; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001756 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001756
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDUF4283 domain-containing protein
Genome locationscaffold10:182644..185400
RNA-Seq ExpressionSpg001756
SyntenySpg001756
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0004518 - nuclease activity (molecular function)
InterPro domainsIPR004808 - AP endonuclease 1
IPR025558 - Domain of unknown function DUF4283
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0039967.1 hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]1.7e-2642.14Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P +ADKAL+  ++EEQA++L K +GW TVG++ ++F  WS +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI
        T    D+ E  IKIK+N +GFIPA I L     +   V++
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI

KAA0040039.1 hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]7.5e-2742.86Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P  ADKAL+  ++EEQA++L K +GW TVG++ ++F  WS +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI
        T    D+ E  IKIK+N TGFIPA I L     +   V++
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI

KAA0050054.1 hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]1.3e-2634.91Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P  ADKAL+  ++EEQA ++ K +GW TVG++ ++F  W+ +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID
        T    D++E  I+IK+N +GFIPA I L     +   +++      ++ +     +HG        R D
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID

RVW33882.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]2.5e-3036.87Show/hide
Query:  VISWNIRGMGSWKKRALIKDFLTSHNPTLVILQETKMANINRKIIKSIWSSRNIAWATIDAVGAFGGIIILWNESVFDVKEVVEDAREEHGLLSVQDAHR
        ++SWN+RG+GS  KR ++KDFL S NP +V++QETK    +R+ + SIW+ RN  W  + A GA GGI+I+W+  +         +REE  L        
Subjt:  VISWNIRGMGSWKKRALIKDFLTSHNPTLVILQETKMANINRKIIKSIWSSRNIAWATIDAVGAFGGIIILWNESVFDVKEVVEDAREEHGLLSVQDAHR

Query:  RNDIKAQLILLSANEEILWRQKCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKLYSKNHNKAPFPQIDEWNPI
            K +L +L   EEI WRQK K+KW++EGD NS F+H++    R +  I E+ ++ G  L     I +E + +++KLY+    ++   +  +W+PI
Subjt:  RNDIKAQLILLSANEEILWRQKCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKLYSKNHNKAPFPQIDEWNPI

TYK10355.1 hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]1.3e-2634.91Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P  ADKAL+  ++EEQA ++ K +GW TVG++ ++F  W+ +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID
        T    D++E  I+IK+N +GFIPA I L     +   +++      ++ +     +HG        R D
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID

TrEMBL top hitse value%identityAlignment
A0A438DEJ4 Transposon TX1 uncharacterized 149 kDa protein1.2e-3036.87Show/hide
Query:  VISWNIRGMGSWKKRALIKDFLTSHNPTLVILQETKMANINRKIIKSIWSSRNIAWATIDAVGAFGGIIILWNESVFDVKEVVEDAREEHGLLSVQDAHR
        ++SWN+RG+GS  KR ++KDFL S NP +V++QETK    +R+ + SIW+ RN  W  + A GA GGI+I+W+  +         +REE  L        
Subjt:  VISWNIRGMGSWKKRALIKDFLTSHNPTLVILQETKMANINRKIIKSIWSSRNIAWATIDAVGAFGGIIILWNESVFDVKEVVEDAREEHGLLSVQDAHR

Query:  RNDIKAQLILLSANEEILWRQKCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKLYSKNHNKAPFPQIDEWNPI
            K +L +L   EEI WRQK K+KW++EGD NS F+H++    R +  I E+ ++ G  L     I +E + +++KLY+    ++   +  +W+PI
Subjt:  RNDIKAQLILLSANEEILWRQKCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKLYSKNHNKAPFPQIDEWNPI

A0A5A7TEK8 DUF4283 domain-containing protein8.1e-2742.14Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P +ADKAL+  ++EEQA++L K +GW TVG++ ++F  WS +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI
        T    D+ E  IKIK+N +GFIPA I L     +   V++
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI

A0A5A7TFK7 DUF4283 domain-containing protein3.7e-2742.86Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P  ADKAL+  ++EEQA++L K +GW TVG++ ++F  WS +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI
        T    D+ E  IKIK+N TGFIPA I L     +   V++
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKI

A0A5A7U495 DUF4283 domain-containing protein6.2e-2734.91Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P  ADKAL+  ++EEQA ++ K +GW TVG++ ++F  W+ +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID
        T    D++E  I+IK+N +GFIPA I L     +   +++      ++ +     +HG        R D
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID

A0A5D3CFS8 DUF4283 domain-containing protein6.2e-2734.91Show/hide
Query:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK
        L + L       P  ADKAL+  ++EEQA ++ K +GW TVG++ ++F  W+ +       +PSYGGWIK+R +PL  WN+++F +IGD CGG++  A +
Subjt:  LQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANK

Query:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID
        T    D++E  I+IK+N +GFIPA I L     +   +++      ++ +     +HG        R D
Subjt:  TLARMDMMEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRID

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G43760.1 DNAse I-like superfamily protein2.7e-0632.81Show/hide
Query:  EILWRQKCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKL
        E  +RQK ++KWL++GD N+ FFH+++ A++ KN I  +  D    +     +++  +A+Y  L
Subjt:  EILWRQKCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAGCTCTGCAACAACATCTATCCGCCTACGCATCCATCAGCCCACTCCAAGCTGATAAAGCTCTCCTAGCTTGTGAAGATGAAGAACAAGCTCGCGTCTTAGCCAA
AATTAGAGGATGGTACACGGTAGGGAAATATCAGCTTCAGTTTTATCTCTGGAGTGCCGAAGTCATGAATGGGGAGCCAAAGGTCCCATCGTATGGAGGCTGGATTAAGA
TCAGAAATTTGCCTCTTGATCAATGGAACATCGACACCTTCCGGAAAATTGGTGATGAATGTGGAGGATACCTAAACACTGCCAACAAAACCTTAGCTCGAATGGACATG
ATGGAGGTCTGTATTAAGATCAAGGAAAACAGTACGGGTTTCATTCCAGCTGAAATACACCTTCCTTCATCATCTACTAATCCCACGTTCGTAAAGATTGACCCCTTCTT
CATGGAGGAATACTGCATCGGGTATTTAGCCGGCGTTCATGGCAAAATACCATCCCTCACGGTGAATCGAATCGATGCTAGGGAAGAAGATGTTCGCCCATGCACTGCCC
TGCGCGATGAAATGTACCCTGCTGCCGATTTGACCACAGATGAATATACAGAGAGGGCCCCACATGTAACCTCATCTTCAAAGGAACCCCAATCCCCAAAATCCCCTCTC
ATCAGTCAAGATGGGACCCACCCACCAAAAGCCCCCTACAAAATTACCTCCTCAGACCCAATCCGTAAAAGCCCACAAACAACCCACCCTCAGACTGACACCCAACCCAT
CATTTACCCTCTTGCTAACCCTACCCTACGCCCTGATAACCTTTCAAACAGGAAAAAGCTTGTAATTATCAATGATAAGGAAACCTTTCTCCTCACCGACACCAAGTACT
CCACCAATACTGAAGGCCCTCTATCCGATTTGGAAGGTGGAGCCTCATCCCCTTGTTCTACACCCATGGACGAATCACCCATGGCCGACAGAAGTAGTCCCCCAAACGAT
TCACCACCAACCATCCGCAAGCTTTTTGAAGAATATCCTGAGCAACAGTATCAGTTTGAGCAACCTCTTCCTCTGAGAATTGAAGAGCCAAATTACAGGAACTCTAACCC
AATCATCGATAAGGAAGACAAATCTCTTATTGAAATCAGTGTGGAAGAAGAAGATCTTGATGACCTATGCACAGAGGAAGCTAAAACTGATCCCGCGGTGTATCTTCCCA
TTTTATTTCCTTGGCTAGCCGAACATGAAATCAACAGCAGGCTACCTCACGGGAGGGTCGACAGAACCAATATGATTGTTATCTCCTGGAATATCCGAGGAATGGGCTCC
TGGAAAAAAAGAGCTCTTATCAAAGATTTTCTTACCTCCCATAATCCAACACTGGTGATTCTACAAGAAACTAAAATGGCGAATATCAACAGGAAGATTATTAAGTCCAT
TTGGAGCTCCAGAAACATAGCCTGGGCCACTATCGACGCAGTAGGAGCTTTCGGTGGAATTATTATCCTTTGGAATGAATCTGTCTTTGATGTGAAGGAGGTTGTCGAAG
ATGCGAGGGAGGAGCATGGACTGTTATCTGTTCAAGATGCACACCGAAGAAATGATATTAAAGCCCAACTTATTTTGTTATCAGCCAATGAGGAGATCTTGTGGCGTCAG
AAATGTAAGCTAAAATGGCTGAGAGAGGGTGATGTCAATTCGGCCTTTTTCCATAGAATAATGGCAGCTCATAGACGAAAAAACTCTATTATGGAAATTGTCTCTGATTC
TGGAACTAGCCTCACGTATGATAATGATATTGAGAAGGAGTTTATAGCTTTTTATCAAAAGCTATACTCCAAAAATCACAATAAGGCCCCCTTCCCACAGATTGACGAAT
GGAATCCTATTACAGTTGACCAAAGGGATATGCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGAGCTCTGCAACAACATCTATCCGCCTACGCATCCATCAGCCCACTCCAAGCTGATAAAGCTCTCCTAGCTTGTGAAGATGAAGAACAAGCTCGCGTCTTAGCCAA
AATTAGAGGATGGTACACGGTAGGGAAATATCAGCTTCAGTTTTATCTCTGGAGTGCCGAAGTCATGAATGGGGAGCCAAAGGTCCCATCGTATGGAGGCTGGATTAAGA
TCAGAAATTTGCCTCTTGATCAATGGAACATCGACACCTTCCGGAAAATTGGTGATGAATGTGGAGGATACCTAAACACTGCCAACAAAACCTTAGCTCGAATGGACATG
ATGGAGGTCTGTATTAAGATCAAGGAAAACAGTACGGGTTTCATTCCAGCTGAAATACACCTTCCTTCATCATCTACTAATCCCACGTTCGTAAAGATTGACCCCTTCTT
CATGGAGGAATACTGCATCGGGTATTTAGCCGGCGTTCATGGCAAAATACCATCCCTCACGGTGAATCGAATCGATGCTAGGGAAGAAGATGTTCGCCCATGCACTGCCC
TGCGCGATGAAATGTACCCTGCTGCCGATTTGACCACAGATGAATATACAGAGAGGGCCCCACATGTAACCTCATCTTCAAAGGAACCCCAATCCCCAAAATCCCCTCTC
ATCAGTCAAGATGGGACCCACCCACCAAAAGCCCCCTACAAAATTACCTCCTCAGACCCAATCCGTAAAAGCCCACAAACAACCCACCCTCAGACTGACACCCAACCCAT
CATTTACCCTCTTGCTAACCCTACCCTACGCCCTGATAACCTTTCAAACAGGAAAAAGCTTGTAATTATCAATGATAAGGAAACCTTTCTCCTCACCGACACCAAGTACT
CCACCAATACTGAAGGCCCTCTATCCGATTTGGAAGGTGGAGCCTCATCCCCTTGTTCTACACCCATGGACGAATCACCCATGGCCGACAGAAGTAGTCCCCCAAACGAT
TCACCACCAACCATCCGCAAGCTTTTTGAAGAATATCCTGAGCAACAGTATCAGTTTGAGCAACCTCTTCCTCTGAGAATTGAAGAGCCAAATTACAGGAACTCTAACCC
AATCATCGATAAGGAAGACAAATCTCTTATTGAAATCAGTGTGGAAGAAGAAGATCTTGATGACCTATGCACAGAGGAAGCTAAAACTGATCCCGCGGTGTATCTTCCCA
TTTTATTTCCTTGGCTAGCCGAACATGAAATCAACAGCAGGCTACCTCACGGGAGGGTCGACAGAACCAATATGATTGTTATCTCCTGGAATATCCGAGGAATGGGCTCC
TGGAAAAAAAGAGCTCTTATCAAAGATTTTCTTACCTCCCATAATCCAACACTGGTGATTCTACAAGAAACTAAAATGGCGAATATCAACAGGAAGATTATTAAGTCCAT
TTGGAGCTCCAGAAACATAGCCTGGGCCACTATCGACGCAGTAGGAGCTTTCGGTGGAATTATTATCCTTTGGAATGAATCTGTCTTTGATGTGAAGGAGGTTGTCGAAG
ATGCGAGGGAGGAGCATGGACTGTTATCTGTTCAAGATGCACACCGAAGAAATGATATTAAAGCCCAACTTATTTTGTTATCAGCCAATGAGGAGATCTTGTGGCGTCAG
AAATGTAAGCTAAAATGGCTGAGAGAGGGTGATGTCAATTCGGCCTTTTTCCATAGAATAATGGCAGCTCATAGACGAAAAAACTCTATTATGGAAATTGTCTCTGATTC
TGGAACTAGCCTCACGTATGATAATGATATTGAGAAGGAGTTTATAGCTTTTTATCAAAAGCTATACTCCAAAAATCACAATAAGGCCCCCTTCCCACAGATTGACGAAT
GGAATCCTATTACAGTTGACCAAAGGGATATGCTTTAA
Protein sequenceShow/hide protein sequence
MRALQQHLSAYASISPLQADKALLACEDEEQARVLAKIRGWYTVGKYQLQFYLWSAEVMNGEPKVPSYGGWIKIRNLPLDQWNIDTFRKIGDECGGYLNTANKTLARMDM
MEVCIKIKENSTGFIPAEIHLPSSSTNPTFVKIDPFFMEEYCIGYLAGVHGKIPSLTVNRIDAREEDVRPCTALRDEMYPAADLTTDEYTERAPHVTSSSKEPQSPKSPL
ISQDGTHPPKAPYKITSSDPIRKSPQTTHPQTDTQPIIYPLANPTLRPDNLSNRKKLVIINDKETFLLTDTKYSTNTEGPLSDLEGGASSPCSTPMDESPMADRSSPPND
SPPTIRKLFEEYPEQQYQFEQPLPLRIEEPNYRNSNPIIDKEDKSLIEISVEEEDLDDLCTEEAKTDPAVYLPILFPWLAEHEINSRLPHGRVDRTNMIVISWNIRGMGS
WKKRALIKDFLTSHNPTLVILQETKMANINRKIIKSIWSSRNIAWATIDAVGAFGGIIILWNESVFDVKEVVEDAREEHGLLSVQDAHRRNDIKAQLILLSANEEILWRQ
KCKLKWLREGDVNSAFFHRIMAAHRRKNSIMEIVSDSGTSLTYDNDIEKEFIAFYQKLYSKNHNKAPFPQIDEWNPITVDQRDML