQQQQPPPP----PQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCF--AHTGEVLSVKVICNKQTGQSEG
        PP H+M Y      Q    PPPP    P  Q         Q++  + Q +   E KT+W+GDLQ WMDE YL++ F  A   E++S+KVI NK  G SEG
Subjt:  PPQHYMAYSHHPYQQQQQQPPPP----PQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCF--AHTGEVLSVKVICNKQTGQSEG

Query:  YGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR
        YGFVEF SH  ADKVLQ +NGA MP+T+ PFRLNWA+FS  ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Subjt:  YGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR

Query:  FGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALTFSDRRGDGTEARVLYLAMD
        FGDENERT+AMTEMNG+ CSSRAMRIG ATP+K +GYQQ  GY   GA T S+  GD     +    +D
Subjt:  FGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALTFSDRRGDGTEARVLYLAMD

Arabidopsis top hitse value%identityAlignment
AT1G47490.1 RNA-binding protein 47C3.0e-6857.83Show/hide
Query:  PPQHYMAYSHH---PYQQQQQQPPPPPQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCFA--HTGEVLSVKVICNKQTGQSEGY
        PP H+M Y      P+Q     PP PP  Q         Q++  + Q +   E KT+W+GDL  WMDE YL++ FA     E++SVKVI NK  G SEGY
Subjt:  PPQHYMAYSHH---PYQQQQQQPPPPPQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCFA--HTGEVLSVKVICNKQTGQSEGY

Query:  GFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF
        GFVEF SH  ADKVL+ +NG  MP+T+ PFRLNWA+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRF
Subjt:  GFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF

Query:  GDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALT
        GDENERT+AMTEMNG+ CSSRAMRIG ATP+K +GYQQ  GY   G LT
Subjt:  GDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALT

AT1G47490.2 RNA-binding protein 47C3.0e-6857.83Show/hide
Query:  PPQHYMAYSHH---PYQQQQQQPPPPPQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCFA--HTGEVLSVKVICNKQTGQSEGY
        PP H+M Y      P+Q     PP PP  Q         Q++  + Q +   E KT+W+GDL  WMDE YL++ FA     E++SVKVI NK  G SEGY
Subjt:  PPQHYMAYSHH---PYQQQQQQPPPPPQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCFA--HTGEVLSVKVICNKQTGQSEGY

Query:  GFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF
        GFVEF SH  ADKVL+ +NG  MP+T+ PFRLNWA+FS  ++R  + G DLSIFVGDL+ DV+D +L ETFS +Y SVK AKVV+D+N+GRSKGYGFVRF
Subjt:  GFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRF

Query:  GDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALT
        GDENERT+AMTEMNG+ CSSRAMRIG ATP+K +GYQQ  GY   G LT
Subjt:  GDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALT

AT1G47500.1 RNA-binding protein 47C'8.4e-7156.51Show/hide
Query:  PPQHYMAYSHHPYQQQQQQPPPP----PQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCF--AHTGEVLSVKVICNKQTGQSEG
        PP H+M Y      Q    PPPP    P  Q         Q++  + Q +   E KT+W+GDLQ WMDE YL++ F  A   E++S+KVI NK  G SEG
Subjt:  PPQHYMAYSHHPYQQQQQQPPPP----PQQQQ------QAQTQRPRRQGS-TDEVKTLWIGDLQPWMDETYLHNCF--AHTGEVLSVKVICNKQTGQSEG

Query:  YGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR
        YGFVEF SH  ADKVLQ +NGA MP+T+ PFRLNWA+FS  ++R  + G DLSIFVGDLA DV+DA+L ETFS +Y SVK AKVV+D+N+GRSKGYGFVR
Subjt:  YGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVR

Query:  FGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALTFSDRRGDGTEARVLYLAMD
        FGDENERT+AMTEMNG+ CSSRAMRIG ATP+K +GYQQ  GY   GA T S+  GD     +    +D
Subjt:  FGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQ--GYSSQGALTFSDRRGDGTEARVLYLAMD

AT1G49600.1 RNA-binding protein 47A2.9e-8762.41Show/hide
Query:  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQ---AQTQRPRRQGSTDEVKTLWIGDLQP
        Q+  P  Q  QQQ Q QQQWMA   QYPAAAMAMM QQQMMMYP   Y  Y+   YQQ  Q      QQQQQ      Q+PR     D+VKTLW+GDL  
Subjt:  QAPHPHHQWFQQQQQYQQQWMA--MQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQ---AQTQRPRRQGSTDEVKTLWIGDLQP

Query:  WMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAM
        WMDETYLH CF+HT EV SVKVI NKQT QSEGYGFVEF S + A++ LQ+++G  MP+ E PFRLNWA+FS  ++R  + G DLSIFVGDLA DV+DA+
Subjt:  WMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRR-PDTGSDLSIFVGDLAADVTDAM

Query:  LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDGT
        L ETF+ RY SVKGAKVVIDSN+GRSKGYGFVRFGDENER+RAMTEMNG +CSSR MR+G+ATPK+A+ Y Q   SQ         G+G+
Subjt:  LQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDGT

AT3G19130.1 RNA-binding protein 47B1.4e-8960.71Show/hide
Query:  QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQ-PPPPPQQQQQAQTQRPR
        Q +NG+D           N Q P P  QW QQQQQ QQQWM AMQY PAAAM MM QQQM+MYP Q Y+ Y+  PYQQ   Q       QQ Q Q  +  
Subjt:  QPSNGADL----------NPQAPHPHHQWFQQQQQYQQQWM-AMQY-PAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQ-PPPPPQQQQQAQTQRPR

Query:  RQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRP-DTG
         +GS D+VKTLW+GDL  WMDETYLH+CF+HTGEV SVKVI NK T QSEGYGFVEF S A A++VLQNY+G++MP+++ PFR+NWA+FS  ++R  + G
Subjt:  RQGSTDEVKTLWIGDLQPWMDETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRP-DTG

Query:  SDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTF
         DLS+FVGDL+ DVTD +L ETFS RY SVK AKVVIDSN+GRSKGYGFVRFGDENER+RA+TEMNG YCS+R MR+G+ATPK+A   QQ +SSQ  +  
Subjt:  SDLSIFVGDLAADVTDAMLQETFSSRYTSVKGAKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTF

Query:  SDRRGDGT
             +G+
Subjt:  SDRRGDGT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCCAGCCTTCCAACGGTGCTGATCTCAATCCCCAAGCCCCCCACCCCCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTA
CCCTGCCGCCGCCATGGCCATGATGCACCAGCAGCAGATGATGATGTACCCTCCTCAGCATTACATGGCGTATTCTCACCATCCTTATCAACAGCAGCAGCAGCAGCCGC
CGCCGCCGCCGCAACAGCAACAGCAAGCTCAGACGCAGCGACCTCGCAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCCTGGATGGAC
GAGACCTACCTCCATAACTGTTTCGCTCACACCGGCGAGGTTCTCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTA
TTCGCATGCAACAGCTGATAAAGTCTTGCAGAATTATAATGGTGCAATAATGCCAAGCACAGAGGTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAGTGATAGGC
GACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTTTCTAGTAGATATACATCTGTTAAAGGA
GCGAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGACTGAAATGAATGGGATTTA
TTGTTCAAGTAGAGCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAAGGTGCTCTTACATTCAGTGACAGAAGGGGTG
ATGGTACTGAGGCTAGGGTTTTATATTTAGCAATGGATATCATAGATCTTGTAATACAAGTAGAACAGCATTGGTACTGGCTGGTGGACATGCAAATGGCATGGCTGTTC
AAGGTCCACAATCAGATGGGGAGTCAAACAATACTACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCCAGCCTTCCAACGGTGCTGATCTCAATCCCCAAGCCCCCCACCCCCACCACCAATGGTTTCAACAACAACAACAGTATCAGCAGCAATGGATGGCGATGCAGTA
CCCTGCCGCCGCCATGGCCATGATGCACCAGCAGCAGATGATGATGTACCCTCCTCAGCATTACATGGCGTATTCTCACCATCCTTATCAACAGCAGCAGCAGCAGCCGC
CGCCGCCGCCGCAACAGCAACAGCAAGCTCAGACGCAGCGACCTCGCAGACAGGGGTCAACGGACGAGGTTAAGACGCTTTGGATTGGTGACCTTCAGCCCTGGATGGAC
GAGACCTACCTCCATAACTGTTTCGCTCACACCGGCGAGGTTCTCTCTGTTAAGGTTATATGCAATAAGCAAACTGGTCAATCTGAGGGCTATGGATTTGTTGAGTTCTA
TTCGCATGCAACAGCTGATAAAGTCTTGCAGAATTATAATGGTGCAATAATGCCAAGCACAGAGGTGCCTTTCCGTCTCAATTGGGCAACCTTTAGTGCAAGTGATAGGC
GACCGGACACTGGTTCTGACCTATCTATATTTGTTGGTGATTTGGCTGCTGATGTAACTGATGCTATGCTGCAAGAAACTTTTTCTAGTAGATATACATCTGTTAAAGGA
GCGAAGGTGGTTATTGATTCAAATTCAGGTCGTTCAAAAGGTTATGGATTTGTCAGGTTTGGTGATGAAAATGAAAGGACAAGGGCTATGACTGAAATGAATGGGATTTA
TTGTTCAAGTAGAGCCATGCGCATTGGTGTTGCAACACCAAAGAAAGCATCTGGATATCAACAAGGTTATTCTTCACAAGGTGCTCTTACATTCAGTGACAGAAGGGGTG
ATGGTACTGAGGCTAGGGTTTTATATTTAGCAATGGATATCATAGATCTTGTAATACAAGTAGAACAGCATTGGTACTGGCTGGTGGACATGCAAATGGCATGGCTGTTC
AAGGTCCACAATCAGATGGGGAGTCAAACAATACTACTGTAA
Protein sequenceShow/hide protein sequence
MAQPSNGADLNPQAPHPHHQWFQQQQQYQQQWMAMQYPAAAMAMMHQQQMMMYPPQHYMAYSHHPYQQQQQQPPPPPQQQQQAQTQRPRRQGSTDEVKTLWIGDLQPWMD
ETYLHNCFAHTGEVLSVKVICNKQTGQSEGYGFVEFYSHATADKVLQNYNGAIMPSTEVPFRLNWATFSASDRRPDTGSDLSIFVGDLAADVTDAMLQETFSSRYTSVKG
AKVVIDSNSGRSKGYGFVRFGDENERTRAMTEMNGIYCSSRAMRIGVATPKKASGYQQGYSSQGALTFSDRRGDGTEARVLYLAMDIIDLVIQVEQHWYWLVDMQMAWLF
KVHNQMGSQTILL