CuGenDBv2

Gene ID	Spg001605
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Mitochondrial ribosomal protein L37
Genome location	scaffold10:1538356..1542448
RNA-Seq Expression	Spg001605
Synteny	Spg001605
Gene Ontology terms	GO:0005762 - mitochondrial large ribosomal subunit (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR013870 - Ribosomal protein L37, mitochondrial

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008442187.1 PREDICTED: 54S ribosomal protein L37, mitochondrial isoform X2 [Cucumis melo]

5.8e-54

85.71

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Query:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR
        M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR

Query:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK
        R+N ++LPY DL+RFVKLD RARIKENNSIKAK
Subjt:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK

XP_016899597.1 PREDICTED: 39S ribosomal protein L54, mitochondrial isoform X1 [Cucumis melo]

5.8e-54

85.71

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Query:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR
        M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR

Query:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK
        R+N ++LPY DL+RFVKLD RARIKENNSIKAK
Subjt:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK

XP_022989738.1 54S ribosomal protein L37, mitochondrial-like [Cucurbita maxima]

1.4e-55

89.47

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Query:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR
        MAMSQIRLFRRSL+NTKDLI+LT+VRTFAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYPDWLW LIDK PALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR

Query:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        ++  TLPYEDLKRFVKLD RARIKENNS KAKN
Subjt:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

XP_038883606.1 39S ribosomal protein L54, mitochondrial isoform X1 [Benincasa hispida]

1.1e-57

90.23

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Query:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR
        M MSQIRLFRRS+VN+KDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKAS LSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR

Query:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        +NV+TLPY DLKRFVKLD RA+IKENNS KAKN
Subjt:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

XP_038883607.1 54S ribosomal protein L37, mitochondrial isoform X2 [Benincasa hispida]

1.1e-57

90.23

Show/hide

Query:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR
        M MSQIRLFRRS+VN+KDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKAS LSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR

Query:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        +NV+TLPY DLKRFVKLD RA+IKENNS KAKN
Subjt:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B544 54S ribosomal protein L37, mitochondrial isoform X2

2.8e-54

85.71

Show/hide

Query:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR
        M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR

Query:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK
        R+N ++LPY DL+RFVKLD RARIKENNSIKAK
Subjt:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK

A0A1S4DUD4 39S ribosomal protein L54, mitochondrial isoform X1

2.8e-54

85.71

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Query:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR
        M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR

Query:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK
        R+N ++LPY DL+RFVKLD RARIKENNSIKAK
Subjt:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK

A0A5D3CXE8 39S ribosomal protein L54

2.8e-54

85.71

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Query:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR
        M +SQIR FRR+ +V++KDLIQLTSVR+FAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYP WLWHL+DKHP LSELR
Subjt:  MAMSQIRLFRRS-LVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELR

Query:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK
        R+N ++LPY DL+RFVKLD RARIKENNSIKAK
Subjt:  RRNVDTLPYEDLKRFVKLDNRARIKENNSIKAK

A0A6J1DJG1 54S ribosomal protein L37, mitochondrial-like

4.8e-54

87.22

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Query:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR
        MAMSQ RLF RS++N KD I++TSVRTFAAGGK KKGSKGGAAAD PKASILSKEVKS+TVVGANILKEGADPK+MADSEYPDWLW LIDKHPALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR

Query:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        +NV+ LPYEDLKRFVKLDNRA IKENNSIKAKN
Subjt:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

A0A6J1JQ61 54S ribosomal protein L37, mitochondrial-like

6.6e-56

89.47

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Query:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR
        MAMSQIRLFRRSL+NTKDLI+LT+VRTFAAGGK KKGSKGGAA DAPKASILSKEVKSTTVVGANILKEGADPK+MADSEYPDWLW LIDK PALSELRR
Subjt:  MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRR

Query:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        ++  TLPYEDLKRFVKLD RARIKENNS KAKN
Subjt:  RNVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

SwissProt top hits

e value

%identity

Alignment

Q9CPW3 39S ribosomal protein L54, mitochondrial

4.4e-04

47.27

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Query:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPDWLWHL
        KG KGG AA+A K   + +   + TT  +G NI KEG D  + ADSEYP WL+ +
Subjt:  KGSKGGAAADAPK-ASILSKEVKSTT-VVGANILKEGADPKIMADSEYPDWLWHL

Arabidopsis top hits

e value

%identity

Alignment

AT3G01740.1 Mitochondrial ribosomal protein L37

5.8e-44

68.94

Show/hide

Query:  MSQIRLFRRSLVNTKDLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRR
        M++I L R S  ++KD+++    RTF AA  K+KKG KGG A+DAPK S L+KE+KSTTVVGAN LK+G+DPKI+ DS+YPDWLWHL+DK PALSELRR+
Subjt:  MSQIRLFRRSLVNTKDLIQLTSVRTF-AAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRR

Query:  NVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        NV+TLPY+DLKRFVKLD R +IKENNSIKAKN
Subjt:  NVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

AT5G14290.1 Mitochondrial ribosomal protein L37

1.5e-39

62.88

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Query:  MSQIRLFRRSLVNTKDLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRR
        M+ IR+F  S+  +KD+++    RTFA A GK+KK  +G    DAPKAS LSKE+KS+ VV AN LK+G DPKI+ +S++PD+LWHL+DK PALSELRR+
Subjt:  MSQIRLFRRSLVNTKDLIQLTSVRTFA-AGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRR

Query:  NVDTLPYEDLKRFVKLDNRARIKENNSIKAKN
        NV+TL ++DLKRFVKLD RARIKEN+SIKAKN
Subjt:  NVDTLPYEDLKRFVKLDNRARIKENNSIKAKN

Sequences

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CDS sequence

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ATGGCTATGAGCCAAATTAGATTGTTTAGAAGAAGCCTTGTCAATACCAAAGATCTAATTCAACTGACATCTGTGCGAACATTTGCTGCTGGAGGCAAATCAAAGAAGGG
CTCTAAAGGGGGTGCGGCTGCTGATGCTCCTAAAGCATCAATTCTGAGTAAAGAGGTCAAGTCTACCACTGTAGTTGGTGCCAATATTCTCAAGGAAGGTGCAGATCCAA
AAATTATGGCAGACTCAGAGTACCCTGATTGGCTGTGGCATCTGATCGATAAACATCCAGCTCTGAGTGAATTACGAAGGAGGAATGTCGATACCCTTCCCTACGAGGAT
CTCAAACGCTTCGTTAAATTGGATAACCGAGCAAGGATTAAGGAAAACAACTCCATTAAGGCCAAGAACTGA

mRNA sequence

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Protein sequence

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MAMSQIRLFRRSLVNTKDLIQLTSVRTFAAGGKSKKGSKGGAAADAPKASILSKEVKSTTVVGANILKEGADPKIMADSEYPDWLWHLIDKHPALSELRRRNVDTLPYED
LKRFVKLDNRARIKENNSIKAKN

Spg001605 (gene) of Sponge gourd (cylindrica) v1 genome