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Spg001595 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001595
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag-pol protein
Genome locationscaffold8:32641111..32643465
RNA-Seq ExpressionSpg001595
SyntenySpg001595
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PIN02048.1 hypothetical protein CDL12_25440 [Handroanthus impetiginosus]5.4e-1032.17Show/hide
Query:  LVRGHTVAFAPACINSVFELLDMSDAE-GNALLTCQDDDFLRTVLVAVARPGFE-------ATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLD
        LVRGH V F    IN  + +  +  AE  N      D D L   L       F+       A  W+ +I  R++PTSH G +   R +L+YCI+ G  +D
Subjt:  LVRGHTVAFAPACINSVFELLDMSDAE-GNALLTCQDDDFLRTVLVAVARPGFE-------ATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLD

Query:  LGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEEI
        +G+IIS+++ Q+    +  ++ L L+T LC  +G+    +EE+
Subjt:  LGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEEI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.0e-0931.03Show/hide
Query:  NEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNIPR
        N V VRG  V+++   IN+VF L D  D     +    + D + TVL  VA  G E                   A  W H++K+ ++PT+H  T++  R
Subjt:  NEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNIPR

Query:  VVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR
        ++L++ ++ G ++++GR+I   +R   A+  GA+F   L+T LCR
Subjt:  VVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.4e-1031.97Show/hide
Query:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI
        E N V VRG  V+++   IN+VF L D  D     +      D + TVL  VA  G E                   A  W H++K+R++PT+H  T++ 
Subjt:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI

Query:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR
         R++L++ ++ G ++++GR+I   +R   A+  GA+F   L+T LCR
Subjt:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.6e-0929.61Show/hide
Query:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI
        E N + VRG  V+++   IN+VF L D  D     +    + + + TVL  VA  G E                   A  W H++K+R++PT+H   ++ 
Subjt:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI

Query:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLL
         R++L++ ++ G ++++GR+I   +R   A+  GA+F   L+T LCR +  L
Subjt:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLL

WP_157056316.1 hypothetical protein [Candidatus Burkholderia verschuerenii]3.3e-0728.07Show/hide
Query:  EEINEVLVRGHTVAFAPACINSVFEL------LDMSDAEGNAL---LTCQDDDFLRTVLVAVARPGFEATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCI
        E+  E+ + GHTV F+   IN+ F+L       DM   +   +   LT Q+        +  +    +A    H+++ R+MPTS +  +   R  L+Y I
Subjt:  EEINEVLVRGHTVAFAPACINSVFEL------LDMSDAEGNAL---LTCQDDDFLRTVLVAVARPGFEATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCI

Query:  IKGITLDLGRIISEAL--RQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEE--IRPMRKDFDDQWQQEMPLRLKHQRGKGEKQTAGRNPPLAAMNTQPDP
          G+ +D+GR+IS+ +     T+K K ++    L+T +C  +G+ P  D    I+ M     +  +   P  L+H+           +PP       P P
Subjt:  IKGITLDLGRIISEAL--RQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEE--IRPMRKDFDDQWQQEMPLRLKHQRGKGEKQTAGRNPPLAAMNTQPDP

Query:  PAQENTVCAPNQESLSPPPPPPSPPVPQ
        P        P+ ++L PPPPPPSPP  Q
Subjt:  PAQENTVCAPNQESLSPPPPPPSPPVPQ

TrEMBL top hitse value%identityAlignment
A0A2G9FVU6 Uncharacterized protein2.1e-0729.38Show/hide
Query:  KRKGPWPHQK--EKKKWEKRRATLQKNGGSWQEEINEVLVRGHTVAFAPACINSVFE---LLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFEATTWMH
        K +G   H++   ++ WE   A  +   G+     N VLVRG TV F+ + IN +F+   + + +D E         +     V +  +    EA  W+ 
Subjt:  KRKGPWPHQK--EKKKWEKRRATLQKNGGSWQEEINEVLVRGHTVAFAPACINSVFE---LLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFEATTWMH

Query:  WIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLDLGRIISEA-LRQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEEI
        +I  R+ P+SH   ++  R +L+Y I+ G+ LD+GR I+ A L+        +M+   LVT LC+  GL+  P +E+
Subjt:  WIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLDLGRIISEA-LRQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEEI

A0A2G9G9R6 Uncharacterized protein2.6e-1032.17Show/hide
Query:  LVRGHTVAFAPACINSVFELLDMSDAE-GNALLTCQDDDFLRTVLVAVARPGFE-------ATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLD
        LVRGH V F    IN  + +  +  AE  N      D D L   L       F+       A  W+ +I  R++PTSH G +   R +L+YCI+ G  +D
Subjt:  LVRGHTVAFAPACINSVFELLDMSDAE-GNALLTCQDDDFLRTVLVAVARPGFE-------ATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLD

Query:  LGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEEI
        +G+IIS+++ Q+    +  ++ L L+T LC  +G+    +EE+
Subjt:  LGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLLPTPDEEI

A0A2P5AGA5 Uncharacterized protein (Fragment)9.9e-1031.03Show/hide
Query:  NEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNIPR
        N V VRG  V+++   IN+VF L D  D     +    + D + TVL  VA  G E                   A  W H++K+ ++PT+H  T++  R
Subjt:  NEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNIPR

Query:  VVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR
        ++L++ ++ G ++++GR+I   +R   A+  GA+F   L+T LCR
Subjt:  VVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR

A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-1031.97Show/hide
Query:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI
        E N V VRG  V+++   IN+VF L D  D     +      D + TVL  VA  G E                   A  W H++K+R++PT+H  T++ 
Subjt:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI

Query:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR
         R++L++ ++ G ++++GR+I   +R   A+  GA+F   L+T LCR
Subjt:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCR

A0A2P5DXM3 Uncharacterized protein7.6e-1029.61Show/hide
Query:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI
        E N + VRG  V+++   IN+VF L D  D     +    + + + TVL  VA  G E                   A  W H++K+R++PT+H   ++ 
Subjt:  EINEVLVRGHTVAFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFE-------------------ATTWMHWIKNRIMPTSHDGTLNI

Query:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLL
         R++L++ ++ G ++++GR+I   +R   A+  GA+F   L+T LCR +  L
Subjt:  PRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGLVTCLCRASGLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGATTCACAAAACCTTTCAATCGCCGGCTACGCAAACGACACACCACCTTCATCGTCGGAGGTTGAAGGACCCAACAGGGACATCGTCATTTCCTCTGACGAGGA
AAACGACAACAAAAACCAAGGCGAATTCATGGAGGAAGAAGAACCCGAAGTGATTGAGGAAGAGCGGCCCGGTGAAACCACCCAACTACAGCCCGCCGTCGCGCCGTCCA
CCTCCGGAAACAATGCCACGAAAGTGCTCTACTTAGCACCTTTGGCCACATCCTCTTACAACATCCAGCGAGTAAGCCTCCAACCAGCCCAAAACCTCCTCGCCCCACGA
AACCTAACCCCATTTTCTTCCCCCTTTCCGTTTATATCTCTTCTTCCACCACCAGACTCTTCGGCCAACCTCACCTCAAACCCTTCCCCATCATTTTCCTCCACTCCTAT
AGCCGTTTCAAATCCCCTCCCACCTTCAACCTCCACAAACCCCACTTTACCGCAGTTTTCTAAGCGTGAAGTGGCCGCATGGGACTCCCTACTGGGGGAGTTGGGCGAAG
AAGGTGAAGCAATTCGCCAAAGAGAAGAAAAAGAAAAAGTTGCAGAAAAGGAAGCTGCCCGCAAGGCCACCGTAGAAGAAGAAGCGGTTAGAGAAAAAGAACGCACCTGC
AAGGCAGCGCAAGATCGAGCTGCGGCAGAAGTCTCCAAAGCAAGTCTGGCTGCAATTGCGGCAGCCCTTGGCTCACCAACGCAAGGGTCAGAATCAACGGATTCAGAAGA
TGGCCTACCCCTAACCCATCGCCGCAACGTCCAACCTACTGGGGTAACCATCCAAGAGCCCTCAGAGAGACCTGCGGCAGGCCCAAGCAAAAAGAGGAAGGGGCCCTGGC
CGCATCAAAAGGAAAAGAAAAAGTGGGAGAAGAGAAGAGCCACTTTGCAGAAGAACGGGGGTTCATGGCAGGAAGAGATTAATGAAGTGTTGGTGCGTGGCCACACAGTC
GCTTTTGCCCCTGCGTGCATCAACTCCGTGTTCGAGCTACTAGACATGTCAGACGCAGAGGGTAATGCGTTGTTGACCTGCCAGGACGACGACTTCCTGAGAACAGTTCT
CGTTGCGGTGGCCAGACCAGGTTTTGAGGCCACAACTTGGATGCATTGGATAAAGAACCGCATCATGCCCACATCGCATGATGGCACGCTAAACATCCCAAGGGTGGTCC
TGGTCTACTGTATAATAAAGGGGATCACCCTTGACTTGGGCAGAATCATCTCAGAAGCCCTGCGCCAAACTACTGCAAAACCAAAAGGTGCAATGTTCTGCCTTGGCCTT
GTTACCTGCCTCTGTCGCGCATCCGGCCTGCTGCCAACACCAGACGAAGAAATTCGACCCATGCGGAAGGACTTTGATGATCAATGGCAACAGGAAATGCCCCTGCGCCT
GAAGCACCAAAGAGGAAAAGGCGAAAAACAAACTGCAGGTCGCAATCCTCCTCTGGCAGCAATGAATACTCAGCCAGATCCACCGGCACAGGAAAACACTGTCTGCGCCC
CAAATCAAGAATCCTTGTCGCCACCACCGCCACCGCCGTCACCGCCTGTCCCCCAGTCAACACCTTCCATCCAGAGCGTTGAGGCCATGCATCAAGTAGAGGTCCACGAG
ACCCCGTCGCCTGACCCTCCCCGCAGAAAAGAAAGCCCCCCGCCAAGCTCTCAGCCACAGTCCACACCATCTACCAGCGCATCCCATGGTATGCCTGTTCTGCAACTTTA
TGTGGAAACGACCCTCATCTTCTCGGAGTTAAGGCAGATGGTCCACGAAGTCGCGGAGCCCCTGCGCAAGCAGCAGGAAGAGTTGTGCCAACAACAGGAAGCGATGCGCA
AGAAGCAAGAAGAATTATCTCAGCGCGTCAATGCATTAGTACTCTTCCTGCTGCGTTGGACTGATTCTTTCGGTCATCTGCCAGTCACGCCAAATCTTTTCGTTCAGCCG
CCTGCGCAACCTAGACCTGATGGCGCAGGCCCATCTCAAACGCACGACCCCATGGCTCCACCTGCGCCGAGACAATTCAGGCCGCCGCCTCCACCACCACCACAACAGTA
A
mRNA sequenceShow/hide mRNA sequence
ATGTCTGATTCACAAAACCTTTCAATCGCCGGCTACGCAAACGACACACCACCTTCATCGTCGGAGGTTGAAGGACCCAACAGGGACATCGTCATTTCCTCTGACGAGGA
AAACGACAACAAAAACCAAGGCGAATTCATGGAGGAAGAAGAACCCGAAGTGATTGAGGAAGAGCGGCCCGGTGAAACCACCCAACTACAGCCCGCCGTCGCGCCGTCCA
CCTCCGGAAACAATGCCACGAAAGTGCTCTACTTAGCACCTTTGGCCACATCCTCTTACAACATCCAGCGAGTAAGCCTCCAACCAGCCCAAAACCTCCTCGCCCCACGA
AACCTAACCCCATTTTCTTCCCCCTTTCCGTTTATATCTCTTCTTCCACCACCAGACTCTTCGGCCAACCTCACCTCAAACCCTTCCCCATCATTTTCCTCCACTCCTAT
AGCCGTTTCAAATCCCCTCCCACCTTCAACCTCCACAAACCCCACTTTACCGCAGTTTTCTAAGCGTGAAGTGGCCGCATGGGACTCCCTACTGGGGGAGTTGGGCGAAG
AAGGTGAAGCAATTCGCCAAAGAGAAGAAAAAGAAAAAGTTGCAGAAAAGGAAGCTGCCCGCAAGGCCACCGTAGAAGAAGAAGCGGTTAGAGAAAAAGAACGCACCTGC
AAGGCAGCGCAAGATCGAGCTGCGGCAGAAGTCTCCAAAGCAAGTCTGGCTGCAATTGCGGCAGCCCTTGGCTCACCAACGCAAGGGTCAGAATCAACGGATTCAGAAGA
TGGCCTACCCCTAACCCATCGCCGCAACGTCCAACCTACTGGGGTAACCATCCAAGAGCCCTCAGAGAGACCTGCGGCAGGCCCAAGCAAAAAGAGGAAGGGGCCCTGGC
CGCATCAAAAGGAAAAGAAAAAGTGGGAGAAGAGAAGAGCCACTTTGCAGAAGAACGGGGGTTCATGGCAGGAAGAGATTAATGAAGTGTTGGTGCGTGGCCACACAGTC
GCTTTTGCCCCTGCGTGCATCAACTCCGTGTTCGAGCTACTAGACATGTCAGACGCAGAGGGTAATGCGTTGTTGACCTGCCAGGACGACGACTTCCTGAGAACAGTTCT
CGTTGCGGTGGCCAGACCAGGTTTTGAGGCCACAACTTGGATGCATTGGATAAAGAACCGCATCATGCCCACATCGCATGATGGCACGCTAAACATCCCAAGGGTGGTCC
TGGTCTACTGTATAATAAAGGGGATCACCCTTGACTTGGGCAGAATCATCTCAGAAGCCCTGCGCCAAACTACTGCAAAACCAAAAGGTGCAATGTTCTGCCTTGGCCTT
GTTACCTGCCTCTGTCGCGCATCCGGCCTGCTGCCAACACCAGACGAAGAAATTCGACCCATGCGGAAGGACTTTGATGATCAATGGCAACAGGAAATGCCCCTGCGCCT
GAAGCACCAAAGAGGAAAAGGCGAAAAACAAACTGCAGGTCGCAATCCTCCTCTGGCAGCAATGAATACTCAGCCAGATCCACCGGCACAGGAAAACACTGTCTGCGCCC
CAAATCAAGAATCCTTGTCGCCACCACCGCCACCGCCGTCACCGCCTGTCCCCCAGTCAACACCTTCCATCCAGAGCGTTGAGGCCATGCATCAAGTAGAGGTCCACGAG
ACCCCGTCGCCTGACCCTCCCCGCAGAAAAGAAAGCCCCCCGCCAAGCTCTCAGCCACAGTCCACACCATCTACCAGCGCATCCCATGGTATGCCTGTTCTGCAACTTTA
TGTGGAAACGACCCTCATCTTCTCGGAGTTAAGGCAGATGGTCCACGAAGTCGCGGAGCCCCTGCGCAAGCAGCAGGAAGAGTTGTGCCAACAACAGGAAGCGATGCGCA
AGAAGCAAGAAGAATTATCTCAGCGCGTCAATGCATTAGTACTCTTCCTGCTGCGTTGGACTGATTCTTTCGGTCATCTGCCAGTCACGCCAAATCTTTTCGTTCAGCCG
CCTGCGCAACCTAGACCTGATGGCGCAGGCCCATCTCAAACGCACGACCCCATGGCTCCACCTGCGCCGAGACAATTCAGGCCGCCGCCTCCACCACCACCACAACAGTA
A
Protein sequenceShow/hide protein sequence
MSDSQNLSIAGYANDTPPSSSEVEGPNRDIVISSDEENDNKNQGEFMEEEEPEVIEEERPGETTQLQPAVAPSTSGNNATKVLYLAPLATSSYNIQRVSLQPAQNLLAPR
NLTPFSSPFPFISLLPPPDSSANLTSNPSPSFSSTPIAVSNPLPPSTSTNPTLPQFSKREVAAWDSLLGELGEEGEAIRQREEKEKVAEKEAARKATVEEEAVREKERTC
KAAQDRAAAEVSKASLAAIAAALGSPTQGSESTDSEDGLPLTHRRNVQPTGVTIQEPSERPAAGPSKKRKGPWPHQKEKKKWEKRRATLQKNGGSWQEEINEVLVRGHTV
AFAPACINSVFELLDMSDAEGNALLTCQDDDFLRTVLVAVARPGFEATTWMHWIKNRIMPTSHDGTLNIPRVVLVYCIIKGITLDLGRIISEALRQTTAKPKGAMFCLGL
VTCLCRASGLLPTPDEEIRPMRKDFDDQWQQEMPLRLKHQRGKGEKQTAGRNPPLAAMNTQPDPPAQENTVCAPNQESLSPPPPPPSPPVPQSTPSIQSVEAMHQVEVHE
TPSPDPPRRKESPPPSSQPQSTPSTSASHGMPVLQLYVETTLIFSELRQMVHEVAEPLRKQQEELCQQQEAMRKKQEELSQRVNALVLFLLRWTDSFGHLPVTPNLFVQP
PAQPRPDGAGPSQTHDPMAPPAPRQFRPPPPPPPQQ