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Spg001715 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001715
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 4-like
Genome locationscaffold10:1731239..1732365
RNA-Seq ExpressionSpg001715
SyntenySpg001715
Gene Ontology termsGO:0006313 - transposition, DNA-mediated (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0004803 - transposase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040870.1 uncharacterized protein E6C27_scaffold345G00200 [Cucumis melo var. makuwa]6.2e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
TYK09853.1 uncharacterized protein E5676_scaffold39G00210 [Cucumis melo var. makuwa]6.2e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
TYK29863.1 MuDRA-like transposase [Cucumis melo var. makuwa]6.2e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
XP_016901440.1 PREDICTED: uncharacterized protein LOC107991253 [Cucumis melo]2.1e-1663.49Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++ATSID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
XP_016902696.1 PREDICTED: uncharacterized protein LOC107991824 [Cucumis melo]8.1e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
TrEMBL top hitse value%identityAlignment
A0A1S4E0D5 uncharacterized protein LOC1079912531.0e-1663.49Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++ATSID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
A0A1S4E392 uncharacterized protein LOC1079918243.9e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
A0A5A7TC03 ZnF_PMZ domain-containing protein3.0e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
A0A5D3CDB8 Uncharacterized protein3.0e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
A0A5D3E198 MuDRA-like transposase3.0e-1661.9Show/hide
Query:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
        LI  NPGTYTA+E D   RFKF+FM++A SID W +C+PVISVDG ++KNK+ GTL++ACT +
Subjt:  LIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISVDGTSLKNKFSGTLLTACTFE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTGTTCGATGGTGTTTGGGACGTGGCAAGACTCTACAGTGGTTTTAAGTCTGGTGTTGTGACGTGTCCTTGTGATGCTAACCTTTCTCAACTCAAGGTATGTGC
TGCGAACTACCTCAATTTGGCTGACAGTAATAGTATCTGTCGGTTGACACTCTTTAGGAACTGGCAAGCGACGACGAGTGTTGCGTATAGGTTGATCGAAAGAAATCCAG
GTACGTATACCGCCCAGGAAATTGATTCAAATGACAGGTTCAAATTCTTTTTCATGAGTATTGCAACATCCATAGACGAGTGGAAACACTGTCTCCCAGTTATTTCTGTA
GATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTGTTCGATGGTGTTTGGGACGTGGCAAGACTCTACAGTGGTTTTAAGTCTGGTGTTGTGACGTGTCCTTGTGATGCTAACCTTTCTCAACTCAAGGTATGTGC
TGCGAACTACCTCAATTTGGCTGACAGTAATAGTATCTGTCGGTTGACACTCTTTAGGAACTGGCAAGCGACGACGAGTGTTGCGTATAGGTTGATCGAAAGAAATCCAG
GTACGTATACCGCCCAGGAAATTGATTCAAATGACAGGTTCAAATTCTTTTTCATGAGTATTGCAACATCCATAGACGAGTGGAAACACTGTCTCCCAGTTATTTCTGTA
GATGGTACATCTTTGAAGAATAAATTCAGTGGCACCCTTTTGACGGCCTGCACATTTGAGGTGAGATTTTAA
Protein sequenceShow/hide protein sequence
MILFDGVWDVARLYSGFKSGVVTCPCDANLSQLKVCAANYLNLADSNSICRLTLFRNWQATTSVAYRLIERNPGTYTAQEIDSNDRFKFFFMSIATSIDEWKHCLPVISV
DGTSLKNKFSGTLLTACTFEVRF