; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg001802 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg001802
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionC2H2-like zinc finger protein
Genome locationscaffold10:860329..860802
RNA-Seq ExpressionSpg001802
SyntenySpg001802
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588875.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. sororia]6.6e-6586.42Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQTTASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTA---ATASTSPDDLSPNADAAVEHVTIDLTLRL
         T  A AP+AL DEHW    NHYRGTTTTA   A+AS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTA---ATASTSPDDLSPNADAAVEHVTIDLTLRL

KAG7022634.1 Zinc finger protein KNUCKLES, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-6585.89Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS--PPPPPTTAYHHLAPP
        MADPAIYDFLSQTTASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS  PPPPP T YHHLA P
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS--PPPPPTTAYHHLAPP

Query:  SATAPAPAPAALLDEHWSFHQNHYRGTTTTA---ATASTSPDDLSPNADAAVEHVTIDLTLRL
        S T  A AP+AL DEHW    NHYRGTTTTA   A+AS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  SATAPAPAPAALLDEHWSFHQNHYRGTTTTA---ATASTSPDDLSPNADAAVEHVTIDLTLRL

XP_022928226.1 protein LATE FLOWERING-like [Cucurbita moschata]5.6e-6486.79Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQTTASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
         T  A AP+AL DEHW    NHYRGTTT   TAS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

XP_022989523.1 protein LATE FLOWERING-like [Cucurbita maxima]1.1e-6487.42Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQTTASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
        AT  A AP+AL DEHW    NHYRGTTTT A+AS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

XP_023530190.1 zinc finger protein 7-like [Cucurbita pepo subsp. pepo]2.3e-6584.66Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHLAPPSA
        MADPAIYDFLSQT ASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSL HS PPPP T YHHLA PSA
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHLAPPSA

Query:  TAPAPAPAALLDEHWSFHQNHYRGTTTT-----AATASTSPDDLSPNADAAVEHVTIDLTLRL
        TAPAP+P  L DEHW    NHYRGTTTT     +A+AS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  TAPAPAPAALLDEHWSFHQNHYRGTTTT-----AATASTSPDDLSPNADAAVEHVTIDLTLRL

TrEMBL top hitse value%identityAlignment
A0A6J1DQT0 zinc finger protein 61.9e-4168.75Show/hide
Query:  MADPAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHL--GSLQHSPPPPPTTAYHHLAPPS
        MADPAIYDFLSQTT     PK SRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK F S++LH     + +SPPPP         PPS
Subjt:  MADPAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHL--GSLQHSPPPPPTTAYHHLAPPS

Query:  ATAPAPAPAALLDEHWSF-HQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
        A +PA A A+ LDEHW   HQNH+R      ++AST  D LSPNAD AVE+VTIDLTLRL
Subjt:  ATAPAPAPAALLDEHWSF-HQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

A0A6J1EJQ6 protein LATE FLOWERING-like2.7e-6486.79Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQTTASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
         T  A AP+AL DEHW    NHYRGTTT   TAS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

A0A6J1F843 protein LATE FLOWERING-like3.5e-5675.9Show/hide
Query:  MADPAIYDFLSQ-TTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHL-----
        MADPAIYDFL+Q TTASNSAPK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL   PPP  TT +HHL     
Subjt:  MADPAIYDFLSQ-TTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHL-----

Query:  -APPSATAPAPAPAALLDEHWSFHQNHYRG--TTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
         AP     P PAPA  L +HW F+QNHY    TTT +A+AS SPD LSPNAD AVEHVTIDLTLRL
Subjt:  -APPSATAPAPAPAALLDEHWSFHQNHYRG--TTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

A0A6J1J5R2 protein LATE FLOWERING-like4.3e-5476.51Show/hide
Query:  MADPAIYDFLSQ-TTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTT--AYHHLAPP
        MADPAIYDFL+Q TTASNSAPK SRK QSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAF SEILHLGSL   PP P TT   +HHL  P
Subjt:  MADPAIYDFLSQ-TTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTT--AYHHLAPP

Query:  SATAPA----PAPAALLDEHWSFHQNHYRG--TTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
           APA    PAPA  L +HW F+QNHY    TTTT A+AS SPD LSPN D AVEHVTIDLTLRL
Subjt:  SATAPA----PAPAALLDEHWSFHQNHYRG--TTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

A0A6J1JQI7 protein LATE FLOWERING-like5.4e-6587.42Show/hide
Query:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS
        MADPAIYDFLSQTTASNS PK TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK FTSEILHLGSLQHS PPPPP T YHHLA PS
Subjt:  MADPAIYDFLSQTTASNSAPK-TSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHS-PPPPPTTAYHHLAPPS

Query:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL
        AT  A AP+AL DEHW    NHYRGTTTT A+AS SP+DLSPNADAAVEHVTIDLTLRL
Subjt:  ATAPAPAPAALLDEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL

SwissProt top hitse value%identityAlignment
Q39263 Zinc finger protein 46.9e-0950.85Show/hide
Query:  LSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++ S S+    ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Q39266 Zinc finger protein 71.5e-0841.41Show/hide
Query:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAP
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A               +TS  L    H G L H  S P P  + +HH      T P
Subjt:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAP

Q42485 Zinc finger protein 19.0e-0953.85Show/hide
Query:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

Q9FFX4 Zinc finger protein KNUCKLES3.2e-1451.85Show/hide
Query:  PAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP
        P+   F+      +S+ + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L +SPP
Subjt:  PAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP

Q9FKA9 Protein LATE FLOWERING7.4e-1164.58Show/hide
Query:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        K + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A
Subjt:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

Arabidopsis top hitse value%identityAlignment
AT1G24625.1 zinc finger protein 71.1e-0941.41Show/hide
Query:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAP
        KS    ++ R+F C YC RKFY+SQALGGHQNAHKRER  +++A               +TS  L    H G L H  S P P  + +HH      T P
Subjt:  KSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA---------------FTSEIL----HLGSLQH--SPPPPPTTAYHHLAPPSATAP

AT1G66140.1 zinc finger protein 44.9e-1050.85Show/hide
Query:  LSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        L  ++ S S+    ++ Q    S R+F C YC RKFY+SQALGGHQNAHKRER  +++A
Subjt:  LSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA

AT1G80730.1 zinc-finger protein 16.4e-1053.85Show/hide
Query:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK
        S+S+    +  Q Q +  R+F C YC RKFY+SQALGGHQNAHKRER  +++
Subjt:  SNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRK

AT5G14010.1 C2H2 and C2HC zinc fingers superfamily protein2.3e-1551.85Show/hide
Query:  PAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP
        P+   F+      +S+ + S  S +  +S R+FPC YCPRKFYTSQALGGHQNAHKRERAA+R+       +LG L +SPP
Subjt:  PAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPP

AT5G48890.1 C2H2-like zinc finger protein5.3e-1264.58Show/hide
Query:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA
        K + K+    SS RIFPCL+C RKF++SQALGGHQNAHK+ER A+R+A
Subjt:  KTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATCCTGCCATTTACGACTTCCTCAGCCAAACCACTGCTTCCAATTCTGCGCCGAAAACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCTCGCATTTTCCC
ATGCCTCTACTGCCCTCGCAAATTCTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAGAGAGCCGCCTCTCGTAAGGCCTTCACCTCTGAAATTC
TTCACCTCGGTTCGCTTCAACACTCGCCGCCGCCTCCGCCGACGACCGCTTACCACCATCTTGCGCCACCGTCTGCCACGGCGCCGGCTCCGGCTCCAGCGGCGCTTCTC
GACGAGCATTGGTCGTTCCATCAGAATCACTACAGAGGTACTACTACCACCGCGGCCACCGCCTCCACCTCGCCGGACGATCTCTCTCCGAATGCCGATGCTGCCGTCGA
ACACGTAACCATCGACCTCACTCTTCGCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATCCTGCCATTTACGACTTCCTCAGCCAAACCACTGCTTCCAATTCTGCGCCGAAAACCTCCAGAAAATCTCAGTCTCAATACTCTTCCTCTCGCATTTTCCC
ATGCCTCTACTGCCCTCGCAAATTCTACACTTCTCAAGCCCTAGGCGGCCACCAAAACGCTCACAAGAGAGAGAGAGCCGCCTCTCGTAAGGCCTTCACCTCTGAAATTC
TTCACCTCGGTTCGCTTCAACACTCGCCGCCGCCTCCGCCGACGACCGCTTACCACCATCTTGCGCCACCGTCTGCCACGGCGCCGGCTCCGGCTCCAGCGGCGCTTCTC
GACGAGCATTGGTCGTTCCATCAGAATCACTACAGAGGTACTACTACCACCGCGGCCACCGCCTCCACCTCGCCGGACGATCTCTCTCCGAATGCCGATGCTGCCGTCGA
ACACGTAACCATCGACCTCACTCTTCGCTTATAA
Protein sequenceShow/hide protein sequence
MADPAIYDFLSQTTASNSAPKTSRKSQSQYSSSRIFPCLYCPRKFYTSQALGGHQNAHKRERAASRKAFTSEILHLGSLQHSPPPPPTTAYHHLAPPSATAPAPAPAALL
DEHWSFHQNHYRGTTTTAATASTSPDDLSPNADAAVEHVTIDLTLRL