CuGenDBv2

Gene ID	Spg001670
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein root UVB sensitive 1, chloroplastic isoform X1
Genome location	scaffold10:131717..141634
RNA-Seq Expression	Spg001670
Synteny	Spg001670
Gene Ontology terms	GO:0007155 - cell adhesion (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0005540 - hyaluronic acid binding (molecular function)
InterPro domains	IPR006968 - Root UVB sensitive family IPR026960 - Reverse transcriptase zinc-binding domain

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008449956.1 PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo]

1.6e-17

83.33

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Query:  EPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        EPK+GLLS EAKESAANI++RLQLGSKLSDVA+CE DVLELLSL+  ENYILSEHRG+YC
Subjt:  EPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

XP_008449956.1 PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis melo]

3.0e-40

92.05

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGWLTDGLIARPLTTRIC+ HV
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV

XP_011651345.1 protein root UVB sensitive 1, chloroplastic isoform X1 [Cucumis sativus]

2.4e-18

86.67

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Query:  EPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        EPK+ LLS EAKESAANIEKRLQLGSKLSDVA+CEEDVLELLSL+  ENYILSEHRG+YC
Subjt:  EPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

XP_016900848.1 PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo]

2.4e-18

79.69

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Query:  SFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        +F +EPK+GLLS EAKESAANI++RLQLGSKLSDVA+CE DVLELLSL+  ENYILSEHRG+YC
Subjt:  SFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

XP_016900848.1 PREDICTED: protein root UVB sensitive 1, chloroplastic isoform X2 [Cucumis melo]

6.6e-40

92.22

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT
        VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPL  RI   H+ T
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT

XP_022148171.1 protein root UVB sensitive 1, chloroplastic isoform X1 [Momordica charantia]

1.9e-18

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Query:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        L P V  L  RL        EPK+ LLSTEAKESAANIEKRLQLGSKLSDV SCEEDVLEL SLYK ENYILSE RGRYC
Subjt:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

XP_022148171.1 protein root UVB sensitive 1, chloroplastic isoform X1 [Momordica charantia]

1.5e-39

90.91

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGW TDGLIARPLTTRIC+ HV
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV

XP_038881395.1 protein root UVB sensitive 1, chloroplastic [Benincasa hispida]

4.6e-41

91.11

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDC+PGGRLQ+SLEYV+REFNHVKYDGELAGWLTDGLIARPLT RIC+ HVAT
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT

XP_038881395.1 protein root UVB sensitive 1, chloroplastic [Benincasa hispida]

6.4e-19

72.5

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Query:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        L P V  L  RL        EPK+G+LS EAKESAANIEKRLQLGSKLSDVA+CEEDVLELLSL+  ENYILSEHRG+YC
Subjt:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

XP_038881395.1 protein root UVB sensitive 1, chloroplastic [Benincasa hispida]

3.0e-40

92.05

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGWLTDGLIARPLTTRIC+ HV
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9N6 Uncharacterized protein

5.3e-19

83.87

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Query:  LKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        ++EPK+ LLS EAKESAANIEKRLQLGSKLSDVA+CEEDVLELLSL+  ENYILSEHRG+YC
Subjt:  LKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

A0A0A0L9N6 Uncharacterized protein

8.1e-36

89.29

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRIC
        VMLKESA P DMLKALFHVNYLHWLERNAGI ARSA+NDC+PGGRLQISLEYV+REF HVKYDGELAGWLTDGLIARPL  RIC
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRIC

A0A1S3BP56 protein root UVB sensitive 1, chloroplastic isoform X1

7.6e-18

83.33

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Query:  EPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        EPK+GLLS EAKESAANI++RLQLGSKLSDVA+CE DVLELLSL+  ENYILSEHRG+YC
Subjt:  EPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

A0A1S3BP56 protein root UVB sensitive 1, chloroplastic isoform X1

3.2e-40

92.22

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT
        VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPL  RI   H+ T
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT

A0A1S4DXZ7 protein root UVB sensitive 1, chloroplastic isoform X2

1.4e-40

92.05

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGWLTDGLIARPLTTRIC+ HV
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV

A0A1S4DXZ7 protein root UVB sensitive 1, chloroplastic isoform X2

1.2e-18

79.69

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Query:  SFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        +F +EPK+GLLS EAKESAANI++RLQLGSKLSDVA+CE DVLELLSL+  ENYILSEHRG+YC
Subjt:  SFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

A0A1S4DXZ7 protein root UVB sensitive 1, chloroplastic isoform X2

1.4e-40

92.05

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGWLTDGLIARPLTTRIC+ HV
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV

A0A6J1D4K5 protein root UVB sensitive 1, chloroplastic isoform X1

9.0e-19

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Query:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        L P V  L  RL        EPK+ LLSTEAKESAANIEKRLQLGSKLSDV SCEEDVLEL SLYK ENYILSE RGRYC
Subjt:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

A0A6J1D4K5 protein root UVB sensitive 1, chloroplastic isoform X1

7.1e-40

90.91

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV
        VMLKESASPVDMLKA+FHVNYLHWLERNAGI ARSASNDCRPGGRLQ+SLEYV+REF HVKYDGELAGW TDGLIARPLTTRIC+ HV
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHV

A0A6J1F1U0 protein root UVB sensitive 1, chloroplastic isoform X1

1.9e-21

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Query:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC
        L P V  L  RL   C   KEPK+GLLSTEAKESAANIEKRLQLGSKLSDVA CEEDVL+LLSLYK ENYILSEHRGRYC
Subjt:  LMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYC

SwissProt top hits

e value

%identity

Alignment

Q7X6P3 Protein root UVB sensitive 1, chloroplastic

1.3e-27

67.47

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRI
        VMLKES++P DML++LF VNYL+WLE+NAGI   S  +DC+PGGRL ISL+YV+REF H K D E  GW+T+GLIARPL TRI
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRI

Q7X6P3 Protein root UVB sensitive 1, chloroplastic

1.1e-10

46.15

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Query:  LLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYCKHPSCFDSDGDLDVSMSSVEFVF
        +LS+EAK +AA+IE+RLQLGSKLSDV   +E+ + L  LY+ E YIL+EH+GR+C       +  D+  S+  V +++
Subjt:  LLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYCKHPSCFDSDGDLDVSMSSVEFVF

Arabidopsis top hits

e value

%identity

Alignment

AT3G45890.1 Protein of unknown function, DUF647

9.5e-29

67.47

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Query:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRI
        VMLKES++P DML++LF VNYL+WLE+NAGI   S  +DC+PGGRL ISL+YV+REF H K D E  GW+T+GLIARPL TRI
Subjt:  VMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRI

AT3G45890.1 Protein of unknown function, DUF647

8.1e-12

46.15

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Query:  LLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYCKHPSCFDSDGDLDVSMSSVEFVF
        +LS+EAK +AA+IE+RLQLGSKLSDV   +E+ + L  LY+ E YIL+EH+GR+C       +  D+  S+  V +++
Subjt:  LLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYCKHPSCFDSDGDLDVSMSSVEFVF

Sequences

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CDS sequence

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ATGGCTATATGTGCTGGATTGATGCCTGTAGTTGTTCATCTTCCAATCCGATTAACTGACTTTTGTAGTTTTCTTAAGGAGCCAAAAATGGGTTTACTATCTACTGAAGC
AAAGGAATCAGCAGCTAATATTGAAAAGCGACTTCAATTGGGATCTAAGCTCAGTGATGTGGCGAGCTGTGAAGAGGACGTTCTTGAACTCTTGAGTCTGTATAAAATTG
AAAATTACATTCTGTCAGAGCACAGGGGAAGATATTGTAAGCATCCTTCTTGTTTTGATTCTGATGGGGACTTGGATGTTAGTATGAGTAGTGTGGAATTCGTTTTTCCT
AATTCAGTACCAAAGTTGGTTGATCTGTTTGAAGCGTTTGTGTTGACCTTAGGGAAGAGTCCTCTCATTGTCAAGTGCTTTGGGAGGAGTCCTTTCAATGTCAAGTTCAT
CAAGCTAACGAAAGGGGAAAAAGACTGGGAAGTTATTGATCAAGACTTGCATGACCAACATTATTTAATGAAGAAAGATGGTAACTTTCAGGTATCCAATACAAAGGAAA
TTGAAGGCTTCCATTTTACCCGAGCTAAATCTATAATAGAAGATGAAAAGGTGTCATTAGAAGTTGAGGATGACTTATTACCAGAAAATTCTCTACGTCAGTTTGTGAAC
ACTACAAACAGACTTCGAAATAAAGTAATTAATATGCCAGAGGACACAACTTTAAATGCGCCTAGTCTACATCCCAAGGATGGTGTATTTGATTCGAATAGACTTCCTTT
GGTATCTGAACCACCAGCCTTGGATGTGACAACAGATTTAATTGCCCAACCAATGAACTCAATTGTTTTAACAAGAATTTCAACCGTCCGAAGGAGCTTGAATACGGATG
ACAAAGTGCAAAGAAAGTTTAGAAGTTGGATATTATCTCCTTCGGGCTGTAGGCTTTGCCTTAGGGAGAATGAGAATATAGATCATATTTTTTTGCATTGTGAGTTTGCC
AACAAAGCGTGGAACTTCATTGGTGGTCTGCTGGGATTGTCTTTCTGTTTGTCGAGGAGAGTGGATGAGTGGTTAGATGAAGGGTTGATTGCGTGGAATCTGAAAAAGAA
GGCTAAGCCACTTCGAGGAGGCGATTGGACTGGAGTGCTTTCATCAAATGATGCATGTGGGCTGAGTCATTCCCACCCCAAGTGGTGGCCTGATTCGGCCGTGTCGGGAA
GAGATTCACATAGAGACTCTTACGTTACGAGAATCTCTTTCTATGTTAGCGGGAGGGGGCGAGTCAGGGGGTTTGCTTGCTGGCTCTCAGGGCTTCTCGTCGGTCCTACC
AGGGGACCCCCCCCCCACCACAAGATTGGCTCTGATGGTACTCAATTTACGAAAGTTTTATTCTCCGCATCTAAAGTCATCTCTCCATCCAAAAAGCCATGTTCCTATAG
TATTGATAGTAGCTCTGATGATGAATATGATGTTAGTTTAAGTAATGTGGATTTCGTAATCATTCTAATTGAATCCTTTGCTACAGATTTTGACTTTTTAATTCAAGCTC
CAGATAAGTCTGAACCTTTGCACATTAAAGAATCAGTAACAATTCAGAATGATAGTCATGTTACCACAACAATTCCACCTCCTCAGTTGGGTAATTTCTGTTCTTTAATC
AAGGCTAGTGGGCTCCAATTTTGGGAAATTATTCCTTCAATCCCTAAGGGGGTCTTCCATCGCCCTCCGGCACAAGATACAACAGAACGCCGCCACCAACGAAGGCATCT
TTCTCGTGAGAATGTCGAAAGTATTAACTCTTCCATGGATAACTTGTCAGGAGGTGGAATCTCTGCTTTCTTTTCTTTGGTAATGCTTAAAGAAAGTGCTTCACCAGTAG
ACATGCTCAAGGCATTGTTTCATGTTAATTATTTGCACTGGCTAGAGAGAAATGCCGGAATAATAGCAAGAAGTGCCTCTAATGACTGCAGACCGGGGGGAAGGTTGCAA
ATATCTCTGGAGTATGTGCAGAGGGAATTCAACCATGTAAAATATGATGGGGAATTGGCGGGTTGGTTGACTGATGGCCTAATTGCAAGGCCCTTAACTACTAGGATTTG
TCAATTTCATGTAGCCACGTAG

mRNA sequence

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Protein sequence

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MAICAGLMPVVVHLPIRLTDFCSFLKEPKMGLLSTEAKESAANIEKRLQLGSKLSDVASCEEDVLELLSLYKIENYILSEHRGRYCKHPSCFDSDGDLDVSMSSVEFVFP
NSVPKLVDLFEAFVLTLGKSPLIVKCFGRSPFNVKFIKLTKGEKDWEVIDQDLHDQHYLMKKDGNFQVSNTKEIEGFHFTRAKSIIEDEKVSLEVEDDLLPENSLRQFVN
TTNRLRNKVINMPEDTTLNAPSLHPKDGVFDSNRLPLVSEPPALDVTTDLIAQPMNSIVLTRISTVRRSLNTDDKVQRKFRSWILSPSGCRLCLRENENIDHIFLHCEFA
NKAWNFIGGLLGLSFCLSRRVDEWLDEGLIAWNLKKKAKPLRGGDWTGVLSSNDACGLSHSHPKWWPDSAVSGRDSHRDSYVTRISFYVSGRGRVRGFACWLSGLLVGPT
RGPPPHHKIGSDGTQFTKVLFSASKVISPSKKPCSYSIDSSSDDEYDVSLSNVDFVIILIESFATDFDFLIQAPDKSEPLHIKESVTIQNDSHVTTTIPPPQLGNFCSLI
KASGLQFWEIIPSIPKGVFHRPPAQDTTERRHQRRHLSRENVESINSSMDNLSGGGISAFFSLVMLKESASPVDMLKALFHVNYLHWLERNAGIIARSASNDCRPGGRLQ
ISLEYVQREFNHVKYDGELAGWLTDGLIARPLTTRICQFHVAT

Spg001670 (gene) of Sponge gourd (cylindrica) v1 genome