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Spg001439 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001439
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold8:45682230..45683658
RNA-Seq ExpressionSpg001439
SyntenySpg001439
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570826.1 hypothetical protein SDJN03_29741, partial [Cucurbita argyrosperma subsp. sororia]7.3e-3393.75Show/hide
Query:  LFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        +F FRS  ENPMT RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  LFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

KAG7010668.1 hypothetical protein SDJN02_27463, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3488.64Show/hide
Query:  RFKVVGAFLFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        +FK + A +F FRS  ENPMT RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RFKVVGAFLFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

XP_008465426.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo]2.9e-2995.65Show/hide
Query:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

XP_022140323.1 uncharacterized protein LOC111011024 [Momordica charantia]1.3e-2997.1Show/hide
Query:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

XP_022944261.1 uncharacterized protein LOC111448766 [Cucurbita moschata]8.3e-29100Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

TrEMBL top hitse value%identityAlignment
A0A1S3CQB9 uncharacterized protein LOC1035030421.4e-2995.65Show/hide
Query:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+IVA GLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

A0A565CU39 Uncharacterized protein2.0e-2880.49Show/hide
Query:  AFLFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        + LF F SQ    M   RNIIVATGL+ FASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQ Y KK
Subjt:  AFLFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

A0A6J1CHR8 uncharacterized protein LOC1110110246.2e-3097.1Show/hide
Query:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

A0A6J1FTX8 uncharacterized protein LOC1114487664.0e-29100Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

A0A6J1JB19 uncharacterized protein LOC1114841571.2e-2898.48Show/hide
Query:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        R+NIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22875.1 unknown protein1.4e-2985.51Show/hide
Query:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RNI+VATGL+ FASAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

AT5G22875.2 unknown protein1.4e-2985.51Show/hide
Query:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RNI+VATGL+ FASAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTACTTGGTGCTCAAAGCATTTCCTTCCTCTGGTCGATTCAAGGTGGTTGGTGCTTTCTTGTTTGCATTCAGATCACAGATAGAAAACCCAATGACACGGCGTCG
GAATATCATCGTTGCCACTGGATTGATTGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCCAAAAAGCCAGTTATAGATCCAGCAAAGCCTCTTC
CACCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGTTCCCGAGACGTCGGACCCGACCATCAAACTTACACCAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCTACTTGGTGCTCAAAGCATTTCCTTCCTCTGGTCGATTCAAGGTGGTTGGTGCTTTCTTGTTTGCATTCAGATCACAGATAGAAAACCCAATGACACGGCGTCG
GAATATCATCGTTGCCACTGGATTGATTGCCTTTGCATCTGCTGGATTAGCATTTCCCTTTTACATGGCGTCTTCCAAAAAGCCAGTTATAGATCCAGCAAAGCCTCTTC
CACCGCAGGCCACTTTTCGAGGTCCTTATATAAACACTGGTTCCCGAGACGTCGGACCCGACCATCAAACTTACACCAAGAAGTGA
Protein sequenceShow/hide protein sequence
MLYLVLKAFPSSGRFKVVGAFLFAFRSQIENPMTRRRNIIVATGLIAFASAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK