; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001717 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001717
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFanconi-associated nuclease
Genome locationscaffold10:3287293..3290771
RNA-Seq ExpressionSpg001717
SyntenySpg001717
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]1.2e-1628.57Show/hide
Query:  RFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQD
        +F N+ A+A++     R   FE GF       G     +   +T   W+ F      VNA +V+EFYANI + + + + VRG ++ ++  AIN  ++LQD
Subjt:  RFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQD

Query:  F--PHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASEI
            HA + E   A SN +    + ++  E  +W   +T + +     L+  A  W                             +S  IDVG II  ++
Subjt:  F--PHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASEI

Query:  SGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQETHQGGLVFGIHN
          C  KK   L FPN IT LC++  V EN  D IL        P L+ + R + T    L+ GI N
Subjt:  SGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQETHQGGLVFGIHN

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]5.8e-2231.64Show/hide
Query:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN
        V+F    A  +Y   +  R    E+GF        G LP F+   IT H+W+ FC+  E     +VREFYAN+ +     V VRGV+V+WS  AINA++ 
Subjt:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE
        L D P   ++E +   +   L   +  V V GA+W +S     T   + L   A  W                             +  SI+VG++I SE
Subjt:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE

Query:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET
        I  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ ++  T
Subjt:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.4e-2231.25Show/hide
Query:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN
        V+F    A  +Y   +  R    E+GF        G LP F+   IT H+W+ FC+  E     +VREFYAN+ + +   V VRGV+V+WS  AINA++ 
Subjt:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE
        L D P   ++E +   + + L   +  V   GA+W +S     T   + L   A  W                             +  SI+VG++I SE
Subjt:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE

Query:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET
        I  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ ++  T
Subjt:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]9.6e-1729.07Show/hide
Query:  VRFVNNLARAKYAE-------LLKRDFLFERGFSGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNL
        V+F +  A  +Y E        ++++F+++     + P F+   I  H+W+LFC+  E     +VREFY N+   D   V +RGV+V  S  AIN +++L
Subjt:  VRFVNNLARAKYAE-------LLKRDFLFERGFSGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNL

Query:  QDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW---------------------MSL--------SIDVGKIIASEI
         D P   ++E V   +  +L   +  V + GA+W +S     T   + L   A  W                     +SL        SI+VG++I  EI
Subjt:  QDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW---------------------MSL--------SIDVGKIIASEI

Query:  SGCWKKKVGKLFFPNTITMLCKRAGVP
          C  +K G LFFP+ IT +C+    P
Subjt:  SGCWKKKVGKLFFPNTITMLCKRAGVP

TYH88163.1 hypothetical protein ES332_D01G168900v1 [Gossypium tomentosum]2.5e-1733.5Show/hide
Query:  ERGF---SGDL---PHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQDFPHAGYNEMVVAPSNEQLSDA
        E+GF   S DL   P  +R  I    WE FC+   F + ++VREFYA++  +D  +VIVR  +V  +  +IN L+NL D     Y  M+   + + L   
Subjt:  ERGF---SGDL---PHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQDFPHAGYNEMVVAPSNEQLSDA

Query:  VREVGVEGAQWRLSKTEKRTFQSAYLKREANTWM-----------------------------SLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKR
        +  V   G+QW + K    + +  YLK  AN W                                SI+VGKII  EI  C KKK G ++FP+ IT LC +
Subjt:  VREVGVEGAQWRLSKTEKRTFQSAYLKREANTWM-----------------------------SLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKR

Query:  AGV
        A V
Subjt:  AGV

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.8e-2231.64Show/hide
Query:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN
        V+F    A  +Y   +  R    E+GF        G LP F+   IT H+W+ FC+  E     +VREFYAN+ +     V VRGV+V+WS  AINA++ 
Subjt:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE
        L D P   ++E +   +   L   +  V V GA+W +S     T   + L   A  W                             +  SI+VG++I SE
Subjt:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE

Query:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET
        I  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ ++  T
Subjt:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-2231.25Show/hide
Query:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN
        V+F    A  +Y   +  R    E+GF        G LP F+   IT H+W+ FC+  E     +VREFYAN+ + +   V VRGV+V+WS  AINA++ 
Subjt:  VRFVNNLARAKYA-ELLKRDFLFERGF-------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYN

Query:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE
        L D P   ++E +   + + L   +  V   GA+W +S     T   + L   A  W                             +  SI+VG++I SE
Subjt:  LQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASE

Query:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET
        I  C  +K G LFFP+ IT LC+ A  P    +  L + G ID   +AR+ ++  T
Subjt:  ISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQET

A0A2P5DAQ2 Uncharacterized protein4.6e-1729.07Show/hide
Query:  VRFVNNLARAKYAE-------LLKRDFLFERGFSGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNL
        V+F +  A  +Y E        ++++F+++     + P F+   I  H+W+LFC+  E     +VREFY N+   D   V +RGV+V  S  AIN +++L
Subjt:  VRFVNNLARAKYAE-------LLKRDFLFERGFSGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNL

Query:  QDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW---------------------MSL--------SIDVGKIIASEI
         D P   ++E V   +  +L   +  V + GA+W +S     T   + L   A  W                     +SL        SI+VG++I  EI
Subjt:  QDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW---------------------MSL--------SIDVGKIIASEI

Query:  SGCWKKKVGKLFFPNTITMLCKRAGVP
          C  +K G LFFP+ IT +C+    P
Subjt:  SGCWKKKVGKLFFPNTITMLCKRAGVP

A0A5D2MA47 Uncharacterized protein1.2e-1733.5Show/hide
Query:  ERGF---SGDL---PHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQDFPHAGYNEMVVAPSNEQLSDA
        E+GF   S DL   P  +R  I    WE FC+   F + ++VREFYA++  +D  +VIVR  +V  +  +IN L+NL D     Y  M+   + + L   
Subjt:  ERGF---SGDL---PHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQDFPHAGYNEMVVAPSNEQLSDA

Query:  VREVGVEGAQWRLSKTEKRTFQSAYLKREANTWM-----------------------------SLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKR
        +  V   G+QW + K    + +  YLK  AN W                                SI+VGKII  EI  C KKK G ++FP+ IT LC +
Subjt:  VREVGVEGAQWRLSKTEKRTFQSAYLKREANTWM-----------------------------SLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKR

Query:  AGV
        A V
Subjt:  AGV

A0A6A2WM54 Uncharacterized protein6.0e-1728.57Show/hide
Query:  RFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQD
        +F N+ A+A++     R   FE GF       G     +   +T   W+ F      VNA +V+EFYANI + + + + VRG ++ ++  AIN  ++LQD
Subjt:  RFVNNLARAKYAELLKRDFLFERGF------SGDLPHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQD

Query:  F--PHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASEI
            HA + E   A SN +    + ++  E  +W   +T + +     L+  A  W                             +S  IDVG II  ++
Subjt:  F--PHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSAYLKREANTW-----------------------------MSLSIDVGKIIASEI

Query:  SGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQETHQGGLVFGIHN
          C  KK   L FPN IT LC++  V EN  D IL        P L+ + R + T    L+ GI N
Subjt:  SGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQETHQGGLVFGIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GTAAAATGCATGGATGCTGCCACGTGTCGCACAGAGTCTCCGCTGGCGAAAACGAGAGCAAGAAAAGAGAGAGACAATGAGGAAGAGGAGGTGCCTGTTACCCCCGGAGT
ACAGAAAGCTAAGGCAAAGAAAAAGAAAACACCAGAAGAGAAAGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAACAGAGCAGAAGGTAGTCAAGG
AGGTTGCTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAGCCTGAAGGACAAAACCCAGAGCAGACTGAGCCGAGAGTTGCGGATAAGAGGAAGTTCGAGAGGAAAATA
CAGAGGAAGTCCGTGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGACTGAGGATGTGCAAGAAGAACATGCAGAGGTTGCGCCTGAAAAAGAAAAAAGAGGCCGAGGA
TAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAAAGGTTGCTCAAGCAAAGGGCAGAAAAGGGCAAGAGTGTTGCTGCAGCATCGGAGGAACCTGATGGGATAG
AAGAGCCACAGTTGCCGTATGTCCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTT
CCACATTTTCTGAGGGCCGACATTACGAACCACAGCTGGGAGTTGTTTTGTTCTAAGGCTGAATTTGTGAATGCGCAGGTAGTGCGCGAATTTTATGCAAATATTGACGA
GGAAGACGGTTTCCAAGTGATCGTTCGAGGTGTAGAGGTCAACTGGAGTCCTGGTGCTATTAATGCATTATATAACCTTCAAGATTTCCCACATGCAGGATACAATGAGA
TGGTCGTGGCGCCATCTAATGAGCAGTTGAGTGATGCTGTGAGGGAAGTTGGCGTTGAAGGGGCGCAGTGGAGACTTTCAAAGACTGAGAAAAGGACATTTCAGTCAGCC
TATCTTAAGAGAGAAGCAAATACATGGATGTCTCTCAGTATTGATGTAGGGAAGATTATTGCGAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTT
CCCGAATACTATTACAATGCTTTGCAAGAGAGCAGGGGTTCCGGAGAATGAAGGAGATGTCATTTTATTTGACAAGGGAATCATCGATACGCCTAACTTGGCACGGCTTC
AGCGTAAGCAAGAGACACACCAGGGTGGGCTTGTTTTTGGCATTCACAACATTTTAGAACAACTTGCACTGTCGGCCAGCAGCTTGGACTGGTTAAGCTTAATTAGATCA
AGAGCTAGGATGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAACTATTTTGCTGCAGCAGTCCTTGGTTTTGCAGAATGCTCAGA
ATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGCTGGAGCAAAGCTGGGAGCAAAACTGCCACGTCATAGCTCGTTAG
mRNA sequenceShow/hide mRNA sequence
GTAAAATGCATGGATGCTGCCACGTGTCGCACAGAGTCTCCGCTGGCGAAAACGAGAGCAAGAAAAGAGAGAGACAATGAGGAAGAGGAGGTGCCTGTTACCCCCGGAGT
ACAGAAAGCTAAGGCAAAGAAAAAGAAAACACCAGAAGAGAAAGAAGCTAAGAGGAGAAGAAGACAGCAGAGGGCTGAGGATCAAGAAACAGAGCAGAAGGTAGTCAAGG
AGGTTGCTGCCGAGGCAGTTGAAGAAGGCAATCCGAAGGAGCCTGAAGGACAAAACCCAGAGCAGACTGAGCCGAGAGTTGCGGATAAGAGGAAGTTCGAGAGGAAAATA
CAGAGGAAGTCCGTGAAGAAAATACAGAGGAAGTTCAAGAAAAACAGACTGAGGATGTGCAAGAAGAACATGCAGAGGTTGCGCCTGAAAAAGAAAAAAGAGGCCGAGGA
TAAAGCAAGAGAGGAAGCAGAGAAAAAGGCTGAAGAAGAAAGGTTGCTCAAGCAAAGGGCAGAAAAGGGCAAGAGTGTTGCTGCAGCATCGGAGGAACCTGATGGGATAG
AAGAGCCACAGTTGCCGTATGTCCGCTTCGTCAACAATCTTGCCAGAGCAAAATATGCTGAGCTGCTGAAGAGAGACTTCCTGTTTGAGAGAGGATTTAGTGGTGATCTT
CCACATTTTCTGAGGGCCGACATTACGAACCACAGCTGGGAGTTGTTTTGTTCTAAGGCTGAATTTGTGAATGCGCAGGTAGTGCGCGAATTTTATGCAAATATTGACGA
GGAAGACGGTTTCCAAGTGATCGTTCGAGGTGTAGAGGTCAACTGGAGTCCTGGTGCTATTAATGCATTATATAACCTTCAAGATTTCCCACATGCAGGATACAATGAGA
TGGTCGTGGCGCCATCTAATGAGCAGTTGAGTGATGCTGTGAGGGAAGTTGGCGTTGAAGGGGCGCAGTGGAGACTTTCAAAGACTGAGAAAAGGACATTTCAGTCAGCC
TATCTTAAGAGAGAAGCAAATACATGGATGTCTCTCAGTATTGATGTAGGGAAGATTATTGCGAGTGAAATATCTGGATGTTGGAAGAAGAAAGTGGGGAAGTTGTTTTT
CCCGAATACTATTACAATGCTTTGCAAGAGAGCAGGGGTTCCGGAGAATGAAGGAGATGTCATTTTATTTGACAAGGGAATCATCGATACGCCTAACTTGGCACGGCTTC
AGCGTAAGCAAGAGACACACCAGGGTGGGCTTGTTTTTGGCATTCACAACATTTTAGAACAACTTGCACTGTCGGCCAGCAGCTTGGACTGGTTAAGCTTAATTAGATCA
AGAGCTAGGATGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCCATGCCGGAAGAACTATTTTGCTGCAGCAGTCCTTGGTTTTGCAGAATGCTCAGA
ATATATTGCTGAGCGACTTGAGGGAGCAAAATCTGTGCTGGAGCAAAGCTGGGAGCAAAACTGCCACGTCATAGCTCGTTAG
Protein sequenceShow/hide protein sequence
VKCMDAATCRTESPLAKTRARKERDNEEEEVPVTPGVQKAKAKKKKTPEEKEAKRRRRQQRAEDQETEQKVVKEVAAEAVEEGNPKEPEGQNPEQTEPRVADKRKFERKI
QRKSVKKIQRKFKKNRLRMCKKNMQRLRLKKKKEAEDKAREEAEKKAEEERLLKQRAEKGKSVAAASEEPDGIEEPQLPYVRFVNNLARAKYAELLKRDFLFERGFSGDL
PHFLRADITNHSWELFCSKAEFVNAQVVREFYANIDEEDGFQVIVRGVEVNWSPGAINALYNLQDFPHAGYNEMVVAPSNEQLSDAVREVGVEGAQWRLSKTEKRTFQSA
YLKREANTWMSLSIDVGKIIASEISGCWKKKVGKLFFPNTITMLCKRAGVPENEGDVILFDKGIIDTPNLARLQRKQETHQGGLVFGIHNILEQLALSASSLDWLSLIRS
RARMWQVLRIELKVVIICPCRKNYFAAAVLGFAECSEYIAERLEGAKSVLEQSWEQNCHVIAR