; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001712 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001712
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpentatricopeptide repeat-containing protein At5g16420, mitochondrial
Genome locationscaffold10:1476213..1479043
RNA-Seq ExpressionSpg001712
SyntenySpg001712
Gene Ontology termsGO:0015986 - ATP synthesis coupled proton transport (biological process)
GO:0016020 - membrane (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0046933 - proton-transporting ATP synthase activity, rotational mechanism (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581089.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]4.6e-6186.76Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MW  FRCNKF PTSLHG IS +PLR IFAVDSS+QSYTV PPIKPWPQ LYPKRLVAMIIRQQNLDLALQIFH+AGK+HPG+SHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL EL++SGI CGEDLFI+VIRNYGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

KAG7017816.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]4.6e-6186.76Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MW  FRCNKF PTSLHG IS +PLR IFAVDSS+QSYTV PPIKPWPQ LYPKRLVAMIIRQQNLDLALQIFH+AGK+HPG+SHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL EL++SGI CGEDLFI+VIRNYGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

XP_022154201.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Momordica charantia]1.7e-6085.29Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MWC+   NK K  SLH  I+IVPLR IFAVDSSLQSYTV PPIKPWPQ LYP+RLV+MII QQNLDLALQIFHHAGKFHPGFSHNYDTYHAI+HRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL++LQSSGIKCGEDLFITVIR+YGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

XP_022934977.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Cucurbita moschata]1.5e-5985.29Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MW   R NKF PTS HGPI+ +PLR IFAVDSS+QSYTV PPIKPWPQ LYPKRLVAMIIRQQNLDLALQIFH+AGK+HPGFSHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL EL++SGI CGEDLFI+VIRNYGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

XP_038893383.1 pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Benincasa hispida]1.0e-6086.03Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MWC+FR NKFK  SL  PI IVPLR IFAVDS LQSYTV PPIKPWPQ LYPKRLV+MIIRQQNLDLALQIFH+AGK+HPGFSHNYDTYHAII+RLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL+ELQ+SGI CGEDLFITVIR+YGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

TrEMBL top hitse value%identityAlignment
A0A1S3BPE8 pentatricopeptide repeat-containing protein At5g16420, mitochondrial8.7e-5882.35Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        M C+FR N+FK  SLH PISIVPLR IFA+++ LQSYTV PPIKPWPQ L+PKRLVAMI RQQNLDLALQIFH+AGKFHP FSHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL+ELQ +GI C EDLFITVIR+YGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

A0A5D3C029 Pentatricopeptide repeat-containing protein8.7e-5882.35Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        M C+FR N+FK  SLH PISIVPLR IFA+++ LQSYTV PPIKPWPQ L+PKRLVAMI RQQNLDLALQIFH+AGKFHP FSHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL+ELQ +GI C EDLFITVIR+YGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

A0A6J1DN12 pentatricopeptide repeat-containing protein At5g16420, mitochondrial8.4e-6185.29Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MWC+   NK K  SLH  I+IVPLR IFAVDSSLQSYTV PPIKPWPQ LYP+RLV+MII QQNLDLALQIFHHAGKFHPGFSHNYDTYHAI+HRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL++LQSSGIKCGEDLFITVIR+YGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

A0A6J1F4B0 pentatricopeptide repeat-containing protein At5g16420, mitochondrial7.1e-6085.29Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MW   R NKF PTS HGPI+ +PLR IFAVDSS+QSYTV PPIKPWPQ LYPKRLVAMIIRQQNLDLALQIFH+AGK+HPGFSHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL EL++SGI CGEDLFI+VIRNYGLAGR
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

A0A6J1J5I0 pentatricopeptide repeat-containing protein At5g16420, mitochondrial6.0e-5984.56Show/hide
Query:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR
        MW  FR NKF PTSLH PIS + LR IF+VDSS+QSYTV PPIKPWPQ LYPKRLVAM+IRQQNLDLALQIFH+AGKFHPGFSHNYDTYHAIIHRLSRAR
Subjt:  MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRAR

Query:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        AFEPVESLL EL++SGI CGEDLFI+VIRNYGLA R
Subjt:  AFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

SwissProt top hitse value%identityAlignment
Q9FFE3 Pentatricopeptide repeat-containing protein At5g16420, mitochondrial1.8e-3961.31Show/hide
Query:  NKFKPTSLHGPISIVPLRSIFAVDSSLQSY-TVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVE
        ++  PT     ++   L S  A  +SLQ Y T KPPIKPWPQ L+PKRLV+MI +QQN+DLALQIF +AGK HPGF+HNYDTYH+I+ +LSRARAF+PVE
Subjt:  NKFKPTSLHGPISIVPLRSIFAVDSSLQSY-TVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVE

Query:  SLLVELQSS--GIKCGEDLFITVIRNYGLAGRRSSEM
        SL+ +L++S   IKCGE+LFI ++RNYGLAGR  S M
Subjt:  SLLVELQSS--GIKCGEDLFITVIRNYGLAGRRSSEM

Q9LQQ1 Pentatricopeptide repeat-containing protein At1g07740, mitochondrial8.8e-0730.43Show/hide
Query:  KPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAG
        KPW +  +   L  +    ++ + AL +FH   +   GF H+Y +Y ++I++L+++R F+ V+ +L  ++   ++C E LF+ +I++YG AG
Subjt:  KPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAG

Q9SS81 Pentatricopeptide repeat-containing protein At3g090604.7e-0833.33Show/hide
Query:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYG
        +P+ L PK ++ ++  ++N   A  +F  A + HPG++H+   YH I+ RLS  R    V  ++  ++S   KC ED+ ++VI+ YG
Subjt:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYG

Q9SYK1 Pentatricopeptide repeat-containing protein At1g056005.7e-0627.47Show/hide
Query:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        WP+ L P  L  ++ +Q+N   AL++F  A +  P + HN   Y  +I  L ++     ++ ++  ++    +C + +F +VIR +  AGR
Subjt:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

Arabidopsis top hitse value%identityAlignment
AT1G05600.1 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-0727.47Show/hide
Query:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        WP+ L P  L  ++ +Q+N   AL++F  A +  P + HN   Y  +I  L ++     ++ ++  ++    +C + +F +VIR +  AGR
Subjt:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

AT1G05600.2 Tetratricopeptide repeat (TPR)-like superfamily protein4.1e-0727.47Show/hide
Query:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR
        WP+ L P  L  ++ +Q+N   AL++F  A +  P + HN   Y  +I  L ++     ++ ++  ++    +C + +F +VIR +  AGR
Subjt:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAGR

AT1G07740.1 Tetratricopeptide repeat (TPR)-like superfamily protein6.3e-0830.43Show/hide
Query:  KPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAG
        KPW +  +   L  +    ++ + AL +FH   +   GF H+Y +Y ++I++L+++R F+ V+ +L  ++   ++C E LF+ +I++YG AG
Subjt:  KPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYGLAG

AT3G09060.1 Pentatricopeptide repeat (PPR) superfamily protein3.3e-0933.33Show/hide
Query:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYG
        +P+ L PK ++ ++  ++N   A  +F  A + HPG++H+   YH I+ RLS  R    V  ++  ++S   KC ED+ ++VI+ YG
Subjt:  WPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLVELQSSGIKCGEDLFITVIRNYG

AT5G16420.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.3e-4061.31Show/hide
Query:  NKFKPTSLHGPISIVPLRSIFAVDSSLQSY-TVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVE
        ++  PT     ++   L S  A  +SLQ Y T KPPIKPWPQ L+PKRLV+MI +QQN+DLALQIF +AGK HPGF+HNYDTYH+I+ +LSRARAF+PVE
Subjt:  NKFKPTSLHGPISIVPLRSIFAVDSSLQSY-TVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVE

Query:  SLLVELQSS--GIKCGEDLFITVIRNYGLAGRRSSEM
        SL+ +L++S   IKCGE+LFI ++RNYGLAGR  S M
Subjt:  SLLVELQSS--GIKCGEDLFITVIRNYGLAGRRSSEM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTGCCACTTCCGCTGCAACAAATTCAAACCCACTTCACTCCATGGCCCAATTTCCATTGTTCCTCTTCGTTCAATCTTCGCCGTTGATTCTTCTCTTCAGTCCTA
CACCGTCAAGCCGCCGATCAAGCCCTGGCCGCAGTGTCTCTATCCCAAGCGCCTCGTCGCTATGATCATTCGCCAACAGAATCTCGACCTTGCCCTTCAAATCTTCCACC
ACGCCGGCAAATTTCATCCCGGATTTTCCCACAACTACGATACCTATCATGCGATCATTCATCGTCTCTCTCGCGCTCGAGCTTTTGAACCCGTCGAGTCTCTGCTCGTG
GAATTGCAGAGTTCTGGGATAAAGTGCGGTGAAGATTTGTTCATTACTGTGATTAGAAACTATGGCCTTGCGGGTCGACGCTCGTCTGAGATGGCAAAGACAAGAGGTAG
AAGGGAAAAGGATGCTGAAGAGGAAGAGATGCCAGTGACACCCGAAGCACCGAAGAAGAAAGCGAAAAGAAGAAGAACACCCGAAGAGAGAGAGACCAAAAGATTGAGAA
GGCAACAACAAGCCGAAGTAACAGAGGTTTTGAGGAAGGTGATCGAGGATGTTACGGAAGAGGAAAATCAAGATAAGAGAGCAGAGGATGTGCCGGAGCAAGGGAATGGT
CAAGAAACTCAAGAACAGCAGGTTCAGGGAGAGGTTGTGCCGGAGCCGTCGCGTCGTCGCCGCCGCAAGCAAAAGGCGGGACGAATCAAGAGGGTTCGGATAGACACTCC
ATCTTCGCCAACAACTGAATCCGAGAAGGAAAATATAGAAAAAAAGGATCAAGAGAAAGAAGAGACTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGTGCCACTTCCGCTGCAACAAATTCAAACCCACTTCACTCCATGGCCCAATTTCCATTGTTCCTCTTCGTTCAATCTTCGCCGTTGATTCTTCTCTTCAGTCCTA
CACCGTCAAGCCGCCGATCAAGCCCTGGCCGCAGTGTCTCTATCCCAAGCGCCTCGTCGCTATGATCATTCGCCAACAGAATCTCGACCTTGCCCTTCAAATCTTCCACC
ACGCCGGCAAATTTCATCCCGGATTTTCCCACAACTACGATACCTATCATGCGATCATTCATCGTCTCTCTCGCGCTCGAGCTTTTGAACCCGTCGAGTCTCTGCTCGTG
GAATTGCAGAGTTCTGGGATAAAGTGCGGTGAAGATTTGTTCATTACTGTGATTAGAAACTATGGCCTTGCGGGTCGACGCTCGTCTGAGATGGCAAAGACAAGAGGTAG
AAGGGAAAAGGATGCTGAAGAGGAAGAGATGCCAGTGACACCCGAAGCACCGAAGAAGAAAGCGAAAAGAAGAAGAACACCCGAAGAGAGAGAGACCAAAAGATTGAGAA
GGCAACAACAAGCCGAAGTAACAGAGGTTTTGAGGAAGGTGATCGAGGATGTTACGGAAGAGGAAAATCAAGATAAGAGAGCAGAGGATGTGCCGGAGCAAGGGAATGGT
CAAGAAACTCAAGAACAGCAGGTTCAGGGAGAGGTTGTGCCGGAGCCGTCGCGTCGTCGCCGCCGCAAGCAAAAGGCGGGACGAATCAAGAGGGTTCGGATAGACACTCC
ATCTTCGCCAACAACTGAATCCGAGAAGGAAAATATAGAAAAAAAGGATCAAGAGAAAGAAGAGACTTAA
Protein sequenceShow/hide protein sequence
MWCHFRCNKFKPTSLHGPISIVPLRSIFAVDSSLQSYTVKPPIKPWPQCLYPKRLVAMIIRQQNLDLALQIFHHAGKFHPGFSHNYDTYHAIIHRLSRARAFEPVESLLV
ELQSSGIKCGEDLFITVIRNYGLAGRRSSEMAKTRGRREKDAEEEEMPVTPEAPKKKAKRRRTPEERETKRLRRQQQAEVTEVLRKVIEDVTEEENQDKRAEDVPEQGNG
QETQEQQVQGEVVPEPSRRRRRKQKAGRIKRVRIDTPSSPTTESEKENIEKKDQEKEET