; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001748 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001748
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF1713 domain-containing protein
Genome locationscaffold10:1661662..1662054
RNA-Seq ExpressionSpg001748
SyntenySpg001748
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
InterPro domainsIPR013177 - Mitochondrial mRNA-processing protein COX24, C-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650785.1 hypothetical protein Csa_017463 [Cucumis sativus]4.3e-5486.15Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MAS+LQ LIRK PPTR+IAALG+QT+QNLS P+ILHQPLD DKKPD HC+SN+NS STSNPS FS FYPSFPFGLCLPQISST L+PFEPD VEQDDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
KAG7017804.1 hypothetical protein SDJN02_19670, partial [Cucurbita argyrosperma subsp. argyrosperma]5.6e-5485.38Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MAS+LQKL+RK PPTR+IAALG+QT+QN   PYILHQPLD DKKPD HC+SNLNSVSTSNPS FSLFYPSFPFG CLPQISS+ ++PFEPD+VEQDDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_011651574.1 uncharacterized protein LOC101220058 [Cucumis sativus]4.3e-5486.15Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MAS+LQ LIRK PPTR+IAALG+QT+QNLS P+ILHQPLD DKKPD HC+SN+NS STSNPS FS FYPSFPFGLCLPQISST L+PFEPD VEQDDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_022928332.1 uncharacterized protein LOC111435191 [Cucurbita moschata]1.1e-5488.46Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MASILQKLIRK PPTR IAAL SQT+QNLS PYILHQPLDID+KPDGHC+SNLN+VSTSNPSQFSLF+PSFPFGLCL QISST  + FEPDYVE DDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
XP_023530210.1 uncharacterized protein LOC111792842 [Cucurbita pepo subsp. pepo]8.7e-5588.46Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MASILQKLIRK PPTR IAALGSQT+QNLS PYILHQPLDID+KPDGHC+SNLNSVSTSNPSQFSLF+PSFPFGLCL QI ST  + FEPDYVE+DD RK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
TrEMBL top hitse value%identityAlignment
A0A0A0LDP0 DUF1713 domain-containing protein2.1e-5486.15Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MAS+LQ LIRK PPTR+IAALG+QT+QNLS P+ILHQPLD DKKPD HC+SN+NS STSNPS FS FYPSFPFGLCLPQISST L+PFEPD VEQDDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A5A7UNU9 DUF1713 domain-containing protein2.7e-5486.92Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MAS+LQKLIRK PP+R+IAALG+QT+QNLS P+ILHQPLD DKK D H +SNLNS STSNPSQFS FYPSFPFGLCLPQISST L+PFEPDYVEQDDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1EJL0 uncharacterized protein LOC1114351915.5e-5588.46Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MASILQKLIRK PPTR IAAL SQT+QNLS PYILHQPLDID+KPDGHC+SNLN+VSTSNPSQFSLF+PSFPFGLCL QISST  + FEPDYVE DDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1F832 uncharacterized protein LOC1114417237.9e-5484.62Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MAS+LQKL+RK PPTR+IAALG+QT+QN   PYILHQPLD DKKPD HC+SNLNSVSTSNPS FSLFYPSFPFG CLPQISS+ ++PFEP++VEQDDSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
A0A6J1JQJ4 uncharacterized protein LOC1114865914.4e-5286.15Show/hide
Query:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK
        MASILQKLIRK PPTR IAALGSQT+QN S PYILHQPLDID+KPDGHC+SNLNSVSTS PSQFS F+PSFPFGL L QISST  + FEPDYVE++DSRK
Subjt:  MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRK

Query:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
Subjt:  LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63150.1 unknown protein1.3e-0845.16Show/hide
Query:  KKPDGHCNSN-LNSVSTSNPSQFSLFYPSFPFGLCL--PQISSTELVPFEPDYVEQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT
        +KPD    +N L ++S +  +Q   FYPSF  GLCL    I   +L        E++D+++  ++ADSVKKKRK+KMNKHKY+KLRK+L R++
Subjt:  KKPDGHCNSN-LNSVSTSNPSQFSLFYPSFPFGLCL--PQISSTELVPFEPDYVEQDDSRK--LWADSVKKKRKRKMNKHKYKKLRKRLRRQT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCGATTCTTCAAAAGCTCATCAGAAAACCGCCACCCACCAGAATAATCGCCGCTTTGGGTAGCCAGACCGCACAGAATCTCTCAGCACCCTACATTCTTCACCA
GCCGCTTGATATTGATAAGAAACCAGATGGGCATTGTAATTCTAATTTAAACTCTGTATCGACTTCAAATCCGTCTCAGTTTTCGCTGTTTTACCCCAGTTTTCCATTTG
GGCTTTGCTTGCCCCAAATCTCCTCAACTGAGTTGGTTCCGTTCGAGCCCGATTATGTTGAGCAAGATGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGA
AAACGGAAGATGAACAAGCACAAGTACAAGAAGCTAAGGAAGAGGCTCCGAAGACAGACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCGATTCTTCAAAAGCTCATCAGAAAACCGCCACCCACCAGAATAATCGCCGCTTTGGGTAGCCAGACCGCACAGAATCTCTCAGCACCCTACATTCTTCACCA
GCCGCTTGATATTGATAAGAAACCAGATGGGCATTGTAATTCTAATTTAAACTCTGTATCGACTTCAAATCCGTCTCAGTTTTCGCTGTTTTACCCCAGTTTTCCATTTG
GGCTTTGCTTGCCCCAAATCTCCTCAACTGAGTTGGTTCCGTTCGAGCCCGATTATGTTGAGCAAGATGATTCTCGGAAGTTGTGGGCTGATAGCGTGAAGAAGAAGAGA
AAACGGAAGATGAACAAGCACAAGTACAAGAAGCTAAGGAAGAGGCTCCGAAGACAGACATAG
Protein sequenceShow/hide protein sequence
MASILQKLIRKPPPTRIIAALGSQTAQNLSAPYILHQPLDIDKKPDGHCNSNLNSVSTSNPSQFSLFYPSFPFGLCLPQISSTELVPFEPDYVEQDDSRKLWADSVKKKR
KRKMNKHKYKKLRKRLRRQT