; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001700 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001700
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box domain-containing protein
Genome locationscaffold10:3724893..3725522
RNA-Seq ExpressionSpg001700
SyntenySpg001700
Gene Ontology termsNA
InterPro domainsIPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]7.2e-2737.44Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG
        VE+FAFG +   W SV F   L + D GVY NG L+W+       +SS  + +   D+E E  ++IS PQ             VFD  LYL++ +     
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG

Query:  YHVWKMEEEDLWIKEFVIAMP--ICR--YYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL
        Y VWKM++   WIK FVI+ P  +C   +    W    +  I+  EDGK+LC+++ ++LILYDPKT  ++ L + S ++++ L ++ I SFNF+ L  IL
Subjt:  YHVWKMEEEDLWIKEFVIAMP--ICR--YYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL

Query:  AGD
        AG+
Subjt:  AGD

XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]3.7e-3141.58Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        V++FAFG +S EW  V           GVYLNG L+W+G   +     S Y  V+   D+++E+F++ISFP  G D       I V++  LYL+ F  E 
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRP--YDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL
        F YH WKMEE+  W KEFV+A+P   ++ +   P  Y +Q+I+  EDG +LC+ + + LILYDP T   + L     EIKE +W++QI+SF+F+ L  IL
Subjt:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRP--YDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL

Query:  AG
        AG
Subjt:  AG

XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]4.2e-2737.5Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM
        V++FAFG +S EW  +           GVY NG L+W+G      N  L S Y  V+   D+ +E+FK+IS P  G +       + V++  LYL++   
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM

Query:  ECFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFD
        E F YHVWKM+E+  W KEFV+A+P      + R++ +    Y +Q+++  EDG +LC+ + + LI+YDPKT + + L +   EIKE +W +QI+SF+F+
Subjt:  ECFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFD

Query:  PLSKILAG
         L   L G
Subjt:  PLSKILAG

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]3.8e-2840.89Show/hide
Query:  VEVFAFGPS--SNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        +E F FG +  S     VP S+ +E  +  VY NG+L+WIG    +      NVL   D+E+E  +EISFPQ+G        +I VF+  LYL++ +   
Subjt:  VEVFAFGPS--SNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYD--VQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL
          YHVWKMEE+  W K F + +P  + Y  + R YD  +Q+I   +DGK+LC+IS ++LILY+ KT R ++L      IK+   +++I SFNFD L KIL
Subjt:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYD--VQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL

Query:  AGD
         GD
Subjt:  AGD

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]6.7e-3342.51Show/hide
Query:  VEVFAFGPSSNEWK---SVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEME
        VE+FAFG +S EW    SVP+ L       GVY NG L+W+G   +   +   +V+   D+E+++FK+ISFP  G D + +   I V++  LYL++   +
Subjt:  VEVFAFGPSSNEWK---SVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEME

Query:  CFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDP
         F YHVWKMEE+  WIKEFV+A+P      + R++ +    Y +Q+I+  EDG +LC+ + + LILYDPKT  ++ L +   EIK+ +W+YQI SFNF+ 
Subjt:  CFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDP

Query:  LSKILAG
        L  ILAG
Subjt:  LSKILAG

TrEMBL top hitse value%identityAlignment
A0A0A0M1M5 F-box domain-containing protein1.8e-3141.58Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        V++FAFG +S EW  V           GVYLNG L+W+G   +     S Y  V+   D+++E+F++ISFP  G D       I V++  LYL+ F  E 
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELE--SSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRP--YDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL
        F YH WKMEE+  W KEFV+A+P   ++ +   P  Y +Q+I+  EDG +LC+ + + LILYDP T   + L     EIKE +W++QI+SF+F+ L  IL
Subjt:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRP--YDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL

Query:  AG
        AG
Subjt:  AG

A0A1S3BQV8 putative F-box protein At3g211202.1e-2737.5Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM
        V++FAFG +S EW  +           GVY NG L+W+G      N  L S Y  V+   D+ +E+FK+IS P  G +       + V++  LYL++   
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM

Query:  ECFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFD
        E F YHVWKM+E+  W KEFV+A+P      + R++ +    Y +Q+++  EDG +LC+ + + LI+YDPKT + + L +   EIKE +W +QI+SF+F+
Subjt:  ECFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFD

Query:  PLSKILAG
         L   L G
Subjt:  PLSKILAG

A0A5D3CIX9 Putative F-box protein2.1e-2737.5Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM
        V++FAFG +S EW  +           GVY NG L+W+G      N  L S Y  V+   D+ +E+FK+IS P  G +       + V++  LYL++   
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCY----NVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEM

Query:  ECFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFD
        E F YHVWKM+E+  W KEFV+A+P      + R++ +    Y +Q+++  EDG +LC+ + + LI+YDPKT + + L +   EIKE +W +QI+SF+F+
Subjt:  ECFGYHVWKMEEEDLWIKEFVIAMP------ICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFD

Query:  PLSKILAG
         L   L G
Subjt:  PLSKILAG

A0A5D3CM94 Putative F-box protein3.5e-2737.44Show/hide
Query:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG
        VE+FAFG +   W SV F   L + D GVY NG L+W+       +SS  + +   D+E E  ++IS PQ             VFD  LYL++ +     
Subjt:  VEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFG

Query:  YHVWKMEEEDLWIKEFVIAMP--ICR--YYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL
        Y VWKM++   WIK FVI+ P  +C   +    W    +  I+  EDGK+LC+++ ++LILYDPKT  ++ L + S ++++ L ++ I SFNF+ L  IL
Subjt:  YHVWKMEEEDLWIKEFVIAMP--ICR--YYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL

Query:  AGD
        AG+
Subjt:  AGD

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like1.9e-2840.89Show/hide
Query:  VEVFAFGPS--SNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC
        +E F FG +  S     VP S+ +E  +  VY NG+L+WIG    +      NVL   D+E+E  +EISFPQ+G        +I VF+  LYL++ +   
Subjt:  VEVFAFGPS--SNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMEC

Query:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYD--VQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL
          YHVWKMEE+  W K F + +P  + Y  + R YD  +Q+I   +DGK+LC+IS ++LILY+ KT R ++L      IK+   +++I SFNFD L KIL
Subjt:  FGYHVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYD--VQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKIL

Query:  AGD
         GD
Subjt:  AGD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23160.1 F-box family protein8.3e-0530.3Show/hide
Query:  EVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNVLVYFDVEEERF
        ++   G  + +W+++  SLR EI  +GV +NG L+++G      N + +  Y   +V FD+  E+F
Subjt:  EVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIG----CYNVELESSYKNVLVYFDVEEERF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGG
TGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATATTTCGACGTGGAAGAGGAGAGATTCAAGG
AAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATAC
CATGTGTGGAAGATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCAT
CGAAACTTTGGAAGATGGGAAGATGTTGTGTATGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAA
TTAAGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCATTTAATACGGTAGTAGAGGAAGTGGAGGTTTTCGCATTTGGCCCGAGTTCGAACGAATGGAAGAGTGTTCCCTTCTCGCTGCGTCTCGAGATCAACGACGATGG
TGTTTACTTGAATGGAGCCCTTTTCTGGATTGGATGTTATAATGTAGAACTGGAATCCAGTTATAAGAACGTCCTCGTATATTTCGACGTGGAAGAGGAGAGATTCAAGG
AAATTTCTTTTCCCCAAGCTGGGAAAGATGGGAAGAGAAATTCTTTAGCCATTAGGGTTTTTGATAGCCATCTCTATCTCTCTATCTTTGAGATGGAATGTTTTGGATAC
CATGTGTGGAAGATGGAAGAAGAAGATTTGTGGATTAAGGAATTTGTTATTGCAATGCCAATTTGTCGTTATTATGATGTGTATTGGAGGCCTTATGATGTGCAAATCAT
CGAAACTTTGGAAGATGGGAAGATGTTGTGTATGATTTCGAGAATGAATTTAATCTTGTATGATCCGAAGACTGTGAGGTCAAAGGCATTGTTTGAATTGTCGGATGAAA
TTAAGGAAGAATTGTGGATTTATCAAATTCAATCCTTCAATTTTGATCCTCTCTCCAAGATTCTGGCGGGAGATGTTTGA
Protein sequenceShow/hide protein sequence
MPFNTVVEEVEVFAFGPSSNEWKSVPFSLRLEINDDGVYLNGALFWIGCYNVELESSYKNVLVYFDVEEERFKEISFPQAGKDGKRNSLAIRVFDSHLYLSIFEMECFGY
HVWKMEEEDLWIKEFVIAMPICRYYDVYWRPYDVQIIETLEDGKMLCMISRMNLILYDPKTVRSKALFELSDEIKEELWIYQIQSFNFDPLSKILAGDV