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Spg001753 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001753
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionF-box protein
Genome locationscaffold10:3644867..3645991
RNA-Seq ExpressionSpg001753
SyntenySpg001753
Gene Ontology termsNA
InterPro domainsIPR013187 - F-box associated domain, type 3
IPR017451 - F-box associated interaction domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004135796.1 putative F-box protein At1g46984 [Cucumis sativus]8.0e-2640.89Show/hide
Query:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY--------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYC
        D ++FG S  E   V S+P+ +N   GVYLNG LYW+G           Y  V+ R D++DEKFE+I  P  G     D   I  +N  +YL+F    + 
Subjt:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY--------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYC

Query:  LGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRP--YDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNI
          YH WKMEED+SW KEFV+ +P    + L   P  Y L++IK  EDG +LC+ + + LILYDP T+ +E L  +   ++ + + ++Q++SF+F+SL NI
Subjt:  LGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRP--YDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNI

Query:  LAG
        LAG
Subjt:  LAG

XP_008450717.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]8.3e-2337.56Show/hide
Query:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY---------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY
        D ++FG S  E   + S+P+ +N   GVY NG LYW+G            Y  VV R D+ DEKF++I +P  G E       +  +N  +YL+     +
Subjt:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY---------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY

Query:  CLGYHVWKMEEDYSWIKEFVIEMP--IVH-LYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQ
           YHVWKM+ED+SW KEFV+ +P  I+H L+      Y L+++K  EDG +LC+ + + LI+YDPKT+++E L ++   ++ + +  +Q++SF+F+SL 
Subjt:  CLGYHVWKMEEDYSWIKEFVIEMP--IVH-LYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQ

Query:  NILAG
        N L G
Subjt:  NILAG

XP_022143297.1 F-box/kelch-repeat protein At3g06240-like [Momordica charantia]2.6e-2436.27Show/hide
Query:  EATVDSDNWSFGGSVEEEESVSSLPHEINND--GVYLNGVLYWIG--CYGYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY
        +A +  + ++FG +  +   VS +P  ++ +   VY NG LYWIG       NV+ R D+E E+ +EI  P+ G      C SI  FN  +YL+  + +Y
Subjt:  EATVDSDNWSFGGSVEEEESVSSLPHEINND--GVYLNGVLYWIG--CYGYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY

Query:  CLGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETL-HEELADDLPKELRIYQLQSFNFSSLQNI
           YHVWKMEED+SW K F + +P +++++       L++I+  +DGK+LC++S + LILY+ KT+++E+L ++ L        +++++ SFNF SL  I
Subjt:  CLGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETL-HEELADDLPKELRIYQLQSFNFSSLQNI

Query:  LAGD
        L GD
Subjt:  LAGD

XP_022961426.1 F-box protein At3g07870-like [Cucurbita moschata]4.1e-2237.93Show/hide
Query:  GVYLNGVLYWIGCYG-YENVVVRFDVEDEKFEEIYLPKVGREMNKD----CVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVIEMPIVHLYY
        GVYLNG L+W+G    + +V+ R ++EDEK++ I  P      N D    C+ ++    H+ LS    +Y +    WKM+ED SWIK F + +P V    
Subjt:  GVYLNGVLYWIGCYG-YENVVVRFDVEDEKFEEIYLPKVGREMNKD----CVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVIEMPIVHLYY

Query:  LFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNILAGDV
        L + P  +E IK  +DGK+LCV +   L+LYDPKT K+E L   + D + ++  ++ ++SFNF++L +IL G +
Subjt:  LFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNILAGDV

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]1.0e-2843.56Show/hide
Query:  WSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY-----GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYCLG---
        ++FG S  E   V S+P+ +N   GVY NG LYW+G       G  +V+ R D+ED+KF++I  P  G +   D   I  +N  +YL+      C G   
Subjt:  WSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY-----GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYCLG---

Query:  YHVWKMEEDYSWIKEFVIEMP-IVHLYYLFWRP--YDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNIL
        YHVWKMEED+SWIKEFV+ +P  VH       P  Y L++IK  EDG +LC+ + + LILYDPKT   E L ++   ++ K + +YQ+ SFNF+SL NIL
Subjt:  YHVWKMEEDYSWIKEFVIEMP-IVHLYYLFWRP--YDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNIL

Query:  AG
        AG
Subjt:  AG

TrEMBL top hitse value%identityAlignment
A0A0A0M1M5 F-box domain-containing protein3.9e-2640.89Show/hide
Query:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY--------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYC
        D ++FG S  E   V S+P+ +N   GVYLNG LYW+G           Y  V+ R D++DEKFE+I  P  G     D   I  +N  +YL+F    + 
Subjt:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY--------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYC

Query:  LGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRP--YDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNI
          YH WKMEED+SW KEFV+ +P    + L   P  Y L++IK  EDG +LC+ + + LILYDP T+ +E L  +   ++ + + ++Q++SF+F+SL NI
Subjt:  LGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRP--YDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNI

Query:  LAG
        LAG
Subjt:  LAG

A0A1S3BQV8 putative F-box protein At3g211204.0e-2337.56Show/hide
Query:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY---------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY
        D ++FG S  E   + S+P+ +N   GVY NG LYW+G            Y  VV R D+ DEKF++I +P  G E       +  +N  +YL+     +
Subjt:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY---------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY

Query:  CLGYHVWKMEEDYSWIKEFVIEMP--IVH-LYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQ
           YHVWKM+ED+SW KEFV+ +P  I+H L+      Y L+++K  EDG +LC+ + + LI+YDPKT+++E L ++   ++ + +  +Q++SF+F+SL 
Subjt:  CLGYHVWKMEEDYSWIKEFVIEMP--IVH-LYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQ

Query:  NILAG
        N L G
Subjt:  NILAG

A0A5D3CIX9 Putative F-box protein4.0e-2337.56Show/hide
Query:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY---------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY
        D ++FG S  E   + S+P+ +N   GVY NG LYW+G            Y  VV R D+ DEKF++I +P  G E       +  +N  +YL+     +
Subjt:  DNWSFGGSVEEEESVSSLPHEINN-DGVYLNGVLYWIGCY---------GYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY

Query:  CLGYHVWKMEEDYSWIKEFVIEMP--IVH-LYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQ
           YHVWKM+ED+SW KEFV+ +P  I+H L+      Y L+++K  EDG +LC+ + + LI+YDPKT+++E L ++   ++ + +  +Q++SF+F+SL 
Subjt:  CLGYHVWKMEEDYSWIKEFVIEMP--IVH-LYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQ

Query:  NILAG
        N L G
Subjt:  NILAG

A0A6J1CQE2 F-box/kelch-repeat protein At3g06240-like1.2e-2436.27Show/hide
Query:  EATVDSDNWSFGGSVEEEESVSSLPHEINND--GVYLNGVLYWIG--CYGYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY
        +A +  + ++FG +  +   VS +P  ++ +   VY NG LYWIG       NV+ R D+E E+ +EI  P+ G      C SI  FN  +YL+  + +Y
Subjt:  EATVDSDNWSFGGSVEEEESVSSLPHEINND--GVYLNGVLYWIG--CYGYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQY

Query:  CLGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETL-HEELADDLPKELRIYQLQSFNFSSLQNI
           YHVWKMEED+SW K F + +P +++++       L++I+  +DGK+LC++S + LILY+ KT+++E+L ++ L        +++++ SFNF SL  I
Subjt:  CLGYHVWKMEEDYSWIKEFVIEMPIVHLYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETL-HEELADDLPKELRIYQLQSFNFSSLQNI

Query:  LAGD
        L GD
Subjt:  LAGD

A0A6J1HAC0 F-box protein At3g07870-like2.0e-2237.93Show/hide
Query:  GVYLNGVLYWIGCYG-YENVVVRFDVEDEKFEEIYLPKVGREMNKD----CVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVIEMPIVHLYY
        GVYLNG L+W+G    + +V+ R ++EDEK++ I  P      N D    C+ ++    H+ LS    +Y +    WKM+ED SWIK F + +P V    
Subjt:  GVYLNGVLYWIGCYG-YENVVVRFDVEDEKFEEIYLPKVGREMNKD----CVSIWEFNRHVYLSFFELQYCLGYHVWKMEEDYSWIKEFVIEMPIVHLYY

Query:  LFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNILAGDV
        L + P  +E IK  +DGK+LCV +   L+LYDPKT K+E L   + D + ++  ++ ++SFNF++L +IL G +
Subjt:  LFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNILAGDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGGCAGCGGCAGTGATCGGCAGGAAGCGACGGTCGACAGCGACAACTGGAGCTTTGGTGGGAGTGTTGAAGAAGAAGAAAGCGTTTCCTCACTGCCGCATGAGAT
CAACAACGATGGTGTTTACTTGAATGGAGTCCTTTATTGGATTGGATGTTACGGATACGAGAACGTCGTCGTACGTTTCGATGTAGAAGATGAGAAATTTGAGGAAATTT
ATCTTCCCAAAGTTGGGCGAGAGATGAACAAAGATTGTGTGAGCATTTGGGAGTTTAATAGGCATGTCTATCTGTCTTTTTTCGAGTTGCAATACTGTTTGGGGTATCAT
GTGTGGAAGATGGAAGAAGATTATTCATGGATTAAGGAATTTGTTATTGAAATGCCGATTGTTCATCTTTATTATCTGTTTTGGAGACCATATGATCTAGAAATCATCAA
AGGTTTGGAAGATGGGAAGCTCTTGTGTGTTGTGTCAAGAATGAGTTTAATCTTGTATGACCCTAAGACTAGGAAGATTGAGACATTGCATGAAGAGTTAGCTGATGACC
TTCCGAAAGAGTTACGGATTTATCAACTTCAGTCCTTCAATTTTTCTTCTCTCCAAAACATTTTGGCTGGAGACGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGGCAGCGGCAGTGATCGGCAGGAAGCGACGGTCGACAGCGACAACTGGAGCTTTGGTGGGAGTGTTGAAGAAGAAGAAAGCGTTTCCTCACTGCCGCATGAGAT
CAACAACGATGGTGTTTACTTGAATGGAGTCCTTTATTGGATTGGATGTTACGGATACGAGAACGTCGTCGTACGTTTCGATGTAGAAGATGAGAAATTTGAGGAAATTT
ATCTTCCCAAAGTTGGGCGAGAGATGAACAAAGATTGTGTGAGCATTTGGGAGTTTAATAGGCATGTCTATCTGTCTTTTTTCGAGTTGCAATACTGTTTGGGGTATCAT
GTGTGGAAGATGGAAGAAGATTATTCATGGATTAAGGAATTTGTTATTGAAATGCCGATTGTTCATCTTTATTATCTGTTTTGGAGACCATATGATCTAGAAATCATCAA
AGGTTTGGAAGATGGGAAGCTCTTGTGTGTTGTGTCAAGAATGAGTTTAATCTTGTATGACCCTAAGACTAGGAAGATTGAGACATTGCATGAAGAGTTAGCTGATGACC
TTCCGAAAGAGTTACGGATTTATCAACTTCAGTCCTTCAATTTTTCTTCTCTCCAAAACATTTTGGCTGGAGACGTTTGA
Protein sequenceShow/hide protein sequence
MVGSGSDRQEATVDSDNWSFGGSVEEEESVSSLPHEINNDGVYLNGVLYWIGCYGYENVVVRFDVEDEKFEEIYLPKVGREMNKDCVSIWEFNRHVYLSFFELQYCLGYH
VWKMEEDYSWIKEFVIEMPIVHLYYLFWRPYDLEIIKGLEDGKLLCVVSRMSLILYDPKTRKIETLHEELADDLPKELRIYQLQSFNFSSLQNILAGDV