; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001307 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001307
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold8:39048485..39049568
RNA-Seq ExpressionSpg001307
SyntenySpg001307
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604930.1 putative CCR4-associated factor 1-like 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-10065.65Show/hide
Query:  GPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDA
        GPR   P+IREVWA+N + EI R DRCL SY+++SIDTEFPG I+ TPWG+IDE++Y + R NVNQTK+IQLG+T SDE G IGG WEFNF DFD E DA
Subjt:  GPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDA

Query:  HNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLED
        HNP+SI FLKQNGLDF +LK DGI +  F   F+  LRK+ I+RW+TFHGLYDIGYL+ AMGVV+ LPE++ EF  +V   VG+VRDLKH+ARFCEGLE 
Subjt:  HNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLED

Query:  GKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM
        G LGLE+LG+LL+QKR G KHHAGSDSL+TA LH K+++R++  +EICDGFLYGLS K + +
Subjt:  GKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM

KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]9.1e-10364.71Show/hide
Query:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
        M R NR  PRRR P I+EVWA NF+ EI R +RCL++  ILSIDTEFPG I++TPWGSIDE++Y+++R NVNQTKLIQLGLTASDE G++ G+WEFNF D
Subjt:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD

Query:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR
        FD + D  NPSSISFL+QNGLDF +LK  GIPL  FT NF +I+R++++ +WVTFHGLYDIGYLVKAMGV +ELPESMEEF  +V   VG VRDLK +AR
Subjt:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR

Query:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSI
        +CEGLE G++GLERLGELL +KR G KHHAGSDSLLTA +H K+   F   S   DG LYGL NKL++     MK  QTI FG+I  S+
Subjt:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSI

XP_022146113.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]9.1e-10361.79Show/hide
Query:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
        M R  R   RR    IREVW+ NF+ E++  + CL  Y IL+IDTEFPGFI++TPWG+I+E++Y + R NVN+TKLIQLGLTASDE G IG  WEFNF D
Subjt:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD

Query:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR
        FD + D HN SS+SFLKQNGLDFD+LK  GIP+  FT+    + RK++I RWVTFHGLYDIGYL+KAMGV  E+PESMEEF  LV  A+G+V DLKH+A+
Subjt:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR

Query:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPVYYFPCY--Y
        FCEGLEDGKLGLE+L +L+ QKR G+KHHAGSDSLLTA+L+ K+  +FE GSE+CDGFLYGL  KL      K+K  Q + FG+IP  +   Y PCY  Y
Subjt:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPVYYFPCY--Y

Query:  Y
        Y
Subjt:  Y

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]5.0e-10166.91Show/hide
Query:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
        M R NR  PRRR P I+EVWA NF+ EI R +RCL++  ILSIDTEFPG I++TPWGSIDE++Y+++R NVNQTKLIQLGLTASDE G++ G+WEFNF D
Subjt:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD

Query:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR
        FD + D  NPSSI+FL+QNGLDF +LK  GIPL  FT NF +I+R++++ +WVTFHGLYDIGYLVKAMGV +ELPESMEEF  +V   VG VRDLK +AR
Subjt:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR

Query:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM
        +CEGLE G++GLERLGELL +KR G KHHAGSDSLLTA +H K+   F   SE  DG LYGL NKLQ M
Subjt:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]1.7e-10966.33Show/hide
Query:  RRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHN
        R RK +I +VWA NF++EIS+ + CLE +TI+SIDTEFPGFI+ +PWGSIDE +Y++ R NVNQTKLIQLGLTA D+ GKIGG+WEFNF DFD E DA +
Subjt:  RRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHN

Query:  PSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGK
        PSS SFL+QNGLDF++LK  GIP+  FTA FV I+RK+ +FRWVTFHGLYDIGYL+KAMG+ + LPE+MEEF  +VV  +G VRDLKH+ARFCEGLEDGK
Subjt:  PSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGK

Query:  LGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEM-MKMKAVQTITFGRIPVSIPVY-YFPCY--YY
        LGLERLG+LL+QKR G KH+AGSDSLLTA+ H ++++RF+  +EICDG+LYG SNKLQ+M++ M M   + ITFG+IP +IP+Y Y P Y  YY
Subjt:  LGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEM-MKMKAVQTITFGRIPVSIPVY-YFPCY--YY

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease7.8e-10060.26Show/hide
Query:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
        M   N+    R KP+IR+VWA NF+SEI+RFD CL  +TIL+IDTEFPGFI  +P GSID+++Y++   NVNQTKLIQLG+TASD+ G+IGG+WEFNF D
Subjt:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD

Query:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR
        FD E DAH+P +I FL+ NGLD  ++K DGIP+ +FT  F+ ILRK  IFRWVTFHGLYDIGYL+KAMG++  LP+SMEEF  +VVN VG VRDLKH+A+
Subjt:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR

Query:  FCEGLED-GKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEM-MKMKAV--QTITFGRIPVSIPVYYFPC
        FCEGL+D G+LGLERLG+LL  KR G KH+AGSDSLLTA+ H +++ERF   S++C+GFLYG S  L++M+M MKMK      + F          Y PC
Subjt:  FCEGLED-GKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEM-MKMKAV--QTITFGRIPVSIPVYYFPC

Query:  YY
        Y+
Subjt:  YY

A0A5A7TRG1 Poly(A)-specific ribonuclease1.5e-9864.64Show/hide
Query:  RRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHN
        R +KP IR+VWA NF SEI++FD CL  +TIL+IDTEFPGFI  +P  SIDE+IY+N R NVNQ KLIQLG+TAS++ G+IGG+WEFNF DFD + D+H+
Subjt:  RRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHN

Query:  PSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGK
        PS+I FL++NGLDF +LK  GIP+ +FT  F+ I++K  IFRWVTFHGLYDIGYL+KAMG++  LP+SMEEF  LVVN VG VRDLKH+ARFCEGLEDG+
Subjt:  PSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGK

Query:  LGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMM
        LGLERLG++L +KR G KH+AGSDSLLTA+ H ++++RF    E+C+GFLYG S  L++M+M+
Subjt:  LGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMM

A0A6J1CXP9 Poly(A)-specific ribonuclease4.4e-10361.79Show/hide
Query:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
        M R  R   RR    IREVW+ NF+ E++  + CL  Y IL+IDTEFPGFI++TPWG+I+E++Y + R NVN+TKLIQLGLTASDE G IG  WEFNF D
Subjt:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD

Query:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR
        FD + D HN SS+SFLKQNGLDFD+LK  GIP+  FT+    + RK++I RWVTFHGLYDIGYL+KAMGV  E+PESMEEF  LV  A+G+V DLKH+A+
Subjt:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR

Query:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPVYYFPCY--Y
        FCEGLEDGKLGLE+L +L+ QKR G+KHHAGSDSLLTA+L+ K+  +FE GSE+CDGFLYGL  KL      K+K  Q + FG+IP  +   Y PCY  Y
Subjt:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPVYYFPCY--Y

Query:  Y
        Y
Subjt:  Y

A0A6J1G7L2 Poly(A)-specific ribonuclease2.4e-10166.91Show/hide
Query:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
        M R NR  PRRR P I+EVWA NF+ EI R +RCL++  ILSIDTEFPG I++TPWGSIDE++Y+++R NVNQTKLIQLGLTASDE G++ G+WEFNF D
Subjt:  MSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD

Query:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR
        FD + D  NPSSI+FL+QNGLDF +LK  GIPL  FT NF +I+R++++ +WVTFHGLYDIGYLVKAMGV +ELPESMEEF  +V   VG VRDLK +AR
Subjt:  FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIAR

Query:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM
        +CEGLE G++GLERLGELL +KR G KHHAGSDSLLTA +H K+   F   SE  DG LYGL NKLQ M
Subjt:  FCEGLEDGKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM

A0A6J1G7T4 Poly(A)-specific ribonuclease1.7e-9965.65Show/hide
Query:  GPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDA
        GPR   P+IREVWA+N + EI R DRCL SY+I+SIDTEFPG I+ TPWG+ DE++Y + R NVNQTK+IQLG+T SDE G IGG WEFNF DFD E DA
Subjt:  GPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDA

Query:  HNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLED
        HNP+SI FLKQNGLDF +LK DGI +  F   F+  L K+ I+RWVTFHGLYDIGYL+ AMGVV+ LPE++ EF  +V   VG+VRDLKH+ARFCEGLE 
Subjt:  HNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLED

Query:  GKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM
        G LGLE+LG+LL+QKR G KHHAGSDSL+TA LH K+++R++  +EICDGFLYGLS K + +
Subjt:  GKLGLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNM

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 51.6e-4640Show/hide
Query:  MIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSIS
        M  EVW WN ++E++    CL+    ++IDTEFPG ++ TP  + DE  Y++M+ NV+ T LIQLGLT   +   I   WE N  DF+      N  SI+
Subjt:  MIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSIS

Query:  FLKQNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGL
        FLK NGLD D+++ +GI +  F   F QIL  K+   RWVTF G YD  YL+K +   + LPE+ +EF   V   +G  V D+K +A  C GL   + GL
Subjt:  FLKQNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGL

Query:  ERLGELLEQKRLGSKHHAGSDSLLTAALHTKIM-----ERFEPGSEICDGFLYGLSNKLQNMEMM
        +R+ ++L+ +R+G  HHAGSDS LTA + TK++      R E      D   Y L  +    ++M
Subjt:  ERLGELLEQKRLGSKHHAGSDSLLTAALHTKIM-----ERFEPGSEICDGFLYGLSNKLQNMEMM

Q9C6M9 Putative CCR4-associated factor 1 homolog 44.3e-4739.13Show/hide
Query:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK
        EVW WN E E+     CL+ ++ ++IDTEFPG ++ TP  + +E  Y++M+ NV+ T LIQLG T  D  G I   WE N  DF+      N  SI+FLK
Subjt:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK

Query:  QNGLDFDRLKSDGIPLVTFTANFVQILR-KNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL
         NGL+ D++  +GI +  F  +F QIL+ K+    WV F G YD  YLVK +   + LPE+ EEF   V   +G  V D+K IA  C GL   + GL+R+
Subjt:  QNGLDFDRLKSDGIPLVTFTANFVQILR-KNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL

Query:  GELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPV
         ++L+ KR+G  HHAGSDS LTA + TK+        + C   +     +L+  ++M  +         IP+ IP+
Subjt:  GELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPV

Q9LXM4 Putative CCR4-associated factor 1 homolog 81.2e-4443.69Show/hide
Query:  ISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLKQNGLDFDRLK
        +S  + CL SY  ++IDTEFP  ++ T   + DE+ Y +M  +V++ KLIQLGLT  D  G+IGG WE NF DF  + DA N  SI FL++NGLD  +++
Subjt:  ISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLKQNGLDFDRLK

Query:  SDGIPLVTFTANFVQILRK-NQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKLGLERLGELLEQKRLGS
         +GI +  F +    +L+K  +   WVTFHG YDI YL+K     + LP + E F   V   +GSV DLK +A  CEGL   +LGLE L       R+G+
Subjt:  SDGIPLVTFTANFVQILRK-NQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKLGLERLGELLEQKRLGS

Query:  KHHAGSDSLLTAALHTKIMERF
         HHAGS++ LTA +  K++  F
Subjt:  KHHAGSDSLLTAALHTKIMERF

Q9SFX6 Putative CCR4-associated factor 1 homolog 32.2e-4644.1Show/hide
Query:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK
        EVW WN E E++    CL+  + ++IDTEFPG ++ TP  + +E  Y++M+ NV+ T LIQLG T  D  G     WE N  DFD      N  SI+FLK
Subjt:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK

Query:  QNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL
         NGL+ D+++ +GI +  F  +F QIL  K+    WV F G YD  YLVK +   + LPE+ EEF   V   +G  V D+K IA  C GL   + GL+R+
Subjt:  QNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL

Query:  GELLEQKRLGSKHHAGSDSLLTAALHTKI
         ++L+ KR+G  HHAGSDS LTA + TK+
Subjt:  GELLEQKRLGSKHHAGSDSLLTAALHTKI

Q9SHJ0 Probable CCR4-associated factor 1 homolog 15.7e-4738.49Show/hide
Query:  KPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSS
        +P+ R VW  N + E++R   CL+ + +++ DTE+PG I  T + S  ++ Y+ M+ NV  TKLIQ G T  +  G+IGG WE NF +F   +D  N  S
Subjt:  KPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSS

Query:  ISFLKQNGLDFDRLKSDGIPL--VTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKL
        I FL+++GLD  +++ +G+ +    F    + + R  +   +VTF G YD  Y +  +    +LPE+  EF   VV   G V D K +A FCEGL +  L
Subjt:  ISFLKQNGLDFDRLKSDGIPL--VTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKL

Query:  GLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGL
        GL +L +LL+  R+G  HHAGSDSL+TA +  K+   +E  S    G +YG+
Subjt:  GLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.0e-4838.49Show/hide
Query:  KPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSS
        +P+ R VW  N + E++R   CL+ + +++ DTE+PG I  T + S  ++ Y+ M+ NV  TKLIQ G T  +  G+IGG WE NF +F   +D  N  S
Subjt:  KPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSS

Query:  ISFLKQNGLDFDRLKSDGIPL--VTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKL
        I FL+++GLD  +++ +G+ +    F    + + R  +   +VTF G YD  Y +  +    +LPE+  EF   VV   G V D K +A FCEGL +  L
Subjt:  ISFLKQNGLDFDRLKSDGIPL--VTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKL

Query:  GLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGL
        GL +L +LL+  R+G  HHAGSDSL+TA +  K+   +E  S    G +YG+
Subjt:  GLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGL

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.5e-4744.1Show/hide
Query:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK
        EVW WN E E++    CL+  + ++IDTEFPG ++ TP  + +E  Y++M+ NV+ T LIQLG T  D  G     WE N  DFD      N  SI+FLK
Subjt:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK

Query:  QNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL
         NGL+ D+++ +GI +  F  +F QIL  K+    WV F G YD  YLVK +   + LPE+ EEF   V   +G  V D+K IA  C GL   + GL+R+
Subjt:  QNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL

Query:  GELLEQKRLGSKHHAGSDSLLTAALHTKI
         ++L+ KR+G  HHAGSDS LTA + TK+
Subjt:  GELLEQKRLGSKHHAGSDSLLTAALHTKI

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.1e-4839.13Show/hide
Query:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK
        EVW WN E E+     CL+ ++ ++IDTEFPG ++ TP  + +E  Y++M+ NV+ T LIQLG T  D  G I   WE N  DF+      N  SI+FLK
Subjt:  EVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLK

Query:  QNGLDFDRLKSDGIPLVTFTANFVQILR-KNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL
         NGL+ D++  +GI +  F  +F QIL+ K+    WV F G YD  YLVK +   + LPE+ EEF   V   +G  V D+K IA  C GL   + GL+R+
Subjt:  QNGLDFDRLKSDGIPLVTFTANFVQILR-KNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGLERL

Query:  GELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPV
         ++L+ KR+G  HHAGSDS LTA + TK+        + C   +     +L+  ++M  +         IP+ IP+
Subjt:  GELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPV

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-4740Show/hide
Query:  MIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSIS
        M  EVW WN ++E++    CL+    ++IDTEFPG ++ TP  + DE  Y++M+ NV+ T LIQLGLT   +   I   WE N  DF+      N  SI+
Subjt:  MIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSIS

Query:  FLKQNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGL
        FLK NGLD D+++ +GI +  F   F QIL  K+   RWVTF G YD  YL+K +   + LPE+ +EF   V   +G  V D+K +A  C GL   + GL
Subjt:  FLKQNGLDFDRLKSDGIPLVTFTANFVQIL-RKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGS-VRDLKHIARFCEGLEDGKLGL

Query:  ERLGELLEQKRLGSKHHAGSDSLLTAALHTKIM-----ERFEPGSEICDGFLYGLSNKLQNMEMM
        +R+ ++L+ +R+G  HHAGSDS LTA + TK++      R E      D   Y L  +    ++M
Subjt:  ERLGELLEQKRLGSKHHAGSDSLLTAALHTKIM-----ERFEPGSEICDGFLYGLSNKLQNMEMM

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.4e-4643.69Show/hide
Query:  ISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLKQNGLDFDRLK
        +S  + CL SY  ++IDTEFP  ++ T   + DE+ Y +M  +V++ KLIQLGLT  D  G+IGG WE NF DF  + DA N  SI FL++NGLD  +++
Subjt:  ISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCDFDAETDAHNPSSISFLKQNGLDFDRLK

Query:  SDGIPLVTFTANFVQILRK-NQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKLGLERLGELLEQKRLGS
         +GI +  F +    +L+K  +   WVTFHG YDI YL+K     + LP + E F   V   +GSV DLK +A  CEGL   +LGLE L       R+G+
Subjt:  SDGIPLVTFTANFVQILRK-NQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKLGLERLGELLEQKRLGS

Query:  KHHAGSDSLLTAALHTKIMERF
         HHAGS++ LTA +  K++  F
Subjt:  KHHAGSDSLLTAALHTKIMERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTTGGATCGATGAAGAAGAACAGGATGAGCCGGGAGAATCGATGGGGTCCGAGAAGACGAAAGCCGATGATTCGAGAAGTCTGGGCTTGGAATTTCGAGTCCGA
AATCTCCCGCTTCGATCGCTGCCTTGAATCGTACACGATTCTGTCGATCGACACGGAATTTCCTGGGTTTATTCAGACTACTCCTTGGGGCTCCATCGACGAACAAATTT
ATCAGAACATGCGGGTCAATGTCAATCAGACGAAATTGATCCAACTGGGTCTGACCGCCTCCGATGAATGCGGAAAGATCGGCGGCGCCTGGGAGTTCAATTTCTGTGAT
TTCGACGCCGAAACCGACGCCCACAACCCTTCCTCCATTTCATTTCTGAAACAGAACGGGCTGGATTTCGACAGACTCAAATCAGACGGGATTCCACTGGTTACATTCAC
GGCAAATTTCGTACAAATCTTAAGAAAGAACCAAATCTTCCGATGGGTCACATTCCACGGCCTGTACGATATCGGATATCTCGTGAAAGCGATGGGGGTAGTCCAGGAGT
TGCCGGAATCAATGGAGGAATTCGGGAACTTAGTGGTGAATGCAGTGGGCAGCGTGCGCGATCTGAAGCACATCGCTCGGTTCTGCGAAGGGCTGGAAGATGGGAAACTC
GGCCTGGAAAGACTGGGCGAACTTTTGGAGCAAAAGCGGTTAGGATCGAAGCACCACGCCGGGTCGGACAGTCTGCTGACGGCTGCGCTCCACACGAAGATAATGGAACG
GTTCGAACCGGGTTCGGAAATCTGCGACGGGTTTCTGTATGGGCTGTCGAATAAACTCCAAAACATGGAGATGATGAAGATGAAGGCAGTTCAGACGATAACGTTCGGGC
GAATTCCGGTTTCGATTCCGGTTTATTATTTCCCTTGTTACTATTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTTGGATCGATGAAGAAGAACAGGATGAGCCGGGAGAATCGATGGGGTCCGAGAAGACGAAAGCCGATGATTCGAGAAGTCTGGGCTTGGAATTTCGAGTCCGA
AATCTCCCGCTTCGATCGCTGCCTTGAATCGTACACGATTCTGTCGATCGACACGGAATTTCCTGGGTTTATTCAGACTACTCCTTGGGGCTCCATCGACGAACAAATTT
ATCAGAACATGCGGGTCAATGTCAATCAGACGAAATTGATCCAACTGGGTCTGACCGCCTCCGATGAATGCGGAAAGATCGGCGGCGCCTGGGAGTTCAATTTCTGTGAT
TTCGACGCCGAAACCGACGCCCACAACCCTTCCTCCATTTCATTTCTGAAACAGAACGGGCTGGATTTCGACAGACTCAAATCAGACGGGATTCCACTGGTTACATTCAC
GGCAAATTTCGTACAAATCTTAAGAAAGAACCAAATCTTCCGATGGGTCACATTCCACGGCCTGTACGATATCGGATATCTCGTGAAAGCGATGGGGGTAGTCCAGGAGT
TGCCGGAATCAATGGAGGAATTCGGGAACTTAGTGGTGAATGCAGTGGGCAGCGTGCGCGATCTGAAGCACATCGCTCGGTTCTGCGAAGGGCTGGAAGATGGGAAACTC
GGCCTGGAAAGACTGGGCGAACTTTTGGAGCAAAAGCGGTTAGGATCGAAGCACCACGCCGGGTCGGACAGTCTGCTGACGGCTGCGCTCCACACGAAGATAATGGAACG
GTTCGAACCGGGTTCGGAAATCTGCGACGGGTTTCTGTATGGGCTGTCGAATAAACTCCAAAACATGGAGATGATGAAGATGAAGGCAGTTCAGACGATAACGTTCGGGC
GAATTCCGGTTTCGATTCCGGTTTATTATTTCCCTTGTTACTATTACTGA
Protein sequenceShow/hide protein sequence
MGFGSMKKNRMSRENRWGPRRRKPMIREVWAWNFESEISRFDRCLESYTILSIDTEFPGFIQTTPWGSIDEQIYQNMRVNVNQTKLIQLGLTASDECGKIGGAWEFNFCD
FDAETDAHNPSSISFLKQNGLDFDRLKSDGIPLVTFTANFVQILRKNQIFRWVTFHGLYDIGYLVKAMGVVQELPESMEEFGNLVVNAVGSVRDLKHIARFCEGLEDGKL
GLERLGELLEQKRLGSKHHAGSDSLLTAALHTKIMERFEPGSEICDGFLYGLSNKLQNMEMMKMKAVQTITFGRIPVSIPVYYFPCYYY