; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001636 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001636
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionzf-RVT domain-containing protein
Genome locationscaffold10:2331718..2333033
RNA-Seq ExpressionSpg001636
SyntenySpg001636
Gene Ontology termsGO:0019538 - protein metabolic process (biological process)
GO:0034641 - cellular nitrogen compound metabolic process (biological process)
GO:1990547 - mitochondrial phosphate ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0005315 - inorganic phosphate transmembrane transporter activity (molecular function)
GO:0008237 - metallopeptidase activity (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057203.1 double-stranded RNA-binding protein 1 isoform X1 [Cucumis melo var. makuwa]6.1e-1162.5Show/hide
Query:  LMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLG
        ++W+ WGE+++RVFRGRERDS +VWSL RFHV LW  + K+FCNY +G
Subjt:  LMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLG

KAG7014044.1 hypothetical protein SDJN02_24216, partial [Cucurbita argyrosperma subsp. argyrosperma]6.8e-1048.84Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDP-VRDQ
        +IEE LLHPP  E  R L             G+R +R FRG ER   DVW+   F VSLW S +K  CNY LGLILLD  P +R+Q
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDP-VRDQ

TYK19563.1 uncharacterized protein E5676_scaffold416G00660 [Cucumis melo var. makuwa]5.9e-2257.95Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDPVRDQRSM
        M E F+LHPP +E+ RFL  A +C +MW++WGERN+RVFRG++RD  ++ SL RFHVSLW SVSK+FCNY LG I L   P  D   M
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDPVRDQRSM

TYK23653.1 SIL1 [Cucumis melo var. makuwa]5.2e-1048.75Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYL---LGLILL
        +I EFLL  P+RE+  FL   G+C ++WNLWGERNNRVFRG ER+  +VWSL R    L   V++ + N +   LG++L+
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYL---LGLILL

XP_016900613.1 PREDICTED: uncharacterized protein LOC107990976 [Cucumis melo]9.7e-1754.43Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDW
        MIEEFLL+ P  E  RFL +A +C ++W LW E N RVF G ER + ++W + R+HVSLW S+SK FCNY L +IL  W
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDW

TrEMBL top hitse value%identityAlignment
A0A1S4DXB1 uncharacterized protein LOC1079909764.7e-1754.43Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDW
        MIEEFLL+ P  E  RFL +A +C ++W LW E N RVF G ER + ++W + R+HVSLW S+SK FCNY L +IL  W
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDW

A0A5D3D5D0 Double-stranded RNA-binding protein 1 isoform X13.0e-1162.5Show/hide
Query:  LMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLG
        ++W+ WGE+++RVFRGRERDS +VWSL RFHV LW  + K+FCNY +G
Subjt:  LMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLG

A0A5D3D7T2 Uncharacterized protein2.9e-2257.95Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDPVRDQRSM
        M E F+LHPP +E+ RFL  A +C +MW++WGERN+RVFRG++RD  ++ SL RFHVSLW SVSK+FCNY LG I L   P  D   M
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDPVRDQRSM

A0A5D3DJ76 SIL12.5e-1048.75Show/hide
Query:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYL---LGLILL
        +I EFLL  P+RE+  FL   G+C ++WNLWGERNNRVFRG ER+  +VWSL R    L   V++ + N +   LG++L+
Subjt:  MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYL---LGLILL

A0A5D3DK64 DNA repair protein RAD51-like protein 4 isoform X13.6e-0942.11Show/hide
Query:  IEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILL
        IEEFLLH P R+E  FL  AG C ++W++W ERN++VFRGR+R+  ++W L+     L   +S + C+ +  +  L
Subjt:  IEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGAGGAGTTCCTCCTCCATCCGCCGATTCGTGAGGAGGCGAGATTTTTGCGGCAAGCAGGGATGTGTGATTTGATGTGGAATCTTTGGGGGGAAAGAAATAATAG
AGTTTTTAGGGGAAGGGAGAGAGACTCAGATGATGTGTGGTCTCTCACTAGATTTCATGTATCTCTTTGGGCATCAGTTTCTAAGGTGTTTTGTAATTATCTGTTAGGCC
TTATTTTGCTTGACTGGGATCCTGTTAGGGACCAACGTAGTATGGGATGCATTTGTCCCACATTGGAAAGATATGGGCTCCTAATGGGCCGGTGGTCGACGACTTCGGAG
AGGAGTGACGGCGGAGGGGTTGACCGGAACCAGCTGAGTGAAGCGTCGCCGTGCACAGCCGTCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGGTAG
TATGGAATGCCTTTGTCCCACATTGGAAAGATATGGGCTCCTAATGGGGTACAATATTGCTATAGCATTTCACAGGACACAGCACTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGATCGAGGAGTTCCTCCTCCATCCGCCGATTCGTGAGGAGGCGAGATTTTTGCGGCAAGCAGGGATGTGTGATTTGATGTGGAATCTTTGGGGGGAAAGAAATAATAG
AGTTTTTAGGGGAAGGGAGAGAGACTCAGATGATGTGTGGTCTCTCACTAGATTTCATGTATCTCTTTGGGCATCAGTTTCTAAGGTGTTTTGTAATTATCTGTTAGGCC
TTATTTTGCTTGACTGGGATCCTGTTAGGGACCAACGTAGTATGGGATGCATTTGTCCCACATTGGAAAGATATGGGCTCCTAATGGGCCGGTGGTCGACGACTTCGGAG
AGGAGTGACGGCGGAGGGGTTGACCGGAACCAGCTGAGTGAAGCGTCGCCGTGCACAGCCGTCGAGACGTCGGCTTTCCGGGGAGGGGCAATTGTTAGGGACCAAGGTAG
TATGGAATGCCTTTGTCCCACATTGGAAAGATATGGGCTCCTAATGGGGTACAATATTGCTATAGCATTTCACAGGACACAGCACTCATGA
Protein sequenceShow/hide protein sequence
MIEEFLLHPPIREEARFLRQAGMCDLMWNLWGERNNRVFRGRERDSDDVWSLTRFHVSLWASVSKVFCNYLLGLILLDWDPVRDQRSMGCICPTLERYGLLMGRWSTTSE
RSDGGGVDRNQLSEASPCTAVETSAFRGGAIVRDQGSMECLCPTLERYGLLMGYNIAIAFHRTQHS