; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001339 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001339
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Genome locationscaffold8:44596779..44601140
RNA-Seq ExpressionSpg001339
SyntenySpg001339
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4360260.1 hypothetical protein F8388_020551 [Cannabis sativa]1.4e-3628.25Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        F E+D S I  IP+      D +IW + P G + VKS YR+G +L ++     S+     + WK  W+ +LP ++K+ GW++  + LP+KTN+ +RGM I
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWH--HYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKL-------SLIIWWQIWTHRNSILHNKK
        +P C  C ++ ET  H  W C   + +W    ++ H                 CE   +G+  D +  +  KL       ++ I W IW +RN   +N  
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWH--HYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKL-------SLIIWWQIWTHRNSILHNKK

Query:  QPDLNQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPI
          +  Q++  +    + Y       +ND     E S          +  W+    G   +NCDA+ NS     G G+I R WDG  + AG         +
Subjt:  QPDLNQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPI

Query:  HWLEAIAVVEGLKSIP--VPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTW
           EA A++E L ++P    SPM I ++D    V  +      LT +N  I + +  +   N +SI HV R +N  AH LA+  + + +++ + + FP W
Subjt:  HWLEAIAVVEGLKSIP--VPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTW

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]5.4e-4128.72Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        FL DDAS+IL++P  +  + D + WHFD +G ++V+S Y++ +   D++    S        W++ W   +P+K KI  WK +N  LPT   +  R +D+
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNL--MLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQI
           C  C    E+  H+ W C     VW        +  ++V+D      P      W+      +  +   L +I +W++WT+RNS++H         +
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNL--MLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQI

Query:  IQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIA
        +  I+ + NE+    E   N    LS +             SW     G +KINCDAS+  +  + GVG I+R + GS++ A    +     +  LEA A
Subjt:  IQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIA

Query:  VVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP
         +EG+  +I +    VI+E+D+   ++LLS  +   TEL   I  + +L ++ N+ S   V R  N +AH +AQ A+  +S   W    P
Subjt:  VVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP

XP_006487889.1 uncharacterized protein LOC102617714 [Citrus sinensis]1.1e-3830.2Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        F+++DA++I+ I L  T + D+ +WH+D  G +SVKS Y++ ++L+   +  SSD    +  W   W ++LP KIKI  W+   ++LPT +N+  R +  
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQ
        +P+C  C  K E  IH   DCKV + VW       N     +  +    D   +  +       KE  L+L +++ W IW  +N  +   K+ D    I 
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQ

Query:  SIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVV
          E   + + + ++ +     ++ E+            + W P   G +KIN DA+ N K    G+G I+R  +G  V A  +    Q     +EA AV+
Subjt:  SIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVV

Query:  EGLKSIPVP--SPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWFVS
         G+KS      SPM I+ETDS   V L       + E +  I + +  I + N  SI + PR  N  AH LA+ A+E  +S  W   FP   VS
Subjt:  EGLKSIPVP--SPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWFVS

XP_024037590.1 uncharacterized protein LOC112097210 [Citrus clementina]3.1e-3627.23Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        F  +DA  I+ IPL    + D++IWH+D KG +SVKS Y++ ++++  E  S S  +H + +W++ W   +P K+KI  W+  +D+LPT  N+  + +  
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTW--KGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQI
         PMC  C    ET  H   +C   R +W     +SNL       E      C++ W  +       K    +++ ++ W IW  RN  L   K+ +  ++
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTW--KGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQI

Query:  IQSIEKYRNEYNK---GEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLE
        + + E     + K    E  Y+  G             N    + W P   G  K+N DA+ + +    G+G ++R  DG+   A  +++     +   E
Subjt:  IQSIEKYRNEYNK---GEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLE

Query:  AIAVVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP
        A A+  GLK +        I E+DSL  + L++  S+ LTE+   I + +  + N       H PR  N+ AH LA++A++   +  W +  P
Subjt:  AIAVVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]1.1e-3828.61Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        F   D   IL IPL   +  D +IWH+   GI+ V S Y     L+D + +S+S  +     WK+FW  +LP KIKI  W++++D LP  T+++ R +  
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQ
        +  C  CR   E+  H  + CK  + VW     H +    N   +    D+  L +  T   K++   ++  + I W IWT RN I+H KK      +  
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQ

Query:  SIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVV
            Y + Y+  +  Y+      ++  P   PA  P+S  W P + G  K+N DA+ N+  N+ G+G ++R   G+ + A  + +   +  H +EA AV 
Subjt:  SIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVV

Query:  EGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP
          L  +  +   +  +ETD+++    L G S  ++  +  I +   L+S     S+ H  R  N  AH LA+ A+  + +  W + FP
Subjt:  EGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP

TrEMBL top hitse value%identityAlignment
A0A5B7A5C8 Uncharacterized protein3.2e-3927.65Show/hide
Query:  MFLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQL----QDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIIN
        + L  D + I  IPL      D V+WHF   G+FSV+SAY + + +       E +  S+    +++WK  W+  +P+KIKI  W+   DILPT T +  
Subjt:  MFLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQL----QDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIIN

Query:  RGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDL
        R + ++  C  C  + ET +HLF  C   R VW ++  H    L  D+      DFC+L         M E+  ++  I+ W +W HRN+I+H+ +    
Subjt:  RGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDL

Query:  NQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANP--PNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHW
          +     +Y  E+              ++     +P  P    S SW+P  +G +K+N D SW    N GGVG ++R W G  +    + +        
Subjt:  NQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANP--PNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHW

Query:  LEAIAVVEG-LKSIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWFVS
         +A+A++ G L +  +    ++VE D L  +  +   S DL++L   +++ K  ++      ++HV R  N +AH LA      +S K      P+ F  
Subjt:  LEAIAVVEG-LKSIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWFVS

Query:  CNEID
            D
Subjt:  CNEID

A0A5C7H0P0 Uncharacterized protein2.6e-4128.72Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        FL DDAS+IL++P  +  + D + WHFD +G ++V+S Y++ +   D++    S        W++ W   +P+K KI  WK +N  LPT   +  R +D+
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNL--MLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQI
           C  C    E+  H+ W C     VW        +  ++V+D      P      W+      +  +   L +I +W++WT+RNS++H         +
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNL--MLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQI

Query:  IQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIA
        +  I+ + NE+    E   N    LS +             SW     G +KINCDAS+  +  + GVG I+R + GS++ A    +     +  LEA A
Subjt:  IQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIA

Query:  VVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP
         +EG+  +I +    VI+E+D+   ++LLS  +   TEL   I  + +L ++ N+ S   V R  N +AH +AQ A+  +S   W    P
Subjt:  VVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP

A0A7J6ERF5 Uncharacterized protein6.6e-3728.25Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        F E+D S I  IP+      D +IW + P G + VKS YR+G +L ++     S+     + WK  W+ +LP ++K+ GW++  + LP+KTN+ +RGM I
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVWH--HYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKL-------SLIIWWQIWTHRNSILHNKK
        +P C  C ++ ET  H  W C   + +W    ++ H                 CE   +G+  D +  +  KL       ++ I W IW +RN   +N  
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVWH--HYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKL-------SLIIWWQIWTHRNSILHNKK

Query:  QPDLNQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPI
          +  Q++  +    + Y       +ND     E S          +  W+    G   +NCDA+ NS     G G+I R WDG  + AG         +
Subjt:  QPDLNQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPI

Query:  HWLEAIAVVEGLKSIP--VPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTW
           EA A++E L ++P    SPM I ++D    V  +      LT +N  I + +  +   N +SI HV R +N  AH LA+  + + +++ + + FP W
Subjt:  HWLEAIAVVEGLKSIP--VPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTW

A0A803P5M6 Uncharacterized protein5.6e-3626.46Show/hide
Query:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI
        F + D   IL+IPL      D ++WH  P GI+SVK+ + L   L+D  ++S+S  + +   WK+FWN KLP KI+I  WK++ +ILPT   +  R +  
Subjt:  FLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDI

Query:  NPMCLFCRSKPETTIHLFWDCKVTRGVW-----HHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDL
        +  C  C S  E+  H  + CK  + +W        F  ++ M   D     +  +             ++ + +  L + W IWT RN ++H  +    
Subjt:  NPMCLFCRSKPETTIHLFWDCKVTRGVW-----HHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDL

Query:  NQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLE
          I+Q   K+  ++NK +   +      S  S     A   + + W P     +K+N DA+ N +  + G+G ILR   G+ + A  + +   +    +E
Subjt:  NQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLE

Query:  AIAVVEGLKSIPVPS-PMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP
        A A+   +  +     P+  +ETD+      L+ +++DL+  +  I + + L+S+     ++HV R  N  AH LA+ A+  +    W    P
Subjt:  AIAVVEGLKSIPVPS-PMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP

A0A803QQL5 Uncharacterized protein3.9e-3728.06Show/hide
Query:  DASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMC
        D   IL IPL      D +IWH    G ++V + Y L   + D++  S+S   +    W +FW+ +LP K+KI  WK  ND LP  T+++ R +  +  C
Subjt:  DASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMC

Query:  LFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEI----NLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQ
          C+   E+  H  + CK  R VW     HS L+      +W         +KG     +  I     ++  +   W IWT RN ++HNKK         
Subjt:  LFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEI----NLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQ

Query:  SIEKYRNEYNKGEEDYQNDGR-RLSEESPDGIP---ANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEA
            Y N +   +  YQ       S +     P     PP +  W P   G +K+N DA+ ++  N  GVG ++R   GS V A  + +   +  H +EA
Subjt:  SIEKYRNEYNKGEEDYQNDGR-RLSEESPDGIP---ANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEA

Query:  IAVVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP
        +A+   L  ++    P+  VETD+L+    L       +  N  + +   L+S     ++SHV R  N  AH LA+ A+  + +  W    P
Subjt:  IAVVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFP

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657507.4e-0922.34Show/hide
Query:  SIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMCLF
        +++L++  GA +R+    W F   G FSV+SAY       ++ T       +    +   W  ++P ++K   W + N  + T+     R +  + +C  
Subjt:  SIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMCLF

Query:  CRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTG---GDKMKEINLKLSLIIWW-QIWTHRNSILHNKKQPDLNQIIQ--
        C+   E+ +H+  DC    G+W    P         ++ + +    E  +   G   G +    +   ++IIWW   W   N    N K  D  + ++  
Subjt:  CRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTG---GDKMKEINLKLSLIIWW-QIWTHRNSILHNKKQPDLNQIIQ--

Query:  SIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSR--SWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIA
        ++E YR           + G  L      GI   P   R   W+    G  K+N D +          G +LR   G +   G+     +      E   
Subjt:  SIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSR--SWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIA

Query:  VVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMA
        V  GL  +     P V +E DS V V  L    +D   L+  +      +    +  I HV R  N +A  LA  A
Subjt:  VVEGLK-SIPVPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMA

Arabidopsis top hitse value%identityAlignment
AT1G33710.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.1e-0625.38Show/hide
Query:  WKLYNDILPTKTNIINRGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHY-----FPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLI
        W    D LPTKT + + GM +   C  C    E   HLF  C+    +WH        P  + ++ ND  +WT      L         ++++ ++  L 
Subjt:  WKLYNDILPTKTNIINRGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHY-----FPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLI

Query:  IWWQIWTHRNSILHNKKQPDLNQIIQSIEK
          + IW  RN+ LHN +    + + ++I++
Subjt:  IWWQIWTHRNSILHNKKQPDLNQIIQSIEK

AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein9.9e-0930.07Show/hide
Query:  WFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNL---MLVNDRREWTTPDFCELTWKGTGG
        WF   K+P K     W      L TK  +I+ G    P+CLFC +  ET  HLF+DC+  R VW ++    ++   +L  D   W          K    
Subjt:  WFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNL---MLVNDRREWTTPDFCELTWKGTGG

Query:  DKMKEINLKLS-LIIWWQIWTHRNSILHNKKQPDLNQIIQSIE
        DK     L+LS     + IW  RN+ LH+        +I  I+
Subjt:  DKMKEINLKLS-LIIWWQIWTHRNSILHNKKQPDLNQIIQSIE

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.3e-1023.73Show/hide
Query:  CLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIW--WQIWTHRNSILHNKKQPDLNQIIQS
        C+ C    ET  HL + C   R VW       + +      EWT   +  L W      ++ ++    +L+ W  W++W  RN ++   K+ D  ++++ 
Subjt:  CLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIW--WQIWTHRNSILHNKKQPDLNQIIQS

Query:  IEKYRNEYNKGEEDYQN-DGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVV
                 +  ED++    RR  E    G       S  W        K N DA+W  +  R G+GWILR   G  +  G R +     +   E  A+ 
Subjt:  IEKYRNEYNKGEEDYQN-DGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVV

Query:  EGLKSIP-VPSPMVIVETDSLVTVRLLSGVSTDL-TELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIE-SNSSKCWANHFPTWFVS
          + ++       +I E+D+   V LL+  S D    L   +E+ + L+ +         PR  N +A ++A+ +I  SN      +  P W  S
Subjt:  EGLKSIP-VPSPMVIVETDSLVTVRLLSGVSTDL-TELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIE-SNSSKCWANHFPTWFVS

AT3G09510.1 Ribonuclease H-like superfamily protein6.8e-1820.55Show/hide
Query:  EDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINP
        + D   I  I L  + + D++IW+++  G ++V+S Y L          + +  H    +    WN  +  K+K   W+  +  L T   +  RGM I+P
Subjt:  EDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINP

Query:  MCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCE---LTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQII
         C  C  + E+  H  + C      W      S+L+    R +  + DF E             M + +  L + + W+IW  RN+++ NK +   ++ +
Subjt:  MCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCE---LTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQII

Query:  QSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAV
         S +   +++    + +        +++P        N   W        K N DA ++ +      GWI+R   G+ ++ G   + H       E  A+
Subjt:  QSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAV

Query:  VEGLKSIPVPS-PMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWF--VSCNE
        +  L+   +     V +E D    + L++G+S   + L   +E+     +         + R  N +AH LA+     ++    +   P W     CN+
Subjt:  VEGLKSIPVPS-PMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWF--VSCNE

AT4G29090.1 Ribonuclease H-like superfamily protein1.5e-2023.24Show/hide
Query:  MFLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKE----RMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIIN
        +F E +  +I  +  G    +D   W +   G ++VKS Y +   L  I    SS     E     +++  W S+   KI+   WK  ++ LP    +  
Subjt:  MFLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKE----RMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIIN

Query:  RGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIW--WQIWTHRNSILHNKKQP
        R +     C+ C S  ET  HL + C   R  W       + + +    EW    +  L W    G+   +      L+ W  W++W +RN ++   ++ 
Subjt:  RGMDINPMCLFCRSKPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIW--WQIWTHRNSILHNKKQP

Query:  DLNQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIP-ANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIH
        +  ++++          + E+D +    R   ES    P  N  +   W P      K N DA+WN    R G+GW+LR   G     G R +     + 
Subjt:  DLNQIIQSIEKYRNEYNKGEEDYQNDGRRLSEESPDGIP-ANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIH

Query:  WLEAIAVVEGLKSIP-VPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAI
          E  A+   + S+       VI E+DS V + +L+        L   I++ + L+S         +PR  N +A ++A+ ++
Subjt:  WLEAIAVVEGLKSIP-VPSPMVIVETDSLVTVRLLSGVSTDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCCTAGAAGATGATGCTTCTATCATTCTAAACATTCCTCTGGGAGCTACAAATAGAATGGATGAAGTAATTTGGCATTTTGACCCCAAAGGCATCTTTTCGGTCAA
AAGTGCTTATCGTCTAGGCATTCAACTTCAGGATATTGAGACCGCCTCAAGCTCTGATCATCATCATAAGGAGAGGATGTGGAAATGGTTCTGGAATTCTAAATTACCAT
CCAAAATCAAAATATGTGGATGGAAGCTGTATAATGATATTCTCCCAACAAAAACAAATATTATTAACAGGGGAATGGACATTAACCCTATGTGTTTGTTTTGCAGGTCC
AAACCGGAGACGACTATACATCTTTTCTGGGACTGTAAAGTCACTAGAGGTGTATGGCATCACTATTTTCCTCATTCTAACTTAATGTTGGTTAATGACAGACGGGAATG
GACGACACCGGACTTCTGTGAGCTAACTTGGAAGGGAACAGGCGGAGACAAGATGAAGGAGATCAATTTGAAGCTTAGTCTGATTATTTGGTGGCAAATTTGGACACACA
GAAATAGTATTCTCCACAATAAGAAGCAGCCAGATCTTAACCAAATCATTCAGTCTATTGAAAAATACCGGAATGAATACAACAAAGGAGAAGAGGATTACCAAAACGAT
GGTAGACGGCTGTCCGAGGAAAGCCCCGACGGTATCCCTGCGAACCCTCCAAATTCTAGGAGTTGGCTTCCTATTAACGAAGGCTGTTGGAAGATAAATTGTGACGCATC
CTGGAACTCAAAGCTGAACAGGGGCGGTGTTGGGTGGATTCTTCGCAGGTGGGATGGATCGTCGGTCACAGCTGGATATAGGACGATCACTCATCAGTGGCCGATTCACT
GGTTGGAGGCCATTGCAGTGGTGGAGGGCTTGAAATCGATACCCGTTCCATCGCCAATGGTGATTGTGGAGACCGATTCTCTGGTGACTGTTCGTCTCCTCTCGGGTGTG
AGCACAGATCTAACCGAACTAAACGGTTTCATTGAAGAAGCTAAATCTTTAATCTCAAATAGGAATATCTCTTCAATATCACATGTGCCTAGGATACACAATTTTATGGC
CCATAAACTGGCCCAGATGGCCATTGAGTCCAATTCGTCTAAATGCTGGGCCAATCACTTTCCAACTTGGTTTGTTTCTTGTAATGAGATTGATACGGGTTTTGTCAACT
ACACTGGTGGGGGTTCCTGTCCCACAGTGAAATCCATAGGGGATCTTATGTTGAGGCTTTGTCAAAAGTTTCCACGCTTGAAGGGAAAGAATACAAGACAGGAAAAGGAT
AGCAGTCAGGTGGAACAAGCGAATCAGTACAATTACCGAAATATATGTCATACATGGAATGGTGGTGGACGAAATGCAATGTGGTCTCAGTACTGTTTAAGAAGATTTGC
AGAAATCCCGATGCTGGAAAATTCTGAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCCTAGAAGATGATGCTTCTATCATTCTAAACATTCCTCTGGGAGCTACAAATAGAATGGATGAAGTAATTTGGCATTTTGACCCCAAAGGCATCTTTTCGGTCAA
AAGTGCTTATCGTCTAGGCATTCAACTTCAGGATATTGAGACCGCCTCAAGCTCTGATCATCATCATAAGGAGAGGATGTGGAAATGGTTCTGGAATTCTAAATTACCAT
CCAAAATCAAAATATGTGGATGGAAGCTGTATAATGATATTCTCCCAACAAAAACAAATATTATTAACAGGGGAATGGACATTAACCCTATGTGTTTGTTTTGCAGGTCC
AAACCGGAGACGACTATACATCTTTTCTGGGACTGTAAAGTCACTAGAGGTGTATGGCATCACTATTTTCCTCATTCTAACTTAATGTTGGTTAATGACAGACGGGAATG
GACGACACCGGACTTCTGTGAGCTAACTTGGAAGGGAACAGGCGGAGACAAGATGAAGGAGATCAATTTGAAGCTTAGTCTGATTATTTGGTGGCAAATTTGGACACACA
GAAATAGTATTCTCCACAATAAGAAGCAGCCAGATCTTAACCAAATCATTCAGTCTATTGAAAAATACCGGAATGAATACAACAAAGGAGAAGAGGATTACCAAAACGAT
GGTAGACGGCTGTCCGAGGAAAGCCCCGACGGTATCCCTGCGAACCCTCCAAATTCTAGGAGTTGGCTTCCTATTAACGAAGGCTGTTGGAAGATAAATTGTGACGCATC
CTGGAACTCAAAGCTGAACAGGGGCGGTGTTGGGTGGATTCTTCGCAGGTGGGATGGATCGTCGGTCACAGCTGGATATAGGACGATCACTCATCAGTGGCCGATTCACT
GGTTGGAGGCCATTGCAGTGGTGGAGGGCTTGAAATCGATACCCGTTCCATCGCCAATGGTGATTGTGGAGACCGATTCTCTGGTGACTGTTCGTCTCCTCTCGGGTGTG
AGCACAGATCTAACCGAACTAAACGGTTTCATTGAAGAAGCTAAATCTTTAATCTCAAATAGGAATATCTCTTCAATATCACATGTGCCTAGGATACACAATTTTATGGC
CCATAAACTGGCCCAGATGGCCATTGAGTCCAATTCGTCTAAATGCTGGGCCAATCACTTTCCAACTTGGTTTGTTTCTTGTAATGAGATTGATACGGGTTTTGTCAACT
ACACTGGTGGGGGTTCCTGTCCCACAGTGAAATCCATAGGGGATCTTATGTTGAGGCTTTGTCAAAAGTTTCCACGCTTGAAGGGAAAGAATACAAGACAGGAAAAGGAT
AGCAGTCAGGTGGAACAAGCGAATCAGTACAATTACCGAAATATATGTCATACATGGAATGGTGGTGGACGAAATGCAATGTGGTCTCAGTACTGTTTAAGAAGATTTGC
AGAAATCCCGATGCTGGAAAATTCTGAGTGA
Protein sequenceShow/hide protein sequence
MFLEDDASIILNIPLGATNRMDEVIWHFDPKGIFSVKSAYRLGIQLQDIETASSSDHHHKERMWKWFWNSKLPSKIKICGWKLYNDILPTKTNIINRGMDINPMCLFCRS
KPETTIHLFWDCKVTRGVWHHYFPHSNLMLVNDRREWTTPDFCELTWKGTGGDKMKEINLKLSLIIWWQIWTHRNSILHNKKQPDLNQIIQSIEKYRNEYNKGEEDYQND
GRRLSEESPDGIPANPPNSRSWLPINEGCWKINCDASWNSKLNRGGVGWILRRWDGSSVTAGYRTITHQWPIHWLEAIAVVEGLKSIPVPSPMVIVETDSLVTVRLLSGV
STDLTELNGFIEEAKSLISNRNISSISHVPRIHNFMAHKLAQMAIESNSSKCWANHFPTWFVSCNEIDTGFVNYTGGGSCPTVKSIGDLMLRLCQKFPRLKGKNTRQEKD
SSQVEQANQYNYRNICHTWNGGGRNAMWSQYCLRRFAEIPMLENSE