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Spg001370 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001370
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2
Genome locationscaffold8:40542214..40545794
RNA-Seq ExpressionSpg001370
SyntenySpg001370
Gene Ontology termsGO:0000741 - karyogamy (biological process)
InterPro domainsIPR033251 - Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial
IPR043459 - NFD6/NOXY2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570920.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]8.8e-3492.22Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSS-PFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS PFRMAT KPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLS+SR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSS-PFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

KAG7010763.1 Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-3492.22Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSS-PFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MASIGARSVFRSFSGSARRAAAQIGSQA+ SSS PFRMAT KPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLS+SR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSS-PFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

XP_022140726.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]2.7e-3593.26Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MAS+GARSVFRSFSGSARRAAA IGS+AR SSSPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLSISR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

XP_022140727.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]2.7e-3593.26Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MAS+GARSVFRSFSGSARRAAA IGS+AR SSSPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLSISR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

XP_022140728.1 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]2.7e-3593.26Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MAS+GARSVFRSFSGSARRAAA IGS+AR SSSPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLSISR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

TrEMBL top hitse value%identityAlignment
A0A6J1CGX5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X11.3e-3593.26Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MAS+GARSVFRSFSGSARRAAA IGS+AR SSSPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLSISR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

A0A6J1CHV9 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X21.3e-3593.26Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MAS+GARSVFRSFSGSARRAAA IGS+AR SSSPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLSISR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

A0A6J1CIN8 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X31.3e-3593.26Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MAS+GARSVFRSFSGSARRAAA IGS+AR SSSPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASSSALMTSMLSISR SCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

A0A6J1I155 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X25.6e-3492.22Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSS-SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MASIGARSVFRSFSGSARRAAA IGSQAR SS SPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASS+A+M SMLSISRRSCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSS-SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

A0A6J1I2H5 protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X15.6e-3492.22Show/hide
Query:  MASIGARSVFRSFSGSARRAAAQIGSQARPSS-SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        MASIGARSVFRSFSGSARRAAA IGSQAR SS SPFRMATNKPLSHRTFRCAAEMSFCLES+MPFHSASS+A+M SMLSISRRSCGWLPE
Subjt:  MASIGARSVFRSFSGSARRAAAQIGSQARPSS-SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

SwissProt top hitse value%identityAlignment
Q93ZJ3 Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial7.8e-0946.59Show/hide
Query:  GARSVFRSFSGSARRAAAQIG---SQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE
        GARS+ R  + S+R AAA  G   SQA+ +   FR    +       R   E+SFC+ESL+P+HSA++SALMTS LSIS ++ GWL +
Subjt:  GARSVFRSFSGSARRAAAQIG---SQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPE

Arabidopsis top hitse value%identityAlignment
AT1G28395.1 unknown protein8.5e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL
        ARSVFRS +  A   A +   G +  PSS  + FRM    PL++R FR   E+S C+E+++P+H+A++SAL+ SMLS+SRR  GW+
Subjt:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL

AT1G28395.2 unknown protein8.5e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL
        ARSVFRS +  A   A +   G +  PSS  + FRM    PL++R FR   E+S C+E+++P+H+A++SAL+ SMLS+SRR  GW+
Subjt:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL

AT1G28395.3 unknown protein8.5e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL
        ARSVFRS +  A   A +   G +  PSS  + FRM    PL++R FR   E+S C+E+++P+H+A++SAL+ SMLS+SRR  GW+
Subjt:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL

AT1G28395.4 unknown protein8.5e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL
        ARSVFRS +  A   A +   G +  PSS  + FRM    PL++R FR   E+S C+E+++P+H+A++SAL+ SMLS+SRR  GW+
Subjt:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL

AT1G28395.5 unknown protein8.5e-1146.51Show/hide
Query:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL
        ARSVFRS +  A   A +   G +  PSS  + FRM    PL++R FR   E+S C+E+++P+H+A++SAL+ SMLS+SRR  GW+
Subjt:  ARSVFRSFSGSARRAAAQI--GSQARPSS--SPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCATTGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCCGGCCGTCGAGCTCTCCCTTTCGAAT
GGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGCTGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGA
CTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGTTTTTGGTACTGTTGATTTGTTGTTTTCCCAATTCCTCTACTTCATAAAGATGGGGGTTGCA
AATTCAACAGTATGTGTCTATGTGACTCTGACCATCAAGTATCATGCAAAGGAGTTTGAAGGCGGTGATATCCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCCATTGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCCGGCCGTCGAGCTCTCCCTTTCGAAT
GGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGCTGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGA
CTTCAATGCTCTCTATCTCACGCCGCAGCTGCGGTTGGCTTCCCGAAGTTTTTGGTACTGTTGATTTGTTGTTTTCCCAATTCCTCTACTTCATAAAGATGGGGGTTGCA
AATTCAACAGTATGTGTCTATGTGACTCTGACCATCAAGTATCATGCAAAGGAGTTTGAAGGCGGTGATATCCAATGA
Protein sequenceShow/hide protein sequence
MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPEVFGTVDLLFSQFLYFIKMGVA
NSTVCVYVTLTIKYHAKEFEGGDIQ