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Spg001352 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001352
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRPM1-interacting protein 4
Genome locationscaffold8:40217029..40219230
RNA-Seq ExpressionSpg001352
SyntenySpg001352
Gene Ontology termsNA
InterPro domainsIPR008700 - RIN4, pathogenic type III effector avirulence factor Avr cleavage site
IPR040387 - RPM1-interacting protein 4/NOI4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570949.1 Protein NOI4, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3493.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP YK+G+VLGKPQPKKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
XP_022140725.1 RPM1-interacting protein 4 [Momordica charantia]1.8e-3597.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP YKHGAVLGKPQ KKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
XP_022943908.1 RPM1-interacting protein 4-like [Cucurbita moschata]2.0e-3493.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKK GG+PDSPAKDDP YK+G+VLGKPQPKKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
XP_022947539.1 uncharacterized protein LOC111451376 isoform X1 [Cucurbita moschata]1.4e-3597.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QPKKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
XP_022947540.1 uncharacterized protein LOC111451376 isoform X2 [Cucurbita moschata]1.0e-3596.05Show/hide
Query:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QPKKWFCCLQAAES
Subjt:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
TrEMBL top hitse value%identityAlignment
A0A6J1CFY0 RPM1-interacting protein 48.6e-3697.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP YKHGAVLGKPQ KKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
A0A6J1G736 uncharacterized protein LOC111451376 isoform X16.6e-3697.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QPKKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
A0A6J1G769 uncharacterized protein LOC111451376 isoform X25.1e-3696.05Show/hide
Query:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QPKKWFCCLQAAES
Subjt:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
A0A6J1I4X6 uncharacterized protein LOC111469905 isoform X25.1e-3696.05Show/hide
Query:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        +EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QPKKWFCCLQAAES
Subjt:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
A0A6J1I7R1 uncharacterized protein LOC111469905 isoform X16.6e-3697.33Show/hide
Query:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
        EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDP+YKHGAVLGK QPKKWFCCLQAAES
Subjt:  EKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCLQAAES
SwissProt top hitse value%identityAlignment
O22633 Protein NOI45.2e-2272.06Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQA
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQPKKW CC+QA
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQA
Q8GYN5 RPM1-interacting protein 41.5e-0559.38Show/hide
Query:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
        +PKFG+WD N+P+SA+G+T IFNK R E+ +G
Subjt:  LPKFGEWDVNDPASAEGFTVIFNKARNEKKTG
Arabidopsis top hitse value%identityAlignment
AT2G04410.1 RPM1-interacting protein 4 (RIN4) family protein1.5e-2477.61Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY-KHGAVLGKPQPKKWFCCLQA
        PLPKFGEWDVNDP+SAEGFTVIFNKARNEKK GG  DSP KD+P Y K+G VL KP  KKWFCC++A
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY-KHGAVLGKPQPKKWFCCLQA
AT4G35655.1 RPM1-interacting protein 4 (RIN4) family protein3.9e-1261.29Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFC
        PLPKFGEWDVNDPA+AEGFTVIF+KA  +KKTG    S +K     K   V  KP  KKW C
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFC
AT5G55850.1 RPM1-interacting protein 4 (RIN4) family protein9.5e-1964.79Show/hide
Query:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQAAES
        PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQP K    L A+ S
Subjt:  PLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQAAES
AT5G55850.2 RPM1-interacting protein 4 (RIN4) family protein4.2e-1961.54Show/hide
Query:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQAAES
        ++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQP K    L A+ S
Subjt:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQAAES
AT5G55850.3 RPM1-interacting protein 4 (RIN4) family protein2.2e-2368Show/hide
Query:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQA
        ++KG   PLPKFGEWDVNDPASAEGFTVIFNKAR+EKKTGG P SP K    +    G    KPQPKKW CC+QA
Subjt:  KEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAY--KHGAVLGKPQPKKWFCCLQA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTGCTCACTTTTGTTGTGGTTGGAGGGGTGTTTACTTGTGTTTTGGCCTCTCTGCATGATTTTGTTAATTGTCTCACCATCGCGCTGGCTCTTCCTATCATGAGGCTGAT
TAGCTGTAAGGAAAAAGGCAGTAGCAGTCCATTGCCAAAGTTCGGCGAATGGGATGTCAACGACCCTGCATCCGCTGAGGGATTCACAGTCATCTTTAATAAAGCCAGGA
ATGAGAAAAAGACTGGCGGCTTGCCTGACTCTCCAGCAAAGGATGACCCCGCATACAAGCATGGAGCTGTCCTTGGAAAGCCTCAGCCTAAAAAATGGTTTTGCTGCTTG
CAAGCTGCAGAATCATGA
mRNA sequenceShow/hide mRNA sequence
GTGCTCACTTTTGTTGTGGTTGGAGGGGTGTTTACTTGTGTTTTGGCCTCTCTGCATGATTTTGTTAATTGTCTCACCATCGCGCTGGCTCTTCCTATCATGAGGCTGAT
TAGCTGTAAGGAAAAAGGCAGTAGCAGTCCATTGCCAAAGTTCGGCGAATGGGATGTCAACGACCCTGCATCCGCTGAGGGATTCACAGTCATCTTTAATAAAGCCAGGA
ATGAGAAAAAGACTGGCGGCTTGCCTGACTCTCCAGCAAAGGATGACCCCGCATACAAGCATGGAGCTGTCCTTGGAAAGCCTCAGCCTAAAAAATGGTTTTGCTGCTTG
CAAGCTGCAGAATCATGA
Protein sequenceShow/hide protein sequence
VLTFVVVGGVFTCVLASLHDFVNCLTIALALPIMRLISCKEKGSSSPLPKFGEWDVNDPASAEGFTVIFNKARNEKKTGGLPDSPAKDDPAYKHGAVLGKPQPKKWFCCL
QAAES