; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001561 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001561
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReplication protein A subunit
Genome locationscaffold8:32006151..32010018
RNA-Seq ExpressionSpg001561
SyntenySpg001561
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR013955 - Replication factor A, C-terminal
IPR031657 - Replication protein A, OB domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG5520322.1 hypothetical protein RHGRI_033033 [Rhododendron griersonianum]1.0e-2824.72Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L+P+ R W  KV V+R+  ++ + T KG    + K+I++D++G SIQ  +FN+ I+     F + +TY I +G++KP++ +Y S H + EI LS  +
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENF-CSFESLMVGNSETNTPHI--DVIGGVIQIKPI-VLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQ
         V+E    + ++K + F   F  L   N    +  I  DV+  VI ++P+  + K      S+KR V L+++   +I L LW D+A NEG  LE+    +
Subjt:  DVKEVEGERFNLKKENF-CSFESLMVGNSETNTPHI--DVIGGVIQIKPI-VLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQ

Query:  NVIVITNVKPT------------------------------------------------------------------EFE-------------DYMPTAY
         ++ ++ VK +                                                                  EF+             D M   +
Subjt:  NVIVITNVKPT------------------------------------------------------------------EFE-------------DYMPTAY

Query:  -------------------CTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDK
                           CTKC ++NS    +Y++++ V DGE + YITLF+AA+ I GC+ +++    K+++  Q K  + L  A  K Y F  ++DK
Subjt:  -------------------CTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDK

Query:  AGESDRARKQIVVQEICS-----VISMASKRHKEGEEKRAIETEE
          + DR   +++  E+ +      + + S   ++ + K++I+ E+
Subjt:  AGESDRARKQIVVQEICS-----VISMASKRHKEGEEKRAIETEE

ONK60194.1 uncharacterized protein A4U43_C08F15380 [Asparagus officinalis]5.0e-3633.43Show/hide
Query:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS
        + ++ I ELK +Q+ W+  V V+R  +I  FK  +G+     KLI+ID+EG  IQ  LFN LIEKF  +  K +TY I +G +KP +++Y +I+P+ E++
Subjt:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS

Query:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQ
        L+  + ++E +        K  F SF+   V   +      DV+G VI +KPI          S++REV++M+ +F+ I + LW DLAE EG  LE    
Subjt:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQ

Query:  AQNVIVITNVKPTEFEDYMPTAYCTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLV
        A+ V+ + +V    +                      Y LR+ V+DG + +Y+TLFD A+ ++GC AI Y    +D   E S+ +Q +    +K+Y FLV
Subjt:  AQNVIVITNVKPTEFEDYMPTAYCTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLV

Query:  RMDKAGESDRARKQIVVQEICSVISMASKRHKEGEEKRAIETEENKKRAKVIE
        ++++  ES+R  + I+ QE+         R  E      +ETEE   R KVI+
Subjt:  RMDKAGESDRARKQIVVQEICSVISMASKRHKEGEEKRAIETEENKKRAKVIE

XP_020242959.1 replication protein A 70 kDa DNA-binding subunit B-like [Asparagus officinalis]1.6e-2930Show/hide
Query:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS
        + ++ I ELK +Q+ W+  V V+R  +I  FK  +G+     KLI+ID+EG  IQ  LFN LIEKF  +  K +TY I +G +KP +++Y +I+P+ E++
Subjt:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS

Query:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKP------------IVLRK----------------------------LHD
        L+  + ++E +        K  F SF+   V   +      DV+G VI +KP            I++ K                            L +
Subjt:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKP------------IVLRK----------------------------LHD

Query:  GNFSRKREVLLMDNK----FNTIKLALWDDLAENEGQYLEE-------------NGQAQNVIVITNVKPTEFEDYMPTAYCTKCENENSTFTRKYVLRML
         N    + VLL   K     N +KL    D+     Q  +              N +       T  K    E    TA CT C+N NS +T +Y LR+ 
Subjt:  GNFSRKREVLLMDNK----FNTIKLALWDDLAENEGQYLEE-------------NGQAQNVIVITNVKPTEFEDYMPTAYCTKCENENSTFTRKYVLRML

Query:  VSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDKAGESDRARKQIVVQEICSVISMASKRHKEGEEKRAIETE
        V+DG + +Y+TLFD A+ ++GC AI Y    +D   E S+ +Q +    +K+Y FLV++++  ES+R  + I+ QE+         R  E      +ETE
Subjt:  VSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDKAGESDRARKQIVVQEICSVISMASKRHKEGEEKRAIETE

Query:  ENKKRAKVIE
        E   R KVI+
Subjt:  ENKKRAKVIE

XP_020262698.1 uncharacterized protein LOC109838687 [Asparagus officinalis]7.7e-2924.82Show/hide
Query:  KPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTSDVKE
        K FQR WT  V ++R      ++  KG   K+LKLI  D EGE IQ  +F + IE +  + QK     I +G +KPI+  Y ++H   E++L+K   +KE
Subjt:  KPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTSDVKE

Query:  VEGE-RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVIVITN
         + E +F+    NF S +  +   S  +T +I+V+  +  +KP++           +R+++++D    T+ + L+ DLA NEG  +E       +I +++
Subjt:  VEGE-RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVIVITN

Query:  VKPTEFE------------------------------------------------------DYMPTAY--------------------------------
         K + ++                                                      D M  +                                 
Subjt:  VKPTEFE------------------------------------------------------DYMPTAY--------------------------------

Query:  ----------CTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDKAGESDRARK
                  C  C+  N     +YV++++V D  + + +TLFDAA+ ++GC+A ++ +D+K+ KK QS  FQ  V+   K Y FLV++D+  + +RA+ 
Subjt:  ----------CTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDKAGESDRARK

Query:  QIVVQEI
        +I+ QEI
Subjt:  QIVVQEI

XP_022155232.1 replication protein A 70 kDa DNA-binding subunit E-like [Momordica charantia]9.3e-7565.42Show/hide
Query:  MDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISL
        M+MVI +L+PFQ+GWT  V++VRKF IQ    +KG+PL+++K IV+D +G  IQ+ LFNDLIEKFGD+ +KGKTY I+DG IKPIDVRYM++H K EISL
Subjt:  MDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISL

Query:  SKTSDVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQ
        S+ S VKE+EGE F L K++FC+FES++   S      IDVIGGV+QIKPI+ RK  DGN+S+KREVLLMDNK NTIKL LWDDLAENEGQYLEENG+ Q
Subjt:  SKTSDVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQ

Query:  NVIVITNVKPTEFE
         VI+ITNV+P +FE
Subjt:  NVIVITNVKPTEFE

TrEMBL top hitse value%identityAlignment
A0A1R3L7I6 DUF223 domain-containing protein3.1e-2335.71Show/hide
Query:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS
        + ++VI ELK +Q+ W+  V V+R  +I  FK  +G+     KLI+ID+EG  IQ  L N LIEKF D+  KG+TY I +G +KP +++Y +I+P+ E++
Subjt:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS

Query:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQ
        L+  + ++E +        K  F SF+       +      DV+G V  +KPI          S++RE+++M+ +F+ I + LW DLAE EG  LE    
Subjt:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQ

Query:  AQNVIVITNV
        A+ V+ + +V
Subjt:  AQNVIVITNV

A0A5J4ZI14 REPA_OB_2 domain-containing protein2.1e-2425.14Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L+  Q+ WT +  V+R+  I+ F   + +  K+ K+I+ D  G  IQ  +FN+ I KF  IFQ  K Y+I +G +K  + ++ ++HP  E+ L + +
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGE-RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVI
        +V+E       ++    F  F+ +   + E N P++    G    +  V++K + G  + KRE+ +M+ + +++ + LW D+A NEGQ L+EN   + +I
Subjt:  DVKEVEGE-RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVI

Query:  VITNVKPTEFEDYMPTA--------YCTKCENENSTFTRKYVLRMLVSDGEEESYITLFD-AADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKY
        V++N+  T ++     +        +   CE +     + Y +R+ V DG ++  + LFD     ++GC   +Y N ++ K K +S  ++ +V  +   Y
Subjt:  VITNVKPTEFEDYMPTA--------YCTKCENENSTFTRKYVLRMLVSDGEEESYITLFD-AADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKY

Query:  YFLVRMDKAGESDRARKQIVVQEICSVISMASKRHKEGEEKRAIETEENKK-RAKVIE
         FL   ++   S   +   ++ +   + +  +    +  E    ET++ ++ + K++E
Subjt:  YFLVRMDKAGESDRARKQIVVQEICSVISMASKRHKEGEEKRAIETEENKK-RAKVIE

A0A5J5AEN5 Uncharacterized protein8.9e-2329.86Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L+  Q+ WT +  V+R+  I+ F   + +  K+ K+I++D  G  IQ  +FN+ I KF  IFQ  K Y+I +G +K  + ++ ++HP  E+ L + +
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGE-RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVI
        +V+E       ++    F  F+ +   + E N P++D+ G V  +    + K  +G  + KRE+ +M+ + +++ +  W D+A NEGQ L+EN   + +I
Subjt:  DVKEVEGE-RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVI

Query:  VITNVKPTEFE
        V++N+  T ++
Subjt:  VITNVKPTEFE

A0A5P1FUD9 DUF223 domain-containing protein (Fragment)1.8e-2335.71Show/hide
Query:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS
        + ++ I ELK +Q+ W+  V V+R  +I  FK  +G+     KLI+ID+EG  IQ  LFN LIEKF  +  KG+TY I +G +KP +++Y +I+P+ E++
Subjt:  EMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEIS

Query:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQ
        L+  + ++E +        K  F SF+       +      DV+G V  +KPI          S++REV++M+ +F+ I + LW DLAE EG  LE    
Subjt:  LSKTSDVKEVEG-ERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQ

Query:  AQNVIVITNV
        A+ V+ + +V
Subjt:  AQNVIVITNV

A0A6J1DNS8 replication protein A 70 kDa DNA-binding subunit E-like4.5e-7565.42Show/hide
Query:  MDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISL
        M+MVI +L+PFQ+GWT  V++VRKF IQ    +KG+PL+++K IV+D +G  IQ+ LFNDLIEKFGD+ +KGKTY I+DG IKPIDVRYM++H K EISL
Subjt:  MDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISL

Query:  SKTSDVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQ
        S+ S VKE+EGE F L K++FC+FES++   S      IDVIGGV+QIKPI+ RK  DGN+S+KREVLLMDNK NTIKL LWDDLAENEGQYLEENG+ Q
Subjt:  SKTSDVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQ

Query:  NVIVITNVKPTEFE
         VI+ITNV+P +FE
Subjt:  NVIVITNVKPTEFE

SwissProt top hitse value%identityAlignment
F4JSG3 Replication protein A 70 kDa DNA-binding subunit E1.6e-1627.37Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        ++ L P+   WT K  V  K +++++   +G+  KV    ++D +G  I++T FN + ++F D    G  Y+I  G ++P    +  +   +EI L   S
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE
         +K+   E   + +  F  F ++    S  N   +DVIG V  I P V     +G  + KR + L D    ++++ +W D    EGQ L+
Subjt:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE

Q10Q08 Replication protein A 70 kDa DNA-binding subunit B5.0e-2330.81Show/hide
Query:  LKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTSDVK
        L P+Q  W  KV V  K +++ +K  +G+   V  + + D +G  IQ T+FN+  +KF  +F+ GK Y I  G ++  + ++ ++H  +E++L++ + V+
Subjt:  LKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTSDVK

Query:  EVEGERFNLK-KENFCSFESL--MVGNSETNTPHIDVIGGVIQIKP-IVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVI
        E EGE F  + + NF   + L   VG  E     +DVIG V  + P + +R+  D     KR++++ D+   T+ ++LW+DLA   GQ L +   +  +I
Subjt:  EVEGERFNLK-KENFCSFESL--MVGNSETNTPHIDVIGGVIQIKP-IVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVI

Query:  VITNVKPTEFE
         I ++K ++F+
Subjt:  VITNVKPTEFE

Q6YZ49 Replication protein A 70 kDa DNA-binding subunit A5.8e-1928.42Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        IS L P+Q  W  K  V  K  I+++   KGD  KV    ++D +G  I++T FN L+++F ++ + GK YV+  G ++P    Y  ++ ++EI L   S
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE
         V     E  ++  + F  F  +       N   +D+IG V  + P    +  +G  ++KR + L D    ++++ +W D    EG  L+
Subjt:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE

Q9FHJ6 Replication protein A 70 kDa DNA-binding subunit C3.5e-1629.38Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L P+Q  WT KV V  K  +++F   +G+  K+    ++D +G  I++T FND +++F D    G  Y+I  G +KP    +  +   +EI L   S
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGE----RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE
         ++  E +    R++    N    E+ M  NS T     DVIG V  I P V     +    +KR + L D    ++++ +W +    EGQ L+
Subjt:  DVKEVEGE----RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE

Q9SKI4 Replication protein A 70 kDa DNA-binding subunit A1.0e-2031.41Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L P+Q  W  K  V  K  I+++   KGD  KV    ++D +G  I++T FN L+++F D+ + GK Y+I  G +KP    +  +  ++EI L  TS
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEE
         V+    E  ++ K+ F       + N+E NT  +DVIG V  + P V     +G  + +R + L D     +++ LW +    +G+ LEE
Subjt:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEE

Arabidopsis top hitse value%identityAlignment
AT2G06510.1 replication protein A 1A7.4e-2231.41Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L P+Q  W  K  V  K  I+++   KGD  KV    ++D +G  I++T FN L+++F D+ + GK Y+I  G +KP    +  +  ++EI L  TS
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEE
         V+    E  ++ K+ F       + N+E NT  +DVIG V  + P V     +G  + +R + L D     +++ LW +    +G+ LEE
Subjt:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEE

AT2G06510.2 replication protein A 1A7.4e-2231.41Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L P+Q  W  K  V  K  I+++   KGD  KV    ++D +G  I++T FN L+++F D+ + GK Y+I  G +KP    +  +  ++EI L  TS
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEE
         V+    E  ++ K+ F       + N+E NT  +DVIG V  + P V     +G  + +R + L D     +++ LW +    +G+ LEE
Subjt:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEE

AT4G19130.1 Replication factor-A protein 1-related1.1e-1727.37Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        ++ L P+   WT K  V  K +++++   +G+  KV    ++D +G  I++T FN + ++F D    G  Y+I  G ++P    +  +   +EI L   S
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE
         +K+   E   + +  F  F ++    S  N   +DVIG V  I P V     +G  + KR + L D    ++++ +W D    EGQ L+
Subjt:  DVKEVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE

AT5G45400.1 Replication factor-A protein 1-related2.5e-1729.38Show/hide
Query:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS
        I+ L P+Q  WT KV V  K  +++F   +G+  K+    ++D +G  I++T FND +++F D    G  Y+I  G +KP    +  +   +EI L   S
Subjt:  ISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTS

Query:  DVKEVEGE----RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE
         ++  E +    R++    N    E+ M  NS T     DVIG V  I P V     +    +KR + L D    ++++ +W +    EGQ L+
Subjt:  DVKEVEGE----RFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAGATGGATATGGTTATTAGTGAGCTCAAGCCTTTTCAAAGAGGATGGACCACTAAAGTCAGTGTCGTTAGAAAATTTTCCATCCAGAAATTCAAGACCAAAAA
AGGAGATCCACTCAAGGTTCTAAAATTAATAGTAATTGATAAGGAGGGAGAGAGTATTCAGATTACTTTGTTCAATGACCTAATCGAAAAATTTGGAGATATTTTTCAAA
AGGGAAAAACATATGTGATCCATGATGGTATCATCAAACCAATTGACGTCAGATACATGAGCATTCATCCAAAATTTGAGATTTCATTATCCAAAACCAGTGACGTGAAA
GAGGTTGAGGGAGAAAGATTTAATTTGAAGAAGGAAAATTTTTGCAGCTTTGAATCATTGATGGTCGGTAATAGCGAAACAAATACTCCCCATATAGATGTCATAGGTGG
AGTGATACAGATAAAACCCATAGTTTTAAGAAAACTACACGATGGCAATTTTTCCAGAAAAAGGGAAGTTCTACTTATGGACAATAAGTTTAATACAATAAAATTGGCAT
TATGGGACGATTTAGCTGAAAATGAAGGACAATATCTGGAGGAAAATGGACAAGCACAAAATGTTATTGTAATCACCAATGTAAAGCCTACTGAATTTGAAGACTATATG
CCAACAGCATATTGTACAAAATGTGAGAATGAAAATTCTACATTTACAAGAAAATATGTGTTGAGAATGCTTGTATCTGATGGTGAAGAGGAAAGCTACATAACTCTTTT
TGATGCTGCTGATTACATAGTTGGATGCAATGCAATCGAATATTTCAATGATCTCAAGGATAAGAAAAAAGAACAAAGTAAGCATTTCCAGAATTTGGTGATAGCAGAAG
ATAAGAAATACTACTTCTTAGTCAGAATGGACAAAGCAGGAGAGAGTGATCGTGCACGTAAACAAATAGTTGTTCAAGAAATTTGCAGTGTCATTTCGATGGCTAGCAAA
AGACACAAAGAAGGTGAAGAAAAGAGAGCGATTGAAACAGAAGAGAACAAAAAAAGAGCAAAAGTAATAGAAATGAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAGATGGATATGGTTATTAGTGAGCTCAAGCCTTTTCAAAGAGGATGGACCACTAAAGTCAGTGTCGTTAGAAAATTTTCCATCCAGAAATTCAAGACCAAAAA
AGGAGATCCACTCAAGGTTCTAAAATTAATAGTAATTGATAAGGAGGGAGAGAGTATTCAGATTACTTTGTTCAATGACCTAATCGAAAAATTTGGAGATATTTTTCAAA
AGGGAAAAACATATGTGATCCATGATGGTATCATCAAACCAATTGACGTCAGATACATGAGCATTCATCCAAAATTTGAGATTTCATTATCCAAAACCAGTGACGTGAAA
GAGGTTGAGGGAGAAAGATTTAATTTGAAGAAGGAAAATTTTTGCAGCTTTGAATCATTGATGGTCGGTAATAGCGAAACAAATACTCCCCATATAGATGTCATAGGTGG
AGTGATACAGATAAAACCCATAGTTTTAAGAAAACTACACGATGGCAATTTTTCCAGAAAAAGGGAAGTTCTACTTATGGACAATAAGTTTAATACAATAAAATTGGCAT
TATGGGACGATTTAGCTGAAAATGAAGGACAATATCTGGAGGAAAATGGACAAGCACAAAATGTTATTGTAATCACCAATGTAAAGCCTACTGAATTTGAAGACTATATG
CCAACAGCATATTGTACAAAATGTGAGAATGAAAATTCTACATTTACAAGAAAATATGTGTTGAGAATGCTTGTATCTGATGGTGAAGAGGAAAGCTACATAACTCTTTT
TGATGCTGCTGATTACATAGTTGGATGCAATGCAATCGAATATTTCAATGATCTCAAGGATAAGAAAAAAGAACAAAGTAAGCATTTCCAGAATTTGGTGATAGCAGAAG
ATAAGAAATACTACTTCTTAGTCAGAATGGACAAAGCAGGAGAGAGTGATCGTGCACGTAAACAAATAGTTGTTCAAGAAATTTGCAGTGTCATTTCGATGGCTAGCAAA
AGACACAAAGAAGGTGAAGAAAAGAGAGCGATTGAAACAGAAGAGAACAAAAAAAGAGCAAAAGTAATAGAAATGAATTAA
Protein sequenceShow/hide protein sequence
MAEMDMVISELKPFQRGWTTKVSVVRKFSIQKFKTKKGDPLKVLKLIVIDKEGESIQITLFNDLIEKFGDIFQKGKTYVIHDGIIKPIDVRYMSIHPKFEISLSKTSDVK
EVEGERFNLKKENFCSFESLMVGNSETNTPHIDVIGGVIQIKPIVLRKLHDGNFSRKREVLLMDNKFNTIKLALWDDLAENEGQYLEENGQAQNVIVITNVKPTEFEDYM
PTAYCTKCENENSTFTRKYVLRMLVSDGEEESYITLFDAADYIVGCNAIEYFNDLKDKKKEQSKHFQNLVIAEDKKYYFLVRMDKAGESDRARKQIVVQEICSVISMASK
RHKEGEEKRAIETEENKKRAKVIEMN