| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6605170.1 RNA polymerase sigma factor sigA, partial [Cucurbita argyrosperma subsp. sororia] | 4.3e-267 | 94.69 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE K RLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_016902935.1 PREDICTED: RNA polymerase sigma factor sigA [Cucumis melo] | 1.0e-268 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAK SANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPW+ NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE K RLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| XP_023006851.1 RNA polymerase sigma factor sigA-like [Cucurbita maxima] | 6.2e-266 | 94.29 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE K RLKERL C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_023533104.1 RNA polymerase sigma factor sigA-like [Cucurbita pepo subsp. pepo] | 7.4e-267 | 94.49 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRR+SSKRKIQSKHVF+AQPKISKQL+P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE K RLKERL CEPSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| XP_038902049.1 RNA polymerase sigma factor sigA [Benincasa hispida] | 5.6e-275 | 97.64 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYA-NDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMATAAIIGLGAAKRLLNSSSYYSDFTEK+LY NDHRLGQ+QVSPTKSVVIAK SANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPW+HNTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYA-NDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EE DLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEERK RLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAMLLKH
Subjt: KMEAMLLKH
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A1S4E4N5 RNA polymerase sigma factor sigA | 5.0e-269 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAK SANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPW+ NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE K RLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A5D3BME8 RNA polymerase sigma factor sigA | 5.0e-269 | 95.68 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
MMAT AIIGLGAAKRLLNSSSYYSDFTEK+LYAND+RLGQ+QVSPTKSVVIAK SANFSPSYP SNRHS QCIKAVKEHV+TPSSPTAEPW+ NTTIWED
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHS-QCIKAVKEHVDTPSSPTAEPWIHNTTIWED
Query: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PR KT KKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Subjt: EETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKG
Query: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
L+SEELLSHAEVVRLSKKIKVGLALEE K RLKERLGCEPSEDQLAISLKISRAELRSR+MECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Subjt: LVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL
Query: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Subjt: IGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDRE
Query: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
AFPSLNGLPGETHHSYIADN LENNPWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Subjt: AFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTR
Query: KMEAMLLKH
KMEAML+KH
Subjt: KMEAMLLKH
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| A0A6J1D604 RNA polymerase sigma factor sigA | 8.8e-266 | 94.29 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDF EK+LYANDHRLGQSQVSPTKSVVIAK SANFSPS+PSSNRH+QCIKAVKEHVDTPSSPT EPW+ N+T WEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
E DLKCTVEALLLLQKSMLEKQWNLSFEQTV TDA RG+T+KKVPVTCSGVSARQRR+SSKRKIQSK+ FM QPKISKQLR TISPELLQ RLKGYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEELLSHAEVVRLSKKIKVGLALEERK RLKERLGCEPSEDQLAISLKISR ELRSRV+ECSLA+EKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADN LEN+PWHGTDTWILKAEVNKLIN+TLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1G739 RNA polymerase sigma factor sigA-like | 3.7e-264 | 93.7 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TKSVVIAK SA+FSPSYP SNRH QCIKAVKEHVDTPSSPTAEPW++NTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTD PRGKTEKKVPVTCSGVSARQRR++SKRKIQSKHVFMAQPKISKQ +P+ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE K RLKERL CEPSE+QLAISL+IS AELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTW LK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| A0A6J1KWY7 RNA polymerase sigma factor sigA-like | 3.0e-266 | 94.29 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLY NDHRLGQ+QVS TK VVIAK SA+FSPSY SNRH QCIKAVKEHVDTPSSPTAEPW+HNTTIWEDE
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWEDE
Query: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRR+SSKRKIQSKHVFMAQPKISKQL+P ISPELLQNRL+GYVKGL
Subjt: ETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKTEKKVPVTCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGL
Query: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
VSEE+L H+EVVRLSKKIKVGLALEE K RLKERL C+PSE+QLAISL+ISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Subjt: VSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLI
Query: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKV+LQEKGITPS+DRIAESLNMSKKKVKNATEAISKVFSLDREA
Subjt: GLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILK EVNKLIN+TL DREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAK RK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAAKTRK
Query: MEAMLLKH
MEAMLLKH
Subjt: MEAMLLKH
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| SwissProt top hits | e value | %identity | Alignment |
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| O22056 RNA polymerase sigma factor sigB | 9.3e-39 | 35.81 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE + L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNKLINLTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
+ N P E IAD + D I ++ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNKLINLTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
Query: KTRKMEAMLL
+ ++ L+
Subjt: KTRKMEAMLL
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| O24629 RNA polymerase sigma factor sigA | 6.6e-194 | 70.35 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PW+ N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRRI +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKTRKMEAMLLKH
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| P26683 RNA polymerase sigma factor SigA | 8.4e-40 | 34.24 | Show/hide |
Query: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMS
K +K R T S + ++ ++ Y++ + LL E + L++KI L LE + RL E+L +P + + A ++++ R R+ A++K+ S
Subjt: KISKQLRPTISPE--LLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMS
Query: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
N+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: NVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLDR
Query: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-E
IA + M+ +K+ K+A IS + +E L GET ++ N +L+ ++ K+++ +L RER+++RL +GLD+
Subjt: IAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-E
Query: CLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: CLTWEEISKRIGLSRERVRQVGLVALEKLK
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| P38023 RNA polymerase sigma factor SigA1 | 1.4e-39 | 34.44 | Show/hide |
Query: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAM
A K ++R T + ++ ++ Y++ + LL E + L+++I LALE + L E+L PS+ + A ++ E R R+ A++K+
Subjt: AQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAM
Query: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
SN+RLV+SIA++Y N G DL+Q G +GL+R EKFD KG+K STY WWIRQ ++RA+ + SRT+RLP HL+E + I + K+ QE G P+ +
Subjt: SNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLI-RNAKVRLQEKGITPSLD
Query: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-
IA + M+ +K+ K+A IS + +E L GET +A N +L+ ++ +++ TL RER+++RL +GLD+
Subjt: RIAESLNMSKKKV----KNATEAISKVFSLDREAFPSLNGL---PGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDN-
Query: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
T EEI + ++RER+RQ+ AL KL+
Subjt: ECLTWEEISKRIGLSRERVRQVGLVALEKLK
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| Q0J7T6 RNA polymerase sigma factor sigA | 1.1e-129 | 51.04 | Show/hide |
Query: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYP---------------SSNRHSQCIKAVKEHVD-----
M AT A+IGL A RLL++S F L + LG + +F+P P S + +Q ++A++ H
Subjt: MMATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYP---------------SSNRHSQCIKAVKEHVD-----
Query: TPSSPTAEPWIHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRISSKRKIQSKHVFMAQP
P P P + DL+ ++EA++LLQ+SMLEKQW L F+ + T K V V S VSARQRR+S +R+ ++K
Subjt: TPSSPTAEPWIHNTTIWEDEETDLKCTVEALLLLQKSMLEKQWNLSFE-----QTVSTDAPRGKTEK-KVPVTCSGVSARQRRISSKRKIQSKHVFMAQP
Query: KISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
+ +SPEL+Q+R + Y++G VS+ELL+H +VV LS KIK G+ L++++ +LKE+LG EPS QLA SLKIS ELRSR+ E LARE L MSN+
Subjt: KISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNV
Query: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
RLV+SIAQ+YDN+G E+ADL+QGGLIGLLRGIEKFD+S+GF+ISTYVYWWIRQGVSRAL ENS+T RLPT+LHERL IR AK L+++GI P+++ IA
Subjt: RLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAE
Query: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
SLN+S+KKV NATEA++KV SLD++AFPSLNGLPGET HSYI D + N+PWHG + W LK EVNKL+N TL +RER+IIRLYHG+ +C TWE+IS++
Subjt: SLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
Query: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
GLSRERVRQVGL+A+EKLK AA+ + +EA+L
Subjt: GLSRERVRQVGLVALEKLKKAAKTRKMEAML
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| Arabidopsis top hits | e value | %identity | Alignment |
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| AT1G08540.1 RNApolymerase sigma subunit 2 | 6.6e-40 | 35.81 | Show/hide |
Query: SEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
S +LL+ E LS I+ L LE + L ER G +P+ Q A + + + LR R+ +L ++K+ SN+RLV+SIA+ Y G + DLVQ G G
Subjt: SEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIG
Query: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
L+RG EKFD++KGFK STY +WWI+Q V ++L + SR +RLP H+ E ++ A+ +L E G P + IAE+ +S K++ + SLD++
Subjt: LLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRL-QEKGITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREA
Query: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNKLINLTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
+ N P E IAD + D I ++ +++K+++ +LG RE+++IR G+ D T +EI + +G+SRERVRQ+ A KLK
Subjt: FPSLNGLPGETHHSYIADNRLENNPWHGTDTWI---LKAEVNKLINLTLGDREREIIRLYHGL-DNECLTWEEISKRIGLSRERVRQVGLVALEKLKKAA
Query: KTRKMEAMLL
+ ++ L+
Subjt: KTRKMEAMLL
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| AT1G64860.1 sigma factor A | 4.7e-195 | 70.35 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PW+ N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRRI +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRIGLSRERVRQVGLVALEKL
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRIGLSRERVRQVGLVALEKL
Query: KKAAKTRKMEAMLLKH
K AA+ RKMEAM+LK+
Subjt: KKAAKTRKMEAMLLKH
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| AT1G64860.2 sigma factor A | 1.9e-180 | 69.29 | Show/hide |
Query: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
MATAA+IGL KRLL+SS Y+SD TEK L NDH Q ++ TKS + AK ++N+SPS+PSSNRH+Q KA+KE VD S T +PW+ N T E
Subjt: MATAAIIGLGAAKRLLNSSSYYSDFTEKVLYANDHRLGQSQVSPTKSVVIAKGSANFSPSYPSSNRHSQCIKAVKEHVDTPSSPTAEPWIHNTTIWE---
Query: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
D++ + +VEA+LLLQKSMLEK WNLSFE+ VS++ P T +KK+PV TCSG+SARQRRI +K+K HV +S +
Subjt: ---DEETDLKCTVEALLLLQKSMLEKQWNLSFEQTVSTDAPRGKT--EKKVPV-TCSGVSARQRRISSKRKIQSKHVFMAQPKISKQLRPTISPELLQNR
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
++GYVKG++SE++LSH EVVRLSKKIK GL L++ K RLK+RLGCEPS++QLA+SLKISRAEL++ +MEC LAREKLAMSNVRLVMSIAQRYDN+GAEM+
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
DLVQGGLIGLLRGIEKFDSSKGF+ISTYVYWWIRQGVSRALV+NSRTLRLPTHLHERLGLIRNAK+RLQEKGITPS+DRIAESLNMS+KKV+NATEA+SK
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKVRLQEKGITPSLDRIAESLNMSKKKVKNATEAISK
Query: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
VFSLDR+AFPSLNGLPGETHHSYIAD RLENNPWHG D LK EV+KLI+ TLG+RE+EIIRLY+GLD ECLTWE+ISKRI
Subjt: VFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLDNECLTWEEISKRI
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| AT2G36990.1 RNApolymerase sigma-subunit F | 5.8e-36 | 32.27 | Show/hide |
Query: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
L+ ++ G +++LL+ E L I+ L LE+ K +L+ + GCEP+ + A ++ IS L+S + +REKL +N+RLV+ IA++Y N G
Subjt: LKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISLKISRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMA
Query: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
DL+Q G +GL++ +EKF G + +TY YWWIRQ + +++ +NSRT+RLP +++ LG + A K +QE PS + +A + +S +K+
Subjt: DLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNA-KVRLQEKGITPSLDRIAESLNMSKKKVKNATEAIS
Query: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
S+ + + + T D+ +E P +++ V L+N+ L +ER II+L G+D + + EI + GLS+ERVRQ+ AL
Subjt: KVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDREREIIRLYHGLD-NECLTWEEISKRIGLSRERVRQVGLVALE
Query: KLKKAAKTRKMEA
+LK+ + + A
Subjt: KLKKAAKTRKMEA
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| AT5G13730.1 sigma factor 4 | 5.4e-34 | 33.62 | Show/hide |
Query: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISL--------KI
S KR+ + + + ++ + E + V G LS E V+L +K G L E LG E+++ L K
Subjt: SSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLVSEELLSHAEVVRLSKKIKVGLALEERKIRLKERLGCEPSEDQLAISL--------KI
Query: SRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL
S E+ R E AREK+ RLV+SIA Y G + DL+Q G IGLLRG E+FD +G+K+STYVYWWI+Q + RA+ SR ++LP + E
Subjt: SRAELRSRVMECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPTHLHERL
Query: GLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDR
+ A L K PS + IAE LN++ V+ A E SLDR A + G I E P +K E+ +L+ +L R
Subjt: GLIRNAKVRLQEK-GITPSLDRIAESLNMSKKKVKNATEAISKVFSLDREAFPSLNGLPGETHHSYIADNRLENNPWHGTDTWILKAEVNKLINLTLGDR
Query: EREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
E ++ LY GL+ E +++EEI K + LSRERVRQ+ +AL+KL+
Subjt: EREIIRLYHGLDNEC-LTWEEISKRIGLSRERVRQVGLVALEKLK
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