; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001794 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001794
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold10:2676215..2685783
RNA-Seq ExpressionSpg001794
SyntenySpg001794
Gene Ontology termsGO:0050789 - regulation of biological process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsIPR026960 - Reverse transcriptase zinc-binding domain
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]7.1e-6146.47Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  EW  + + GASGG+LVMWD   ++  EV+LG FSVS+K      +  W++  YGP     R++FW EL  ++GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  GGR + S+K  +++I +    DPPL +  FTW+N +      R+DR L S  W   F    Q + PR TSDHWP++L S P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK SF SWW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]3.1e-2431.58Show/hide
Query:  IAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIP-NLFGPFCCILCRMAEEDLDHM
        +  S +  D R WS   S  F+ +SFF   L  +S  PS+F  +L+W  +VP K++ F+W V H +VNT D L  + P     P  C+LC    E +DH+
Subjt:  IAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIP-NLFGPFCCILCRMAEEDLDHM

Query:  LWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVWSLVKYNVSLWASVTRLFCNY
          +C+    +W   F    + +   R + + I          ++G  LWQ    AI+W +W ERN R F    ++   +W ++ +  SLW S +++F   
Subjt:  LWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVWSLVKYNVSLWASVTRLFCNY

Query:  SLGLIILDW
         L +I LDW
Subjt:  SLGLIILDW

RVW20303.1 Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]4.6e-6045.23Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK      +  W++  YGP     R++ W EL  + GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  G R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q + PR TSDHWP++L + P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK +F  WW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]6.7e-2732.19Show/hide
Query:  FGFVRPLSDRETTDLVTLLSLIGEIAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRK
        F F R LSD E  DL  L+     +  S++  D R WS   S  F+ +SFF   L   S  P IF    +W  +VP KV+ F+W V H +VNT D L  +
Subjt:  FGFVRPLSDRETTDLVTLLSLIGEIAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRK

Query:  IP-NLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDP
         P     P  C LC    E +DH+  +C+    +W   F S  + +   R + + +        F ++G  LWQ    A++W +W ERN R F    R+ 
Subjt:  IP-NLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDP

Query:  IEVWSLVKYNVSLWASVTRLFCNYSLGLIILDW
          +W  + +  S WA  +++F    L ++ LDW
Subjt:  IEVWSLVKYNVSLWASVTRLFCNYSLGLIILDW

RVW70235.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]4.6e-6045.23Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK      +  W++  YGP     R++ W EL  + GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  G R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q + PR TSDHWP++L + P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK +F  WW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

RVX13544.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]7.8e-6045.23Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK      +  W++  YGP     R++ W EL  + GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  G R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q + PR TSDHWP++L + P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK +F  WW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

XP_028075126.1 uncharacterized protein LOC114277426 [Camellia sinensis]8.6e-6749.79Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK  + +R FIRS+WG R   W  + S G SGG+L+MWD   V+  EV++GVFS+SIK + +D    W+TG YGP RP  RQ++W+ELG L+GLC  +
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWAN---SRARSRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+  DFNVVR  SEK +G   ++S++ F+ +I +C   DPPLSN RFTW+N   +R   R+DR L + GW + F  +R+ + PRV SDH+P+IL S P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWAN---SRARSRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL++ SFK  F  WW       WEG++F+
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

TrEMBL top hitse value%identityAlignment
A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein3.4e-6146.47Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  EW  + + GASGG+LVMWD   ++  EV+LG FSVS+K      +  W++  YGP     R++FW EL  ++GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  GGR + S+K  +++I +    DPPL +  FTW+N +      R+DR L S  W   F    Q + PR TSDHWP++L S P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK SF SWW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein1.5e-2431.58Show/hide
Query:  IAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIP-NLFGPFCCILCRMAEEDLDHM
        +  S +  D R WS   S  F+ +SFF   L  +S  PS+F  +L+W  +VP K++ F+W V H +VNT D L  + P     P  C+LC    E +DH+
Subjt:  IAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIP-NLFGPFCCILCRMAEEDLDHM

Query:  LWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVWSLVKYNVSLWASVTRLFCNY
          +C+    +W   F    + +   R + + I          ++G  LWQ    AI+W +W ERN R F    ++   +W ++ +  SLW S +++F   
Subjt:  LWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDPIEVWSLVKYNVSLWASVTRLFCNY

Query:  SLGLIILDW
         L +I LDW
Subjt:  SLGLIILDW

A0A438CAL5 Transposon TX1 uncharacterized 149 kDa protein2.2e-6045.23Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK      +  W++  YGP     R++ W EL  + GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  G R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q + PR TSDHWP++L + P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK +F  WW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein2.2e-6045.23Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK      +  W++  YGP     R++ W EL  + GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  G R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q + PR TSDHWP++L + P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK +F  WW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein3.2e-2732.19Show/hide
Query:  FGFVRPLSDRETTDLVTLLSLIGEIAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRK
        F F R LSD E  DL  L+     +  S++  D R WS   S  F+ +SFF   L   S  P IF    +W  +VP KV+ F+W V H +VNT D L  +
Subjt:  FGFVRPLSDRETTDLVTLLSLIGEIAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIF--SLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRK

Query:  IP-NLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDP
         P     P  C LC    E +DH+  +C+    +W   F S  + +   R + + +        F ++G  LWQ    A++W +W ERN R F    R+ 
Subjt:  IP-NLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDP

Query:  IEVWSLVKYNVSLWASVTRLFCNYSLGLIILDW
          +W  + +  S WA  +++F    L ++ LDW
Subjt:  IEVWSLVKYNVSLWASVTRLFCNYSLGLIILDW

A0A438GDE7 LINE-1 retrotransposable element ORF2 protein3.8e-6045.23Show/hide
Query:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH
        +ETK+ + +R F+ S+W  R  +W  + + GASGG+L++WD   ++  EVMLG FSVSIK      +  W++  YGP     R++ W EL  + GL    
Subjt:  EETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHH

Query:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ
        WC+ GDFNV+R  SEK  G R + S+K F+++I DC   D PL +  FTW+N +      R+DR L S  W  TF    Q + PR TSDHWP++L + P 
Subjt:  WCILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRAR---SRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQ

Query:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        KWGP PFRFENMWL HPSFK +F  WW       WEG++FM
Subjt:  KWGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

A0A4Y1RS61 TatD related DNase6.5e-6046.25Show/hide
Query:  ETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHW
        ETK+   +R+ +  +WG R  EW    S+G SGG+ V+W+  SV+ ++ M+G FSVSI+I        W++G YGP R + R  FW EL  LYG CG  W
Subjt:  ETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHW

Query:  CILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARS---RIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQK
        C+ GDFNVVR  +EK++ GR +KS++ FN++I++ +  DP L N  FTW+N R  +   R+DR L S  W D F   R    PR+TSDH P+ L +   K
Subjt:  CILGDFNVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARS---RIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQK

Query:  WGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM
        WGP PFRFENMWL HP FK     WW+ +    WEGY+FM
Subjt:  WGPCPFRFENMWLDHPSFKSSFPSWWNVEAPGKWEGYRFM

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657504.4e-0529.91Show/hide
Query:  TTRKDFRVWSPDPSLGFSCRSFFRCLL---DPVSSQPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNC
        T  +D   W       FS RS +  L     P  +  S F+ LWKV+VP++V+ F+W V +  V T +   R+  +L     C +C+   E + H+L +C
Subjt:  TTRKDFRVWSPDPSLGFSCRSFFRCLL---DPVSSQPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNC

Query:  AFARTVW
             +W
Subjt:  AFARTVW

Arabidopsis top hitse value%identityAlignment
AT2G02520.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein2.8e-0724.12Show/hide
Query:  LDPVSSQPSIFSLLW-KVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGL--QFARHRGLRE
        L+P+  +   F  +W K K+PK   F  W  +  R++T DR+         P  C+ C   +E   H+ ++C FAR VW  F     +        G+R 
Subjt:  LDPVSSQPSIFSLLW-KVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGL--QFARHRGLRE

Query:  TIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDP----IEVWSLVKYNVSLWASVTRL
            +L +P   +    + +    A ++ +W ERN R      R      +E+ S+++ ++   +   RL
Subjt:  TIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRGLERDP----IEVWSLVKYNVSLWASVTRL

AT2G02650.1 Ribonuclease H-like superfamily protein7.4e-0823.36Show/hide
Query:  LDPVSSQPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETID
        + P      +   +WK+ V  K++ F+W+ + G + T  RL  +  N+     C  C + EE + H+++NC + ++VW       G Q+       + ++
Subjt:  LDPVSSQPSIFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETID

Query:  EFLPHPPFREQG---KFL--WQAGICAIIWGLWGERN
          +     +      +FL  W      I+W LW  RN
Subjt:  EFLPHPPFREQG---KFL--WQAGICAIIWGLWGERN

AT2G34320.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-0424.58Show/hide
Query:  NLFGPFCCILCRMAEEDLDHMLWNCAFARTVWD----EFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFL-WQAGICAIIWGLWGERNNRTFRGLER
        +LF    C+ C  + E ++H+L+ C FAR VW       +       + +  L   ++  +  P   + G  + W      ++W LW  RN   F+G E 
Subjt:  NLFGPFCCILCRMAEEDLDHMLWNCAFARTVWD----EFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFL-WQAGICAIIWGLWGERNNRTFRGLER

Query:  DPIEVWSLVKYNVSLWAS
        D  EV      +   W++
Subjt:  DPIEVWSLVKYNVSLWAS

AT4G29090.1 Ribonuclease H-like superfamily protein5.1e-0924.04Show/hide
Query:  LIGEIAFSTTR-KDFRVWSPDPSLGFSCRSFFRCLLDPVS--------SQPS---IFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCC
        LIGE+     R  D   W    S  ++ +S +  L   ++        S+PS   I+  +WK +   K+Q F+W+ +   +     L+ +  +L     C
Subjt:  LIGEIAFSTTR-KDFRVWSPDPSLGFSCRSFFRCLLDPVS--------SQPS---IFSLLWKVKVPKKVQFFIWQVIHGRVNTLDRLSRKIPNLFGPFCC

Query:  ILCRMAEEDLDHMLWNCAFARTVW--DEFFGSFGLQFAR--HRGLRETIDEFLPHPPFREQGKFL-WQAGICAIIWGLWGERNNRTFRGLERDPIEVWSL
        I C   +E ++H+L+ C FAR  W         G ++A   +  L    +    +P + +  + + W      ++W LW  RN   FRG E +  EV   
Subjt:  ILCRMAEEDLDHMLWNCAFARTVW--DEFFGSFGLQFAR--HRGLRETIDEFLPHPPFREQGKFL-WQAGICAIIWGLWGERNNRTFRGLERDPIEVWSL

Query:  VKYNVSLW
         + ++  W
Subjt:  VKYNVSLW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGATCTTCGTCCTTACATCCCATTAGCTAGGCATTCTGTTTTGCTGATATTAATACCAATCAAGGCCGCTTTTGATAAGTTTAGTGAGAGCCCTGCTCTAGCAAT
TAGCAAGAAAGAGGTTAAGAATAAACCACCAATTTCTCAACATACCTCTATTTTCAGGACAAATAAGGAGGGTATTATCAGCATATTGTTGGTGAACATCGATTGGAAGG
TGTTTCACCTTCGAAAGAAGGAGGATGGGAGGAAAGCGGTGCTAGAAGAGAGAAGAGGAGCGAAAGTGAGTCGAATGGAATTAGATTTGGGAACTTTTGCGTGGGTTAGG
GATTGCCTTATGGCGATAGCGAAGTCGAAGAACCCTCTTGGCTTTTGGAGAAGGAGAAGGTTGAATGCAGCAATTATCTTCTTTCAGGTCCTGAAGAACATAAAAGGAAG
ATTTGGTTTATTATCTATTGAACCTAACCGAGGGAGGAAAACTTCGATTTTCATCCCAGAAGGCACTAAGTTGAAGGGGTGGGGTGCCTTGGAAGCTGCTATGACGAGCC
TTCTCCCTCCCGTGGTTCCGGTTTTGAATCGAAAGCAGGAAAGGATTGCGACTGAAACCGAGGGTAGGGTCATTAAATCTAGGACCTTTGTCGAGGCCGTGAAAGAAGGC
TTGGAGCCAGAAAGAGCGAAGAAGGAGACAGAAAAAGAGGAGAAGGAGAACCCCTCAGAAGAAGTCGATTTTGCCTTTGATTGTTCGACAGCAGTGATCGTTGAACGGAT
GTTTGTTGGTTCGGATTGGGCCGGAATCAGGGACTTGTGCTTGAGCTTAGCAAAGGTTGGTCTATCTCTAAAACCCTTCTGTGTTAATTTGGCAGTGGGACTGTGCGGAA
CTGCGAAGGATGCTGAAGTTCTGGTTAGGGCTGGTTCGCTGAAGCAAGACGACAGATTCTCCATTCACGCGTGGGATTTCAAGATAATTGCAGAAAGAAAATGCCAAATA
TTCGAGGGAGGATGGGTCACGGTTTTAGATGTCCCACCATTTTTGAGATCCATTCAAATGATTTCTTTATTAGCTGATATGTGTGGGGGATTGACAGAGGAAGAAGAAAT
TCTGGTGCCAGATGCAGCAGAAGTCGCAGGTCAGCAGGTTCAGGGTACGAAAAATCACGTGAAGAATGGTAAAAAGGAAGCTGAAATTGGGCTTGAGGCTGGTGGGCTTT
CAGGGCAAAATGTGACTAATAATCTAATGGACCCAACCCTTTACGGAAAAGGAAATCTTATAAGCGAGTGCAAGGGAGATAGCAATGGGCCGACTGAGCTAGTTAATGGG
CCCGAAACTGAACAATTTTTGGAGGCTATTTCTTCAGTTGCCAAGGCCGACAACGACATCGATTTAGATTGGGAGGTTGAACTTAATCATGCGGAGGATATGAGGGCCGA
CGAGGATAATGGCTCCGACCCCTCAGTGGTTAGTTATTCGGAAGATGAATCCTTCCTATCGACTCCGGCAGCCAAAGATGTGGAAATTATGAACTTGAACGTGATTTTTT
CGGAGGAGAATGAATTGGTCCAGCAACTCAACCATCCTCAGAAGGATTGTCAGCAGAATATTTCTACGGCTCTTGATATTCCCACGGAGAGGGATTCTCGAGCTACTCCG
GTAAGAGTGTCTCAAGATGGCTCGGCTACGGGGGATCCGCCTCAACAGTTGATCAAGGTAAACTCGGACAATATCCCTGCCCAGGTACGCTCCCCTCCTTTGGTTCTTTC
ACCTTCTAATTCTTCTGTGAGGGATGGGCGGATGTGTGCGGGGGGGTTAGCCTATCAACATCCTTATTCCTTTGCTTATCCTTCGGGGGAGGGGAGGGGGGAGTTGGTGG
GCCTCAACCATAATTTTGTGCAACCTATCTTTCTAAATTCTTACCAAGCCTCTGGAAGTGCCTTGACTCAACCGACCATCTATTCAGTGGGAGAAGGAATTCCGACCTTT
GCTTCATTAACTTGTGACTCGGGTGATGGAATTGGGGGGAACTTCCATCCTTTCCCAAATGGCCTTGTTAGTAGCATTCCTTTACCTATCTATAGTCCTTCGAACTTTGA
AGGATTCCCAGCCCAAGAAAGGAATATCGGATTCTGGCAACCGGGATGGGCTGCCTTGGCTTCTGTTGGTATAAAAGAGGTTCCCATTAACCAAGACCCCAAGAATGGCT
CGGTGGATGAGGAGAAAGGCAAAACCTATAGTAAAAAGGGAGGAGACTCTAAAAGAGTGGATAGAGAGTTAAGAAAATTGGAATCATCTGTGAATTACGATAGGAGAAAG
GCCTCTAGGGAGGAGACTAAGCGTTATAAGTACAATCGGGAGTTTATTCGTAGCATTTGGGGGATCAGAAAGGTGGAGTGGACAGGCATTGAGTCGGTGGGAGCGTCAGG
AGGGGTGCTTGTTATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTAGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGACAAGGACTTAGGTTGGG
TCACAGGTACGTATGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTGGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTT
AATGTTGTTCGTTCCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTC
TAATGGGAGATTCACCTGGGCTAATAGTAGGGCGCGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGGTC
CTCGAGTTACTTCTGATCATTGGCCCCTAATCCTTACGTCGGGACCTCAGAAATGGGGCCCTTGCCCTTTTCGTTTTGAGAATATGTGGTTGGATCATCCGTCCTTCAAA
TCTTCCTTCCCTTCGTGGTGGAATGTGGAGGCTCCTGGGAAGTGGGAAGGGTATAGGTTTATGGGGAGCTCTCTTTCTCATTGCTTTGGCTTTGTGCGTCCGTTGTCTGA
TCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACTTTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTT
CTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTCAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAATTTTTTATTTGG
CAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAATTTATTTGGGCCTTTTTGTTGCATTCTTTGTCGGATGGCGGAGGAAGACCTCGA
TCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAGAGAGACGATCGATGAGT
TCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGG
TTAGAGAGGGATCCTATTGAGGTTTGGTCCCTTGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGA
TTGGAGTCCCTTCATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGATCTTCGTCCTTACATCCCATTAGCTAGGCATTCTGTTTTGCTGATATTAATACCAATCAAGGCCGCTTTTGATAAGTTTAGTGAGAGCCCTGCTCTAGCAAT
TAGCAAGAAAGAGGTTAAGAATAAACCACCAATTTCTCAACATACCTCTATTTTCAGGACAAATAAGGAGGGTATTATCAGCATATTGTTGGTGAACATCGATTGGAAGG
TGTTTCACCTTCGAAAGAAGGAGGATGGGAGGAAAGCGGTGCTAGAAGAGAGAAGAGGAGCGAAAGTGAGTCGAATGGAATTAGATTTGGGAACTTTTGCGTGGGTTAGG
GATTGCCTTATGGCGATAGCGAAGTCGAAGAACCCTCTTGGCTTTTGGAGAAGGAGAAGGTTGAATGCAGCAATTATCTTCTTTCAGGTCCTGAAGAACATAAAAGGAAG
ATTTGGTTTATTATCTATTGAACCTAACCGAGGGAGGAAAACTTCGATTTTCATCCCAGAAGGCACTAAGTTGAAGGGGTGGGGTGCCTTGGAAGCTGCTATGACGAGCC
TTCTCCCTCCCGTGGTTCCGGTTTTGAATCGAAAGCAGGAAAGGATTGCGACTGAAACCGAGGGTAGGGTCATTAAATCTAGGACCTTTGTCGAGGCCGTGAAAGAAGGC
TTGGAGCCAGAAAGAGCGAAGAAGGAGACAGAAAAAGAGGAGAAGGAGAACCCCTCAGAAGAAGTCGATTTTGCCTTTGATTGTTCGACAGCAGTGATCGTTGAACGGAT
GTTTGTTGGTTCGGATTGGGCCGGAATCAGGGACTTGTGCTTGAGCTTAGCAAAGGTTGGTCTATCTCTAAAACCCTTCTGTGTTAATTTGGCAGTGGGACTGTGCGGAA
CTGCGAAGGATGCTGAAGTTCTGGTTAGGGCTGGTTCGCTGAAGCAAGACGACAGATTCTCCATTCACGCGTGGGATTTCAAGATAATTGCAGAAAGAAAATGCCAAATA
TTCGAGGGAGGATGGGTCACGGTTTTAGATGTCCCACCATTTTTGAGATCCATTCAAATGATTTCTTTATTAGCTGATATGTGTGGGGGATTGACAGAGGAAGAAGAAAT
TCTGGTGCCAGATGCAGCAGAAGTCGCAGGTCAGCAGGTTCAGGGTACGAAAAATCACGTGAAGAATGGTAAAAAGGAAGCTGAAATTGGGCTTGAGGCTGGTGGGCTTT
CAGGGCAAAATGTGACTAATAATCTAATGGACCCAACCCTTTACGGAAAAGGAAATCTTATAAGCGAGTGCAAGGGAGATAGCAATGGGCCGACTGAGCTAGTTAATGGG
CCCGAAACTGAACAATTTTTGGAGGCTATTTCTTCAGTTGCCAAGGCCGACAACGACATCGATTTAGATTGGGAGGTTGAACTTAATCATGCGGAGGATATGAGGGCCGA
CGAGGATAATGGCTCCGACCCCTCAGTGGTTAGTTATTCGGAAGATGAATCCTTCCTATCGACTCCGGCAGCCAAAGATGTGGAAATTATGAACTTGAACGTGATTTTTT
CGGAGGAGAATGAATTGGTCCAGCAACTCAACCATCCTCAGAAGGATTGTCAGCAGAATATTTCTACGGCTCTTGATATTCCCACGGAGAGGGATTCTCGAGCTACTCCG
GTAAGAGTGTCTCAAGATGGCTCGGCTACGGGGGATCCGCCTCAACAGTTGATCAAGGTAAACTCGGACAATATCCCTGCCCAGGTACGCTCCCCTCCTTTGGTTCTTTC
ACCTTCTAATTCTTCTGTGAGGGATGGGCGGATGTGTGCGGGGGGGTTAGCCTATCAACATCCTTATTCCTTTGCTTATCCTTCGGGGGAGGGGAGGGGGGAGTTGGTGG
GCCTCAACCATAATTTTGTGCAACCTATCTTTCTAAATTCTTACCAAGCCTCTGGAAGTGCCTTGACTCAACCGACCATCTATTCAGTGGGAGAAGGAATTCCGACCTTT
GCTTCATTAACTTGTGACTCGGGTGATGGAATTGGGGGGAACTTCCATCCTTTCCCAAATGGCCTTGTTAGTAGCATTCCTTTACCTATCTATAGTCCTTCGAACTTTGA
AGGATTCCCAGCCCAAGAAAGGAATATCGGATTCTGGCAACCGGGATGGGCTGCCTTGGCTTCTGTTGGTATAAAAGAGGTTCCCATTAACCAAGACCCCAAGAATGGCT
CGGTGGATGAGGAGAAAGGCAAAACCTATAGTAAAAAGGGAGGAGACTCTAAAAGAGTGGATAGAGAGTTAAGAAAATTGGAATCATCTGTGAATTACGATAGGAGAAAG
GCCTCTAGGGAGGAGACTAAGCGTTATAAGTACAATCGGGAGTTTATTCGTAGCATTTGGGGGATCAGAAAGGTGGAGTGGACAGGCATTGAGTCGGTGGGAGCGTCAGG
AGGGGTGCTTGTTATGTGGGATGGTAATTCTGTTAACTGTTTGGAGGTGATGCTAGGTGTCTTCTCTGTTTCTATCAAGATTAAATGGAAGGACAAGGACTTAGGTTGGG
TCACAGGTACGTATGGCCCGCCCAGGCCCAAAGGTAGGCAGGAGTTTTGGAATGAGCTTGGGGCCTTGTATGGGTTATGTGGGCATCATTGGTGCATTTTGGGTGACTTT
AATGTTGTTCGTTCCCCTTCAGAAAAGGCTTCGGGAGGGAGAGCTTCGAAGTCGATAAAGTCTTTTAATGAGTGGATTGAGGACTGCAGCTTTTTTGACCCCCCTCTTTC
TAATGGGAGATTCACCTGGGCTAATAGTAGGGCGCGCAGTAGGATCGATAGAGCTCTCTGCTCTAAGGGTTGGATGGATACCTTCCATGGTGTCAGACAATCCTTAGGTC
CTCGAGTTACTTCTGATCATTGGCCCCTAATCCTTACGTCGGGACCTCAGAAATGGGGCCCTTGCCCTTTTCGTTTTGAGAATATGTGGTTGGATCATCCGTCCTTCAAA
TCTTCCTTCCCTTCGTGGTGGAATGTGGAGGCTCCTGGGAAGTGGGAAGGGTATAGGTTTATGGGGAGCTCTCTTTCTCATTGCTTTGGCTTTGTGCGTCCGTTGTCTGA
TCGTGAAACAACGGACCTCGTGACTCTCCTTTCTTTGATTGGGGAAATCGCTTTTAGTACCACTAGGAAAGACTTTCGAGTCTGGAGTCCCGACCCTTCCCTCGGGTTTT
CTTGTCGATCCTTCTTCCGATGCCTTTTGGACCCTGTTTCCTCTCAGCCGTCCATTTTCTCTTTATTGTGGAAGGTGAAAGTTCCAAAGAAGGTGCAATTTTTTATTTGG
CAGGTGATCCATGGAAGAGTTAATACTCTTGATCGGCTGTCCAGAAAGATTCCTAATTTATTTGGGCCTTTTTGTTGCATTCTTTGTCGGATGGCGGAGGAAGACCTCGA
TCATATGTTATGGAACTGCGCTTTTGCTAGGACAGTGTGGGATGAGTTCTTTGGCTCGTTCGGGTTGCAGTTTGCCAGACACAGAGGCCTCAGAGAGACGATCGATGAGT
TCCTTCCCCATCCTCCCTTTAGGGAGCAAGGAAAGTTTTTGTGGCAAGCTGGGATTTGTGCTATTATTTGGGGGTTGTGGGGTGAGAGAAACAATAGAACTTTTAGAGGG
TTAGAGAGGGATCCTATTGAGGTTTGGTCCCTTGTTAAATATAATGTTTCTCTTTGGGCGTCGGTGACGCGTTTATTTTGTAATTATTCCTTAGGTCTCATCATTTTGGA
TTGGAGTCCCTTCATTTAA
Protein sequenceShow/hide protein sequence
MEDLRPYIPLARHSVLLILIPIKAAFDKFSESPALAISKKEVKNKPPISQHTSIFRTNKEGIISILLVNIDWKVFHLRKKEDGRKAVLEERRGAKVSRMELDLGTFAWVR
DCLMAIAKSKNPLGFWRRRRLNAAIIFFQVLKNIKGRFGLLSIEPNRGRKTSIFIPEGTKLKGWGALEAAMTSLLPPVVPVLNRKQERIATETEGRVIKSRTFVEAVKEG
LEPERAKKETEKEEKENPSEEVDFAFDCSTAVIVERMFVGSDWAGIRDLCLSLAKVGLSLKPFCVNLAVGLCGTAKDAEVLVRAGSLKQDDRFSIHAWDFKIIAERKCQI
FEGGWVTVLDVPPFLRSIQMISLLADMCGGLTEEEEILVPDAAEVAGQQVQGTKNHVKNGKKEAEIGLEAGGLSGQNVTNNLMDPTLYGKGNLISECKGDSNGPTELVNG
PETEQFLEAISSVAKADNDIDLDWEVELNHAEDMRADEDNGSDPSVVSYSEDESFLSTPAAKDVEIMNLNVIFSEENELVQQLNHPQKDCQQNISTALDIPTERDSRATP
VRVSQDGSATGDPPQQLIKVNSDNIPAQVRSPPLVLSPSNSSVRDGRMCAGGLAYQHPYSFAYPSGEGRGELVGLNHNFVQPIFLNSYQASGSALTQPTIYSVGEGIPTF
ASLTCDSGDGIGGNFHPFPNGLVSSIPLPIYSPSNFEGFPAQERNIGFWQPGWAALASVGIKEVPINQDPKNGSVDEEKGKTYSKKGGDSKRVDRELRKLESSVNYDRRK
ASREETKRYKYNREFIRSIWGIRKVEWTGIESVGASGGVLVMWDGNSVNCLEVMLGVFSVSIKIKWKDKDLGWVTGTYGPPRPKGRQEFWNELGALYGLCGHHWCILGDF
NVVRSPSEKASGGRASKSIKSFNEWIEDCSFFDPPLSNGRFTWANSRARSRIDRALCSKGWMDTFHGVRQSLGPRVTSDHWPLILTSGPQKWGPCPFRFENMWLDHPSFK
SSFPSWWNVEAPGKWEGYRFMGSSLSHCFGFVRPLSDRETTDLVTLLSLIGEIAFSTTRKDFRVWSPDPSLGFSCRSFFRCLLDPVSSQPSIFSLLWKVKVPKKVQFFIW
QVIHGRVNTLDRLSRKIPNLFGPFCCILCRMAEEDLDHMLWNCAFARTVWDEFFGSFGLQFARHRGLRETIDEFLPHPPFREQGKFLWQAGICAIIWGLWGERNNRTFRG
LERDPIEVWSLVKYNVSLWASVTRLFCNYSLGLIILDWSPFI